DC900357
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900357 vs. ExPASy Swiss-Prot
Match: ACTA_MOUSE (Actin, aortic smooth muscle OS=Mus musculus GN=Acta2 PE=1 SV=1) HSP 1 Score: 266.159 bits (679), Expect = 7.422e-71 Identity = 125/141 (88.65%), Postives = 132/141 (93.62%), Query Frame = 3 Query: 69 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAV 491 M + ED LVCDNG+G+ KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI++NWDDMEKIWHH+FYNELRVAPEEHP LLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAV Sbjct: 1 MCEEEDSTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAV 141
BLAST of DC900357 vs. ExPASy Swiss-Prot
Match: ACTA_HUMAN (Actin, aortic smooth muscle OS=Homo sapiens GN=ACTA2 PE=1 SV=1) HSP 1 Score: 266.159 bits (679), Expect = 7.422e-71 Identity = 125/141 (88.65%), Postives = 132/141 (93.62%), Query Frame = 3 Query: 69 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAV 491 M + ED LVCDNG+G+ KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI++NWDDMEKIWHH+FYNELRVAPEEHP LLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAV Sbjct: 1 MCEEEDSTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAV 141
BLAST of DC900357 vs. ExPASy Swiss-Prot
Match: ACTA_CHICK (Actin, aortic smooth muscle OS=Gallus gallus GN=ACTA2 PE=1 SV=2) HSP 1 Score: 266.159 bits (679), Expect = 7.422e-71 Identity = 125/141 (88.65%), Postives = 132/141 (93.62%), Query Frame = 3 Query: 69 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAV 491 M + ED LVCDNG+G+ KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI++NWDDMEKIWHH+FYNELRVAPEEHP LLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAV Sbjct: 1 MCEEEDSTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAV 141
BLAST of DC900357 vs. ExPASy Swiss-Prot
Match: ACTA_BOVIN (Actin, aortic smooth muscle OS=Bos taurus GN=ACTA2 PE=1 SV=1) HSP 1 Score: 266.159 bits (679), Expect = 7.422e-71 Identity = 125/141 (88.65%), Postives = 132/141 (93.62%), Query Frame = 3 Query: 69 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAV 491 M + ED LVCDNG+G+ KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI++NWDDMEKIWHH+FYNELRVAPEEHP LLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAV Sbjct: 1 MCEEEDSTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAV 141
BLAST of DC900357 vs. ExPASy Swiss-Prot
Match: ACT1_DIPDE (Actin-1/4 OS=Diphyllobothrium dendriticum GN=ACT1 PE=2 SV=1) HSP 1 Score: 266.159 bits (679), Expect = 7.422e-71 Identity = 126/137 (91.97%), Postives = 131/137 (95.62%), Query Frame = 3 Query: 81 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAV 491 E++Q LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYV IQAV Sbjct: 4 EEVQALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVGIQAV 140
BLAST of DC900357 vs. ExPASy Swiss-Prot
Match: ACT_PLAMG (Actin, adductor muscle OS=Placopecten magellanicus PE=2 SV=1) HSP 1 Score: 265.774 bits (678), Expect = 9.694e-71 Identity = 126/137 (91.97%), Postives = 132/137 (96.35%), Query Frame = 3 Query: 81 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAV 491 +++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAV Sbjct: 4 DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAV 140
BLAST of DC900357 vs. ExPASy Swiss-Prot
Match: ACT_MANSE (Actin, muscle OS=Manduca sexta PE=2 SV=1) HSP 1 Score: 265.774 bits (678), Expect = 9.694e-71 Identity = 125/137 (91.24%), Postives = 132/137 (96.35%), Query Frame = 3 Query: 81 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAV 491 +D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAV Sbjct: 4 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAV 140
BLAST of DC900357 vs. ExPASy Swiss-Prot
Match: ACT_HYDAT (Actin, non-muscle 6.2 OS=Hydra attenuata PE=3 SV=1) HSP 1 Score: 265.774 bits (678), Expect = 9.694e-71 Identity = 129/141 (91.49%), Postives = 134/141 (95.04%), Query Frame = 3 Query: 69 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAV 491 MAD E + LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAV Sbjct: 1 MADDE-VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAV 140
BLAST of DC900357 vs. ExPASy Swiss-Prot
Match: ACTM_HELTB (Actin, cytoskeletal OS=Heliocidaris tuberculata PE=3 SV=1) HSP 1 Score: 265.774 bits (678), Expect = 9.694e-71 Identity = 126/137 (91.97%), Postives = 132/137 (96.35%), Query Frame = 3 Query: 81 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAV 491 +++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAV Sbjct: 4 DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAV 140
BLAST of DC900357 vs. ExPASy Swiss-Prot
Match: ACTM_HELER (Actin, cytoskeletal OS=Heliocidaris erythrogramma PE=3 SV=1) HSP 1 Score: 265.774 bits (678), Expect = 9.694e-71 Identity = 126/137 (91.97%), Postives = 132/137 (96.35%), Query Frame = 3 Query: 81 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAV 491 +++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAV Sbjct: 4 DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAV 140 The following BLAST results are available for this feature:
BLAST of DC900357 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 444
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900357 ID=DC900357; Name=DC900357; organism=Citrus sinensis; type=EST; length=547bpback to top |