DC900357
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900357 vs. ExPASy Swiss-Prot
Match: ACL7B_HUMAN (Actin-like protein 7B OS=Homo sapiens GN=ACTL7B PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 2.860e-22 Identity = 51/135 (37.78%), Postives = 79/135 (58.52%), Query Frame = 3 Query: 87 IQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAV 491 I+ ++ D G+ K G+AG+ P S VG+ G +K VG E + L L P++HGIV +WD ++ IW + F +++ PEEH VL+++ PL+P +NREK ++MFETF PAM+V Q++ Sbjct: 49 IKAVIIDLGSQYCKCGYAGEPRPTYFISSTVGKRCPEAADAGDTRKWTLVGHELLNTEAPLKLVNPLKHGIVVDWDCVQDIWEYIFRTAMKILPEEHAVLVSDPPLSPSSNREKYAELMFETFGIPAMHVTSQSL 183
BLAST of DC900357 vs. ExPASy Swiss-Prot
Match: ACT1_PSEMZ (Actin-1 (Fragment) OS=Pseudotsuga menziesii PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 6.372e-22 Identity = 45/45 (100.00%), Postives = 45/45 (100.00%), Query Frame = 3 Query: 279 YPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK 413 YPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK Sbjct: 1 YPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK 45
BLAST of DC900357 vs. ExPASy Swiss-Prot
Match: ACTL9_MOUSE (Actin-like protein 9 OS=Mus musculus GN=Actl9 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.087e-21 Identity = 49/132 (37.12%), Postives = 79/132 (59.85%), Query Frame = 3 Query: 96 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAV 491 +V D GTG K GFAG P +I+G + + ++G+ A+S+ + +K PI +GIV +W+ E IW H ++L+VA EHP+L ++ P +P NREK+ ++ FE+ ++PA+YVA Q+V Sbjct: 51 VVIDMGTGTCKVGFAGQSQPTYTVATILGCQPKKQATKDQSELETFIGEAARSRPELRLVK-PIRNGIVVDWEAAELIWRHILEHDLQVATHEHPLLFSDPPFSPATNREKLVEVAFESLHSPALYVASQSV 181
BLAST of DC900357 vs. ExPASy Swiss-Prot
Match: ACL7B_MACFA (Actin-like protein 7B OS=Macaca fascicularis GN=ACTL7B PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.087e-21 Identity = 51/135 (37.78%), Postives = 78/135 (57.78%), Query Frame = 3 Query: 87 IQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAV 491 I+ +V D G+ K G+AG+ P S VG+ G +K VG E + L L P++HGIV +WD ++ IW + F +++ PEEH VL+++ PL+P +NREK ++MF TF PAM+V Q++ Sbjct: 49 IKAVVIDLGSQYCKCGYAGEPRPTYFISSTVGKRCPEAADAGDTRKGTLVGHELLNTETPLKLVNPLKHGIVVDWDCVQDIWEYIFRTAMKILPEEHAVLVSDPPLSPSSNREKYAELMFGTFGIPAMHVTSQSL 183
BLAST of DC900357 vs. ExPASy Swiss-Prot
Match: ACTL9_HUMAN (Actin-like protein 9 OS=Homo sapiens GN=ACTL9 PE=2 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 1.419e-21 Identity = 52/132 (39.39%), Postives = 75/132 (56.82%), Query Frame = 3 Query: 96 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAV 491 +V D GTG K GFAG +P +I+G G ++G+ A+ LTL P+ GIV +WD E IW H ++LRVA +HP+L ++ P +P NREK+ ++ FE+ +PAMYVA Q+V Sbjct: 52 VVIDMGTGTCKVGFAGQASPTYTVATILGCQPKKPATSGQSGLQTFIGEAARVLPE-LTLVQPLRSGIVVDWDAAELIWRHLLEHDLRVATHDHPLLFSDPPFSPATNREKLVEVAFESLRSPAMYVASQSV 182
BLAST of DC900357 vs. ExPASy Swiss-Prot
Match: ARP4A_ARATH (Actin-related protein 4A OS=Arabidopsis thaliana GN=ARP4A PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.017e-19 Identity = 50/136 (36.76%), Postives = 77/136 (56.62%), Query Frame = 3 Query: 69 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVG---------------MGQKDAYVGDEAQS-KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 428 M G+++ +V D G+ KAG+AG+DAP+AVFPS+VG G+ + G++ Y G +A + +R + + P + GIV++WD ++ +W H F N L + P EHP+LL E PLN + REK Sbjct: 1 MYGGDEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTEDAKESDKEKGKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLNSQQQREK 136
BLAST of DC900357 vs. ExPASy Swiss-Prot
Match: ACL6B_RAT (Actin-like protein 6B OS=Rattus norvegicus GN=Actl6b PE=1 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 1.918e-18 Identity = 50/146 (34.25%), Postives = 84/146 (57.53%), Query Frame = 3 Query: 78 GEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVG--RPRHTGVMVGMGQKDA-----YVGDEA-QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAV 491 G+++ LV D G+ V+AG+AG+D P+A FP+ VG G + G+K+ ++ A R + P+++G++ +W+ I HT+ ++ P HPVL++EAP N +A REK+T++MFE +N PA ++ AV Sbjct: 8 GDEVGALVFDIGSFSVRAGYAGEDCPKADFPTTVGLLAAEEGGGLELEGEKEKKGKIFHIDTNALHVPRDGAEVMSPLKNGMIEDWECFRAILDHTYSKHVKSEPNLHPVLMSEAPWNTRAKREKLTELMFEQYNIPAFFLCKTAV 153
BLAST of DC900357 vs. ExPASy Swiss-Prot
Match: ACL6B_MOUSE (Actin-like protein 6B OS=Mus musculus GN=Actl6b PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 1.918e-18 Identity = 50/146 (34.25%), Postives = 84/146 (57.53%), Query Frame = 3 Query: 78 GEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVG--RPRHTGVMVGMGQKDA-----YVGDEA-QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAV 491 G+++ LV D G+ V+AG+AG+D P+A FP+ VG G + G+K+ ++ A R + P+++G++ +W+ I HT+ ++ P HPVL++EAP N +A REK+T++MFE +N PA ++ AV Sbjct: 8 GDEVGALVFDIGSFSVRAGYAGEDCPKADFPTTVGLLAAEEGGGLELEGEKEKKGKIFHIDTNALHVPRDGAEVMSPLKNGMIEDWECFRAILDHTYSKHVKSEPNLHPVLMSEAPWNTRAKREKLTELMFEQYNIPAFFLCKTAV 153
BLAST of DC900357 vs. ExPASy Swiss-Prot
Match: ACL6B_BOVIN (Actin-like protein 6B OS=Bos taurus GN=ACTL6B PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 1.918e-18 Identity = 50/146 (34.25%), Postives = 84/146 (57.53%), Query Frame = 3 Query: 78 GEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVG--RPRHTGVMVGMGQKDA-----YVGDEA-QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAV 491 G+++ LV D G+ V+AG+AG+D P+A FP+ VG G + G+K+ ++ A R + P+++G++ +W+ I HT+ ++ P HPVL++EAP N +A REK+T++MFE +N PA ++ AV Sbjct: 8 GDEVGALVFDIGSFSVRAGYAGEDCPKADFPTTVGLLAAEEGGGLELEGEKEKKGKIFHIDTNALHVPRDGAEVMSPLKNGMIEDWECFRAILDHTYSKHVKSEPNLHPVLMSEAPWNTRAKREKLTELMFEQYNIPAFFLCKTAV 153
BLAST of DC900357 vs. ExPASy Swiss-Prot
Match: ACL6B_HUMAN (Actin-like protein 6B OS=Homo sapiens GN=ACTL6B PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 3.272e-18 Identity = 50/146 (34.25%), Postives = 83/146 (56.85%), Query Frame = 3 Query: 78 GEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVG--RPRHTGVMVGMGQKDA-----YVGDEA-QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAV 491 G+++ LV D G+ V+AG+AG+D P+A FP+ VG G + G K+ ++ A R + P+++G++ +W+ I HT+ ++ P HPVL++EAP N +A REK+T++MFE +N PA ++ AV Sbjct: 8 GDEVGALVFDIGSFSVRAGYAGEDCPKADFPTTVGLLAAEEGGGLELEGDKEKKGKIFHIDTNALHVPRDGAEVMSPLKNGMIEDWECFRAILDHTYSKHVKSEPNLHPVLMSEAPWNTRAKREKLTELMFEQYNIPAFFLCKTAV 153 The following BLAST results are available for this feature:
BLAST of DC900357 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 444
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DC900357 ID=DC900357; Name=DC900357; organism=Citrus sinensis; type=EST; length=547bpback to top |