DC900348
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900348 vs. ExPASy Swiss-Prot
Match: EF1G_CAEEL (Probable elongation factor 1-gamma OS=Caenorhabditis elegans GN=F17C11.9 PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 6.398e-20 Identity = 47/149 (31.54%), Postives = 85/149 (57.05%), Query Frame = 3 Query: 249 ILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQVIPQFIMYEC-YDMELYDWKKVDINDEAQKERVSQMIEDHEPFEGEALLDAKCFK 692 +LD +KR YSN T + AI FW+ +D + +S+W C+YKY ++ T++F++ N + G QR++ +K AF M++ G++ + G+W+++G + + + D E Y W K+D +A K+ V++ + F G+ K FK Sbjct: 252 VLDNFKRSYSNEDTATK--AIPHFWENFDADNWSIWKCEYKYPEDLTLAFMSCNLINGMYQRLEKLKKNAFASMILFGTDNNSTISGIWVWKGDKLAFELSPDWQVDYESYTWTKLDAKSDATKKEVNEYLMWEGDFGGKKFNQGKIFK 398
BLAST of DC900348 vs. ExPASy Swiss-Prot
Match: EF1G_BOVIN (Elongation factor 1-gamma OS=Bos taurus GN=EEF1G PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 8.356e-20 Identity = 54/154 (35.06%), Postives = 85/154 (55.19%), Query Frame = 3 Query: 240 SKMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQVIPQFIMYEC-YDMELYDWKKVDINDEAQKERVSQMIEDHEPFE--GEALLDAKCFK 692 S +LDE+KR YSN T VA+ FWD +D +G+SLW+ +Y++ +E T +F++ N + G QR+D RK AF +++ G+ + G+W FRGQ + + + D E Y W+K+D E + V + F+ G+A K FK Sbjct: 289 STFVLDEFKRKYSNEDT--LSVALPYFWDHFDKDGWSLWYSEYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFASVILFGTNNSSSISGVWDFRGQELAFPLSPDWQVDYESYTWRKLDPGSEETQTLVREYFCWEGAFQHVGKAFNQGKIFK 440
BLAST of DC900348 vs. ExPASy Swiss-Prot
Match: EF1G_DROME (Elongation factor 1-gamma OS=Drosophila melanogaster GN=Ef1gamma PE=1 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 2.431e-19 Identity = 48/127 (37.80%), Postives = 76/127 (59.84%), Query Frame = 3 Query: 255 DEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQVIPQFIMYEC-YDMELYDWKKVDINDEAQKERVSQ 632 D++KR+YSN +I F+D +D E YS+WF +YKYN+E + F++ N + G QR+D RK AF + + G + + G+W++RGQ + + + D E+YDWKK+D E K+ V+Q Sbjct: 287 DDFKRVYSNED---EAKSIPYFFDKFDAENYSIWFGEYKYNEELSKVFMSCNLITGMFQRLDKMRKAAFASVCLFGEDGNSTISGIWVWRGQDLAFTLSPDWQIDYEVYDWKKLDAKSEETKKLVTQ 410
BLAST of DC900348 vs. ExPASy Swiss-Prot
Match: EF1G_ARTSA (Elongation factor 1-gamma OS=Artemia salina PE=1 SV=3) HSP 1 Score: 95.1301 bits (235), Expect = 5.416e-19 Identity = 46/128 (35.94%), Postives = 75/128 (58.59%), Query Frame = 3 Query: 252 LDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQVIPQFIMYEC-YDMELYDWKKVDINDEAQKERVSQ 632 +D++KR YSN N +I FW+ +D E YS+W+ +YKY DE +++ N + G QR++ RK AF + V G + + G+W++RGQ + + + D E YDWKK+D + + K+ V+Q Sbjct: 285 MDDFKRFYSN---NEETKSIPYFWEKFDKENYSIWYSEYKYQDELAKVYMSCNLITGMFQRIEKMRKQAFASVCVFGEDNDSSISGIWVWRGQDLAFKLSPDWQIDYESYDWKKLDPDAQETKDLVTQ 409
BLAST of DC900348 vs. ExPASy Swiss-Prot
Match: EF1G_SCHPO (Elongation factor 1-gamma OS=Schizosaccharomyces pombe GN=tef3 PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.881e-17 Identity = 53/149 (35.57%), Postives = 79/149 (53.02%), Query Frame = 3 Query: 252 LDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKY-NDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRG-QVIPQFIMYECYDMELYDWKKVDINDEAQKERVSQMIEDHEPFEGEALLDAKCFK 692 ++E+KR+YSN T R A+ F++ +DPE YS+W DY Y D F+T N +GGF QR++ +RKY FG +VIG + G ++ +G +P F + D Y + K+DIN K + +P EG + D K K Sbjct: 265 IEEYKRVYSNQDT--RSGALPWFFEHFDPENYSVWKVDYSYPEDLKQPVFMTNNLIGGFFQRLEASRKYIFGCCVVIGENGDNTITGAFVIKGHDYVPAFDV--APDWGSYTFTKLDINKPEDKAFIEDAWAWDKPIEGREVADGKVCK 409 The following BLAST results are available for this feature:
BLAST of DC900348 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DC900348 ID=DC900348; Name=DC900348; organism=Citrus sinensis; type=EST; length=873bpback to top |