DC900345

Overview
NameDC900345
Unique NameDC900345
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1136
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5659 contig Csv1_Contig5659:1..1137. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: AAPK2_MOUSE (5'-AMP-activated protein kinase catalytic subunit alpha-2 OS=Mus musculus GN=Prkaa2 PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 3.460e-14
Identity = 40/111 (36.04%), Postives = 66/111 (59.46%), Query Frame = 1
Query:    1 INNKGYDGAKADLWSCGVILYVLMAGYLPFEESNLMALYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYKPPSFEQPNIDLDDVDSIFNESM 333
            I+ + Y G + D+WSCGVILY L+ G LPF++ ++  L+KKI    F  P + + S   L+  +L  +P+ R T+ ++ E+EWFK+    PS+  P     D + I +E++
Sbjct:  185 ISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPDYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQDL--PSYLFPEDPSYDANVIVDEAV 293          
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: SNF1_YEAST (Carbon catabolite-derepressing protein kinase OS=Saccharomyces cerevisiae GN=SNF1 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 4.519e-14
Identity = 43/114 (37.72%), Postives = 67/114 (58.77%), Query Frame = 1
Query:    1 INNKGYDGAKADLWSCGVILYVLMAGYLPFEESNLMALYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYKPPSFEQPNIDLDDVDSIFNESMDSR 342
            I+ K Y G + D+WSCGVILYV++   LPF++ ++  L+K I    +  P + S  A  LI R+L  NP+ RI++ E+++++WFK     P +  P  DL       NE+ DS+
Sbjct:  223 ISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVDL--PEYLLPP-DLKPHPEEENENNDSK 333          
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: PAR1_CAEEL (Serine/threonine-protein kinase par-1 OS=Caenorhabditis elegans GN=par-1 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 4.519e-14
Identity = 52/185 (28.11%), Postives = 91/185 (49.19%), Query Frame = 1
Query:    4 NNKGYDGAKADLWSCGVILYVLMAGYLPFEESNLMALYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYK----PPSFEQPNIDLDD-------------------VDSIFNESMDSRN----LVVERREEGPVAPLTMNAFELISTSQGLNLSSLFEKQMGLVKRE 477
            + K YDG + D+WS GVILY L++G LPF+  NL  L +++ +  ++ P + ST  + L+ + L  NP  R ++  ++++ W   GY+     P  E P   +D+                   ++S+  E  +  +    L+ ER+ +   + +TM A  L+S S     SSL +   G++ RE
Sbjct:  339 SGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLVINPQRRSSLDNIMKDRWMNVGYEDDELKPFIEPPKDQIDEQRIEKLIQIFQLGFNKAAILESVEKEKFEDIHATYLLLGERKSDMDASEITM-AQSLLSHSSINVSSSLGQHPAGVITRE 522          
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: CDR1_SCHPO (Mitosis inducer protein kinase cdr1 OS=Schizosaccharomyces pombe GN=cdr1 PE=1 SV=3)

HSP 1 Score: 79.337 bits (194), Expect = 4.519e-14
Identity = 42/116 (36.21%), Postives = 66/116 (56.90%), Query Frame = 1
Query:    1 INNKGYDGAKADLWSCGVILYVLMAGYLPFEESNLMALYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYKPPSFEQ-----PNIDLDDVDSIFNESM 333
            +++K Y GA AD+WSCGVILY L++  LPF   N   +Y KI    +  P   S++A+ L+ R+LD NP TRIT+ EV  + +        S +      P++ +D++D +  + M
Sbjct:  175 VSHKPYRGAPADVWSCGVILYSLLSNKLPFGGQNTDVIYNKIRHGAYDLPSSISSAAQDLLHRMLDVNPSTRITIPEVFSHPFLMGCTSLSSMDSTTPPTPSLSIDEIDPLVVDCM 290          
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: SIK3_HUMAN (Serine/threonine-protein kinase SIK3 OS=Homo sapiens GN=SIK3 PE=1 SV=3)

HSP 1 Score: 78.9518 bits (193), Expect = 5.903e-14
Identity = 36/92 (39.13%), Postives = 57/92 (61.96%), Query Frame = 1
Query:   10 KGYDGAKADLWSCGVILYVLMAGYLPFEESNLMALYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYKPPSFEQ 285
            K YDG K D+WS GV+LYVL+ G LPF+ S L  L  ++    F+ P + ST  + LI  +L  +P  R++M ++ +++W K G   P+F++
Sbjct:  179 KEYDGPKVDIWSLGVVLYVLVCGALPFDGSTLQNLRARVLSGKFRIPFFMSTECEHLIRHMLVLDPNKRLSMEQICKHKWMKLGDADPNFDR 270          
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: MARK4_MOUSE (MAP/microtubule affinity-regulating kinase 4 OS=Mus musculus GN=Mark4 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 5.903e-14
Identity = 36/106 (33.96%), Postives = 61/106 (57.55%), Query Frame = 1
Query:   10 KGYDGAKADLWSCGVILYVLMAGYLPFEESNLMALYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYKPPS---FEQPNIDLDDVDSI 318
            K YDG + D+WS GVILY L++G LPF+  NL  L +++ +  ++ P + ST  + ++ R L  NP  R T+ ++++++W   GY+      + +P  D  D   I
Sbjct:  230 KKYDGPEVDIWSLGVILYTLVSGSLPFDGHNLKELRERVLRGKYRVPFYMSTDCESILRRFLVLNPAKRCTLEQIMKDKWINIGYEGEELKPYTEPEEDFGDTKRI 335          
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: MARK4_HUMAN (MAP/microtubule affinity-regulating kinase 4 OS=Homo sapiens GN=MARK4 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 5.903e-14
Identity = 36/106 (33.96%), Postives = 61/106 (57.55%), Query Frame = 1
Query:   10 KGYDGAKADLWSCGVILYVLMAGYLPFEESNLMALYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYKPPS---FEQPNIDLDDVDSI 318
            K YDG + D+WS GVILY L++G LPF+  NL  L +++ +  ++ P + ST  + ++ R L  NP  R T+ ++++++W   GY+      + +P  D  D   I
Sbjct:  230 KKYDGPEVDIWSLGVILYTLVSGSLPFDGHNLKELRERVLRGKYRVPFYMSTDCESILRRFLVLNPAKRCTLEQIMKDKWINIGYEGEELKPYTEPEEDFGDTKRI 335          
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: SIK3_MOUSE (Serine/threonine-protein kinase SIK3 OS=Mus musculus GN=Sik3 PE=1 SV=3)

HSP 1 Score: 78.5666 bits (192), Expect = 7.709e-14
Identity = 36/92 (39.13%), Postives = 56/92 (60.87%), Query Frame = 1
Query:   10 KGYDGAKADLWSCGVILYVLMAGYLPFEESNLMALYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYKPPSFEQ 285
            K YDG K D+WS GV+LYVL+ G LPF+ S L  L  ++    F+ P + ST  + LI  +L  +P  R++M ++  ++W K G   P+F++
Sbjct:  179 KEYDGPKVDIWSLGVVLYVLVCGALPFDGSTLQNLRARVLSGKFRIPFFMSTECEHLIRHMLVLDPNKRLSMEQICRHKWMKLGDADPNFDR 270          
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: AAPK2_CAEEL (5'-AMP-activated protein kinase catalytic subunit alpha-2 OS=Caenorhabditis elegans GN=aak-2 PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 7.709e-14
Identity = 37/109 (33.94%), Postives = 64/109 (58.72%), Query Frame = 1
Query:    1 INNKGYDGAKADLWSCGVILYVLMAGYLPFEESNLMALYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKK---GYKPPSFEQPNIDLDDVDSI 318
            I+ K Y G + D+WSCGVILY L+ G LPF++ ++ +L++KI    F +P +       L+  +L  +P+ R T+ +VI +EWF+K    Y  P   +    + D++++
Sbjct:  256 ISGKLYAGPEVDVWSCGVILYALLCGTLPFDDEHVPSLFRKIKSGVFPTPDFLERPIVNLLHHMLCVDPMKRATIKDVIAHEWFQKDLPNYLFPPINESEASIVDIEAV 364          
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: MRKA_DICDI (Probable serine/threonine-protein kinase MARK-A OS=Dictyostelium discoideum GN=mrkA PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.007e-13
Identity = 42/125 (33.60%), Postives = 70/125 (56.00%), Query Frame = 1
Query:    1 INNKGYDGAKADLWSCGVILYVLMAGYLPFEESNLMALYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYK-------PPSFEQPNIDLD---DVDSIFNESMDSRN 345
            I  K Y+G   D+WS GV+L+VL+ GYLPF+  N + L++KI   ++  P + +   K LISR+L  +P  R TM E+I + W     +         S +  N  L+   +V+++ N+S+++ N
Sbjct:  278 ILRKEYNGPSVDVWSMGVVLFVLVTGYLPFDGDNYVELFQKILAGNYTIPSYLTHECKSLISRMLVVDPDKRATMEEIINHPWLSSTKQIILSTTMTDSLKNLNSCLEQQINVENLLNQSLNNSN 402          
The following BLAST results are available for this feature:
BLAST of DC900345 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 168
Match NameE-valueIdentityDescription
AAPK2_MOUSE3.460e-1436.045'-AMP-activated protein kinase catalytic subunit ... [more]
SNF1_YEAST4.519e-1437.72Carbon catabolite-derepressing protein kinase OS=S... [more]
PAR1_CAEEL4.519e-1428.11Serine/threonine-protein kinase par-1 OS=Caenorhab... [more]
CDR1_SCHPO4.519e-1436.21Mitosis inducer protein kinase cdr1 OS=Schizosacch... [more]
SIK3_HUMAN5.903e-1439.13Serine/threonine-protein kinase SIK3 OS=Homo sapie... [more]
MARK4_MOUSE5.903e-1433.96MAP/microtubule affinity-regulating kinase 4 OS=Mu... [more]
MARK4_HUMAN5.903e-1433.96MAP/microtubule affinity-regulating kinase 4 OS=Ho... [more]
SIK3_MOUSE7.709e-1439.13Serine/threonine-protein kinase SIK3 OS=Mus muscul... [more]
AAPK2_CAEEL7.709e-1433.945'-AMP-activated protein kinase catalytic subunit ... [more]
MRKA_DICDI1.007e-1333.60Probable serine/threonine-protein kinase MARK-A OS... [more]

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Properties
Property NameValue
Genbank descriptionDC900345 VSS Citrus sinensis cDNA clone VS28902 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900345 ID=DC900345; Name=DC900345; organism=Citrus sinensis; type=EST; length=1136bp
ATTAATAATAAAGGCTACGATGGAGCTAAGGCAGATCTCTGGTCTTGCGG
TGTGATTCTTTATGTCTTAATGGCTGGTTACTTGCCTTTTGAAGAATCCA
ATCTGATGGCTTTATATAAGAAGATATTTAAGGCTGACTTCAAGAGTCCT
CCATGGTTCTCGACAAGTGCAAAGAAACTGATCTCAAGAATTTTGGACCC
TAATCCTGTGACACGAATAACGATGGCTGAGGTTATTGAGAATGAGTGGT
TTAAGAAGGGATATAAGCCACCTAGTTTTGAACAACCTAATATTGATCTT
GATGATGTGGATTCTATCTTTAATGAATCGATGGATTCTCGAAACCTTGT
TGTGGAGAGGCGAGAAGAAGGCCCTGTTGCACCTCTCACTATGAATGCGT
TTGAGTTGATCTCCACATCTCAGGGACTCAACCTCAGTTCCCTTTTCGAA
AAGCAAATGGGACTTGTGAAACGAGAAACAAGATTTACATCCAAACGTCC
TGTTAACGAAATTATATCGAAAATTGAGGAAGCTGCATCGCCTTTGGGTT
TTGATGTGAAGAAAAATAATTTCAAGTTGAAGCTTCAAGGGGAAAAAACT
GGACGCAAGGGTCATTTATCTGTTGCAACAGAGATTTTTGAGGTGGCCCC
TTCACTTTACATGGTTGAGCTTCGAAAATCTGGAGGAGATACCTTAGAAT
TTCACAAGTTTTACAAAAACCTTTCGACTGGGCTGAAAGATGTTGTTTGG
AAATCAGGAGATGAAACAATTGTTGAAGGATCTGCAGTCGCTGGTGGCGC
AGGGTCTCAATAGCGGATTTCCTTTCATGACTTGCACTGCTGAATATCTC
CAGCAAATTATATATTGCTTTTGCACCATTGTATCTCAGCTTTGTATTTT
ATCCTCTAGGCCATGTGTTTCCTTCATTTGTGATTCAGAACTCACTTCTC
GTGTACCTTGGTTTGGCTTTTGTGTGGTTTCAGACTTCCAGATGTATCAT
CTCAACGGATATTGAACATAGTCAATTACCTGCAAATTATCAAAAAGAGT
CTCAGTCCACTGTCGTTTTCATTTTGTTTGTTTTTAGTGACTTGTCTATG
GACCAGAAAATTCAATAAAAAGAATATATTGTAAAA
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