DC900342
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPC_CHLTR (Probable ATP-dependent Clp protease ATP-binding subunit OS=Chlamydia trachomatis GN=clpC PE=3 SV=1) HSP 1 Score: 288.115 bits (736), Expect = 7.024e-77 Identity = 141/325 (43.38%), Postives = 220/325 (67.69%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETF--PKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEFKXXXXXXXXXXXXAFSNGQLPQQKLVFRRLDTSSDASAADNQEAFSQTA 1029 V+GQ AV S+ AI+RSR G+ DP+RP+ SF+F+GPTGVGKT LA+ +A MF E++L+++DMSEYMEK A ++++G+PPGYVG+EEGG LTE VRRRPY V+LFDEIEKAH D+ ++ LQIL+ GR+TDS GR + F NT+IIMTSN+G+ I + F Y IK+++ A + +PEF+NR+DE ++F+PL+++ +S I+ L+++++ R+ + +M + + D+ I L + G+ P GARP++RV++QY+E+ LA+ +L+ + +L ++++VF R + + A A + + TA Sbjct: 536 VIGQSQAVASICRAIRRSRTGIKDPNRPMGSFLFLGPTGVGKTLLAQQIAIEMFGGEDSLIQVDMSEYMEKFAATKMMGSPPGYVGHEEGGHLTEQVRRRPYCVVLFDEIEKAHPDIMDLMLQILEQGRLTDSFGRKIDFRNTIIIMTSNLGADLIRKSGEIGFGLRSHMDYAVIKEKIDAAVKKHLKPEFINRLDESVIFKPLEKEALSEIIHLEINKLGSRLQNYQMDLNIPDSVISFLVTKGHSPEMGARPLRRVVEQYLEDPLAEMLLKESCRQEARKL---------RARLTEERVVFEREEEAVSALAIEGDGSEPITA 851
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_CAMJE (Chaperone protein clpB OS=Campylobacter jejuni GN=clpB PE=3 SV=1) HSP 1 Score: 287.73 bits (735), Expect = 9.174e-77 Identity = 139/273 (50.92%), Postives = 202/273 (73.99%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGE 879 V+GQD A+ ++A AI+R++AGL+ ++PI SF+F+GPTGVGKT+ AKALA ++F+ E+A++R DMSE+MEKH+VSRL+GAPPGY+G+EEGG+LTE VRR+PY+V+LFDE+EKAH DVFNV L ILDDGR TDS+G TV F NT+II+TSN+ S I+N+ KE + V + + F+PEF+NR+D+ I F PL +D+ IV+L +Q + ++ +K +++ A L+ G+DP++GARP++R I +E++L+ IL E Sbjct: 573 VIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKFLFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGHEEGGELTEAVRRKPYSVLLFDEVEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASNAIMNLSG----KEQ-----EDAVKNELKNFFKPEFLNRLDDIITFNPLGKDEAYEIVKLLFKDLQMSLENKGIKASLSENAALLIAKDGFDPDFGARPLRRAIYDLIEDKLSDMILADE 836
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPC_ODOSI (ATP-dependent Clp protease ATP-binding subunit clpA homolog OS=Odontella sinensis GN=clpC PE=3 SV=1) HSP 1 Score: 286.189 bits (731), Expect = 2.669e-76 Identity = 143/296 (48.31%), Postives = 203/296 (68.58%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYI----------------LNMDD----------ETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGIL 870 ++GQ A+ SV++AI+R+R GL +P RPIASF+F GPTGVGKTEL KAL+ YMF E++++R+DMSEYMEKH V++LIG+PPGYVGY EGGQLTE V+ +PY+V+L DE+EKAH DVFN+ LQILDDGR+TDS+GRT+ F NT+IIMT+N+G++ I +D+ E +E + + V + + FRPEF+NR+DE IVF L + I I L + ++QKR+ ++++ ++V + LL GYDP YGARP++R + + +E+ LA+ L Sbjct: 525 LIGQHHAIVSVSKAIRRARVGLRNPDRPIASFIFAGPTGVGKTELTKALSEYMFGNEDSMIRLDMSEYMEKHTVAKLIGSPPGYVGYNEGGQLTEAVQTKPYSVVLLDEVEKAHPDVFNLLLQILDDGRLTDSKGRTIDFRNTMIIMTTNLGAKIIEKESGIKPKTKQDKPAFRIDESGCLGWEPTPEPIKDSALFEKVTELVNEELKEFFRPEFLNRIDEIIVFNHLTKYDIWEICGLMVKQLQKRLEEKELTLEVDVSVRNLLTEEGYDPVYGARPLRRAVMRLLEDTLAQQCL 820
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: HSP78_YEAST (Heat shock protein 78, mitochondrial OS=Saccharomyces cerevisiae GN=HSP78 PE=1 SV=2) HSP 1 Score: 284.648 bits (727), Expect = 7.766e-76 Identity = 139/276 (50.36%), Postives = 197/276 (71.38%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYET-IKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEFK 885 VVGQD A+ ++++A++ RAGL+ RPIASFMF+GPTG GKTEL KALA ++F+ E ++R DMSE+ EKH VSRLIGAPPGYV E GGQLTE VRR+PYAV+LFDE EKAH DV + LQ+LD+G++TDS G V F NT+I+MTSN+G +LN D + +T K +V++A + + PEF+NR+D+ +VF L + + SIV +++ +Q R+A+++MK+ +TD A L GYD YGARP+ R+I + + N +A +L+G+ + Sbjct: 506 VVGQDEAIAAISDAVRLQRAGLTSEKRPIASFMFLGPTGTGKTELTKALAEFLFDDESNVIRFDMSEFQEKHTVSRLIGAPPGYVLSESGGQLTEAVRRKPYAVVLFDEFEKAHPDVSKLLLQVLDEGKLTDSLGHHVDFRNTIIVMTSNIGQDILLN--DTKLGDDGKIDTATKNKVIEAMKRSYPPEFINRIDDILVFNRLSKKVLRSIVDIRIAEIQDRLAEKRMKIDLTDEAKDWLTDKGYDQLYGARPLNRLIHRQILNSMATFLLKGQIR 779
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPC_CHLPN (Probable ATP-dependent Clp protease ATP-binding subunit OS=Chlamydia pneumoniae GN=clpC PE=3 SV=2) HSP 1 Score: 283.878 bits (725), Expect = 1.325e-75 Identity = 132/273 (48.35%), Postives = 202/273 (73.99%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETF--PKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILR 873 V+GQ+ AV S+ AI+RSR G+ DP+RP SF+F+GPTGVGK+ LA+ +A MF E+AL+++DMSEYMEK A ++++G+PPGYVG+EEGG LTE VRRRPY V+LFDEIEKAH D+ ++ LQIL+ GR+TDS GR V F + +IIMTSN+G+ I + F Y+ I++++ A + +PEF+NR+DE ++F+PL+++ +S I+ L+++++ R+ + +M + + D+ I L + G+ P GARP++RVI+QY+E+ LA+ +L+ Sbjct: 534 VIGQNDAVTSICRAIRRSRTGIKDPNRPTGSFLFLGPTGVGKSLLAQQIAIEMFGGEDALIQVDMSEYMEKFAATKMMGSPPGYVGHEEGGHLTEQVRRRPYCVVLFDEIEKAHPDIMDLMLQILEQGRLTDSFGRKVDFRHAIIIMTSNLGADLIRKSGEIGFGLKSHMDYKVIQEKIEHAMKKHLKPEFINRLDESVIFRPLEKESLSEIIHLEINKLDSRLKNYQMALNIPDSVISFLVTKGHSPEMGARPLRRVIEQYLEDPLAELLLK 806
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_MYCPE (Chaperone protein clpB OS=Mycoplasma penetrans GN=clpB PE=3 SV=1) HSP 1 Score: 283.878 bits (725), Expect = 1.325e-75 Identity = 131/273 (47.99%), Postives = 195/273 (71.43%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGE 879 V GQD A+K V++ + ++R G+++P+RPI SF+F+GPTGVGKTE+AK+LA +FNTE+A+VRI+MSEYMEKH++SRLIGAPPGY+GYE+ G+L+E +RR+PY+V+L DEIEKAH D+ NV LQ+LD+G + D+QGR ++F NT+IIMTSNVG+ Y++ ++ F +E + F+PEF+NR+DE I F + + I + LD ++KR+ D ++ + ++ + GY YGARP+ R IQ+ +EN + + IL+ E Sbjct: 424 VKGQDEALKLVSDTVLKNRVGINNPNRPIGSFLFVGPTGVGKTEVAKSLAENLFNTEKAIVRINMSEYMEKHSISRLIGAPPGYIGYEQAGELSEQIRRKPYSVVLLDEIEKAHPDILNVLLQVLDEGTLKDNQGRNINFKNTIIIMTSNVGALYLMENKEDMFERE-------------LKTSFKPEFLNRIDEIIKFNSITMEFAKEIAQKMLDDLEKRLKDNNYQITFDKSVVEYVAKNGYSKEYGARPINRFIQKTIENFITESILKNE 683
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPE_LACLM (ATP-dependent Clp protease ATP-binding subunit clpE OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=clpE PE=1 SV=2) HSP 1 Score: 282.722 bits (722), Expect = 2.951e-75 Identity = 144/266 (54.14%), Postives = 192/266 (72.18%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELA 858 V+GQD AV +++AI+RSR GL P+RPI SF+F+GPTGVGKTELAK LA +F + E+++R DMSEYMEKH+V++LIGAPPGYVGYEE GQLTE VRR PY++IL DEIEKAH DV ++FLQIL+DGR+TD+QGRTVSF +++IIMTSN G+ + + + A E + V+ F PEFMNR D I F L ++ + IV L LD V ++I + + VT AA + L LGY+P GARP++R+IQ+ +E+ +A Sbjct: 446 VIGQDEAVDKISKAIRRSRVGLGKPNRPIGSFLFVGPTGVGKTELAKQLAKELFGSSESMIRFDMSEYMEKHSVAKLIGAPPGYVGYEEAGQLTERVRRNPYSLILLDEIEKAHPDVMHMFLQILEDGRLTDAQGRTVSFKDSLIIMTSNAGTGKV----EASVGFGAAREGRTKSVLGQLGDFFSPEFMNRFDGIIEFSALSKENLLKIVDLMLDEVNEQIGRNDIHLSVTQAAKEKLVDLGYNPAMGARPLRRIIQENIEDSIA 707
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPE_LACLA (ATP-dependent Clp protease ATP-binding subunit clpE OS=Lactococcus lactis subsp. lactis GN=clpE PE=2 SV=1) HSP 1 Score: 282.722 bits (722), Expect = 2.951e-75 Identity = 145/266 (54.51%), Postives = 191/266 (71.80%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELA 858 V+GQD AV +A+AI+RSR GL P+RPI SF+F+GPTGVGKTELAK LA +F + E+++R DMSEYMEKH+V++LIGAPPGYVGYEE GQLTE VRR PY++IL DEIEKAH DV ++FLQIL+DGR+TD+QGRTVSF +++IIMTSN G+ + + + A E + V+ F PEFMNR D I F L ++ + IV L LD V ++I + + VT AA + L LGY+P GARP++R IQ+ +E+ +A Sbjct: 446 VIGQDEAVDKIAKAIRRSRVGLGKPNRPIGSFLFVGPTGVGKTELAKQLAKELFGSSESMIRFDMSEYMEKHSVAKLIGAPPGYVGYEEAGQLTERVRRNPYSLILLDEIEKAHPDVMHMFLQILEDGRLTDAQGRTVSFKDSLIIMTSNAGTGKV----EASVGFGAAREGRTKSVLGQLGDFFSPEFMNRFDGIIEFSALSKENLLKIVDLMLDEVNEQIGRNDIHLSVTQAAKEKLVDLGYNPAMGARPLRRTIQENIEDSIA 707
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPE_STRPN (ATP-dependent Clp protease ATP-binding subunit clpE OS=Streptococcus pneumoniae GN=clpE PE=2 SV=2) HSP 1 Score: 281.567 bits (719), Expect = 6.575e-75 Identity = 139/265 (52.45%), Postives = 186/265 (70.19%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENEL 855 V+GQD AV +A+AI+R+R GL P+RPI SF+F+GPTGVGKTEL+K LA +F + ++++R DMSEYMEKH+V++L+GAPPGYVGY+E GQLTE VR PY++IL DE+EKAH DV ++FLQ+LDDGR+TD QGRTVSF + +IIMTSN G+ + + A E V+ F PEFMNR D I F+ L +D + IV L L V KR++ +++ VTD + L LGYDP GARP++R IQ Y+E+ + Sbjct: 452 VIGQDDAVDKIAKAIRRNRVGLGTPNRPIGSFLFVGPTGVGKTELSKQLAIELFGSADSMIRFDMSEYMEKHSVAKLVGAPPGYVGYDEAGQLTEKVRHNPYSLILLDEVEKAHPDVMHMFLQVLDDGRLTDGQGRTVSFKDAIIIMTSNAGT----GKTEASVGFGAAREGRTNSVLGELGNFFSPEFMNRFDGIIEFKALSKDNLLQIVELMLADVNKRLSSNNIRLDVTDKVKEKLVDLGYDPKMGARPLRRTIQDYIEDTI 712
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_CHLPN (Chaperone protein clpB OS=Chlamydia pneumoniae GN=clpB PE=3 SV=1) HSP 1 Score: 280.026 bits (715), Expect = 1.913e-74 Identity = 145/308 (47.08%), Postives = 204/308 (66.23%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEFKXXXXXXXXXXXXAFSNGQLPQQKLVFRRLDTSS 984 VVGQ AV +V+++I+ +R GL+DP RP+ F+F+GPTGVGKTELAKALA +FN EEA+VR DMSEYMEKH++S+LIG+ PGYVGYEEGG L+E +RRRPY+V+LFDEIEKA +V N+ LQ+ DDG +TD + R V+ N + IMTSN+GS + + + E E I V + PEFMNR+DE + F PL ++ I IV +Q+ R+ +R+ R++ + D+ I L GYD +GARP+KR+IQQ V L+K +L+G+ K + ++ LVF++++T S Sbjct: 570 VVGQPFAVSAVSDSIRAARVGLNDPQRPLGVFLFLGPTGVGKTELAKALADLLFNKEEAMVRFDMSEYMEKHSISKLIGSSPGYVGYEEGGSLSEALRRRPYSVVLFDEIEKADKEVLNILLQVFDDGILTDGKKRKVNCKNALFIMTSNIGSPELADYCSKK-GSELTKEAILSVVSPVLKRYLSPEFMNRIDEILPFVPLTKEDIVKIVGIQMRRIAQRLKARRINLSWDDSVILFLSEQGYDSAFGARPLKRLIQQKVVILLSKALLKGDIKPDTSIEL----------TMAKEVLVFKKVETPS 866 The following BLAST results are available for this feature:
BLAST of DC900342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900342 ID=DC900342; Name=DC900342; organism=Citrus sinensis; type=EST; length=1211bpback to top |