DC900342
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_RHOBA (Chaperone protein clpB OS=Rhodopirellula baltica GN=clpB PE=3 SV=2) HSP 1 Score: 346.665 bits (888), Expect = 1.664e-94 Identity = 169/274 (61.68%), Postives = 217/274 (79.20%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEF 882 VVGQD AV +V++A++RSR+GL DP+RPI SF+F+GPTGVGKTEL KALA MF+ E A+VRIDMSE+ME+H+VSRLIGAPPGYVGYEEGG+LTE VRRRPYAVIL DE+EKAH DVFNV LQ+LDDGR+TD QGRTV+FTNTV++MTSNVGSQ I + +E + ++Q V DA + F PEF+NR+D+ ++F PL + QI IV+LQL+ ++ R+A + ++TDAAI + +GYDP YGARP+KRVIQ+ V+N LA IL+ + Sbjct: 593 VVGQDEAVTAVSDAVRRSRSGLQDPNRPIGSFLFLGPTGVGKTELCKALAEVMFDDESAMVRIDMSEFMERHSVSRLIGAPPGYVGYEEGGKLTEAVRRRPYAVILLDEMEKAHPDVFNVLLQVLDDGRLTDGQGRTVNFTNTVVVMTSNVGSQVIQRVTEE----GGGEDEMRQAVEDALKARFLPEFLNRIDDTVIFHPLQQTQIRRIVQLQLEELRSRLAANGLSFEITDAAIDQIAEVGYDPAYGARPLKRVIQREVQNPLASAILKNSY 862
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_YERPE (Chaperone protein clpB OS=Yersinia pestis GN=clpB PE=3 SV=2) HSP 1 Score: 345.895 bits (886), Expect = 2.839e-94 Identity = 169/273 (61.90%), Postives = 218/273 (79.85%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGE 879 V+GQD AV++V+ AI+RSRAGLSDP+RPI SF+F+GPTGVGKTEL KALA+++F++++A+VRIDMSE+MEKH+VSRL+GAPPGYVGYEEGG LTE VRRRPY+VIL DE+EKAH DVFN+ LQ+LDDGR+TD QGRTV F NTV+IMTSN+GS I E F + Y +K VMD FRPEF+NR+DE +VF PL R ++SI +QL+R+ KR+ +R ++++T A++ LG G+DP YGARP+KR IQQ +EN LA+ IL G+ Sbjct: 570 VIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALATFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLI----QEHF-GQMNYSEMKTVVMDVVSHHFRPEFINRIDEVVVFHPLGRAHLASIANIQLERLYKRLEERGYEVKITQPALEFLGEAGFDPVYGARPLKRAIQQEIENPLAQQILSGK 837
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_SALTY (Chaperone protein clpB OS=Salmonella typhimurium GN=clpB PE=3 SV=1) HSP 1 Score: 345.895 bits (886), Expect = 2.839e-94 Identity = 170/273 (62.27%), Postives = 218/273 (79.85%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGE 879 V+GQ+ AV++V+ AI+RSRAGLSDP+RPI SF+F+GPTGVGKTEL KALA++MF++++A+VRIDMSE+MEKH+VSRL+GAPPGYVGYEEGG LTE VRRRPY+VIL DE+EKAH DVFN+ LQ+LDDGR+TD QGRTV F NTV+IMTSN+GS I E F E Y +K+ V+ FRPEF+NR+DE +VF PL I+SI ++QL R+ KR+ +R ++ ++D A++LL + GYDP YGARP+KR IQQ +EN LA+ IL GE Sbjct: 570 VIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLI----QERF-GELDYGRMKEMVLGVVSQNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEIHISDEALKLLSANGYDPVYGARPLKRAIQQQIENPLAQQILSGE 837
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_SALTI (Chaperone protein clpB OS=Salmonella typhi GN=clpB PE=3 SV=1) HSP 1 Score: 345.895 bits (886), Expect = 2.839e-94 Identity = 170/273 (62.27%), Postives = 218/273 (79.85%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGE 879 V+GQ+ AV++V+ AI+RSRAGLSDP+RPI SF+F+GPTGVGKTEL KALA++MF++++A+VRIDMSE+MEKH+VSRL+GAPPGYVGYEEGG LTE VRRRPY+VIL DE+EKAH DVFN+ LQ+LDDGR+TD QGRTV F NTV+IMTSN+GS I E F E Y +K+ V+ FRPEF+NR+DE +VF PL I+SI ++QL R+ KR+ +R ++ ++D A++LL + GYDP YGARP+KR IQQ +EN LA+ IL GE Sbjct: 570 VIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLI----QERF-GELDYGRMKEMVLGVVSQNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEIHISDEALKLLSANGYDPVYGARPLKRAIQQQIENPLAQQILSGE 837
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_PSESM (Chaperone protein clpB OS=Pseudomonas syringae pv. tomato GN=clpB PE=3 SV=1) HSP 1 Score: 345.125 bits (884), Expect = 4.842e-94 Identity = 169/275 (61.45%), Postives = 220/275 (80.00%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEFK 885 V+GQ+ AV +V+ A++RSRAGLSDP+RP SFMF+GPTGVGKTEL KALA ++F+TEEA+VRIDMSE+MEKH+V+RLIGAPPGYVGYEEGG LTE VRR+PY+VIL DE+EKAHSDVFN+ LQ+L+DGR+TDS GRTV F NTVI+MTSN+GS I + + E + VMDA FRPEF+NR+DE ++F+PL RDQI+ I +QL R++KR+A+R++ M ++ A+ L ++GYDP YGARP+KR IQ+++EN LA+ IL G F+ Sbjct: 570 VIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHSDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQELVGDR-------EAQRAAVMDAVSTHFRPEFVNRIDEVVIFEPLARDQIAGITDIQLGRLRKRLAERELTMVLSPEALDKLIAVGYDPVYGARPLKRAIQRWIENPLAQLILSGGFE 837
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_HAEIN (Chaperone protein clpB OS=Haemophilus influenzae GN=clpB PE=3 SV=1) HSP 1 Score: 345.125 bits (884), Expect = 4.842e-94 Identity = 168/272 (61.76%), Postives = 212/272 (77.94%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRG 876 V+GQ+ AV +VA AI+RSRAGLSDP+RPI SF+F+GPTGVGKTEL K LA ++F++E+A+VRIDMSE+MEKH+VSRL+GAPPGYVGYEEGG LTE VRRRPY+VIL DE+EKAH+DVFN+ LQ+LDDGR+TD QGRTV F NTV+IMTSN+GS I DE +Y +K VM FRPEF+NR+DE +VF PL ++ I +I +QL+R+ KR+ R ++ TDA + +G +GYDP YGARP+KR IQQ +EN LA+ IL G Sbjct: 570 VIGQEEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLAKFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNKDE------SYSEMKALVMSVVSQHFRPEFINRIDETVVFHPLGKENIRAIASIQLERLAKRMETRGYELVFTDALLDFIGEVGYDPIYGARPLKRAIQQEIENSLAQQILSG 835
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB2_THEEB (Chaperone protein clpB 2 OS=Thermosynechococcus elongatus (strain BP-1) GN=clpB2 PE=3 SV=1) HSP 1 Score: 345.125 bits (884), Expect = 4.842e-94 Identity = 168/274 (61.31%), Postives = 223/274 (81.39%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEF 882 V+GQ AV +VA AI+R+RAG+ DP RPI SF+FMGPTGVGKTELA+ALA +F+ E ALVRIDMSEYMEKHAVSR+IGAPPGYVG++ GGQLTE +RRRPYAV+LFDE+EKAH +VFNV LQ+LDDGR+TDSQGRTV F NTVIIMTSN+GS++IL++ + ++ YE ++QRV+ +A+ FRPEF+NR+D+ I+F L R +++ I ++QL RV+K +AD+K+ +++T AA+ L ++G+DP YGARP+KR IQ+ +EN LA +L F Sbjct: 584 VIGQSDAVAAVAAAIRRARAGMKDPARPIGSFLFMGPTGVGKTELARALAEALFDDENALVRIDMSEYMEKHAVSRMIGAPPGYVGFDSGGQLTEAIRRRPYAVVLFDEVEKAHPEVFNVLLQVLDDGRITDSQGRTVDFRNTVIIMTSNLGSEHILDLAAD----DSRYEEMRQRVLQSAQKYFRPEFLNRIDDVILFHGLGRTELAQIAQIQLRRVEKLLADQKIHLRLTPAALDHLVAVGFDPVYGARPLKRAIQRELENPLAVKLLEEVF 853
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_AQUAE (Chaperone protein clpB OS=Aquifex aeolicus GN=clpB PE=3 SV=1) HSP 1 Score: 344.739 bits (883), Expect = 6.324e-94 Identity = 171/279 (61.29%), Postives = 224/279 (80.29%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNM----DDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEFK 885 VV Q+ AVK+VAEAI+R+RAGL DP RPIASF+F+GPTGVGKTEL+KALA +F E+AL+R+DMSE+ E+H+V++LIGAPPGYVGYEEGG+LTE VRR+PY+VIL DEIEKAH V ++FLQ+LDDGR+TDS GRTV F NTVIIMTSN+GSQY+LN+ D+ET +E +E K++V++ +L RPEF+NR+DE IVF+PL ++S I+ L + V KR+A+R +K+++T+ A + L GYDP +GARP+KR IQ+YVE LA I+RGE K Sbjct: 691 VVDQEHAVKAVAEAIRRARAGLKDPKRPIASFLFLGPTGVGKTELSKALAELLFGDEDALIRLDMSEFKEEHSVAKLIGAPPGYVGYEEGGKLTEAVRRKPYSVILLDEIEKAHPRVLDLFLQVLDDGRLTDSHGRTVDFRNTVIIMTSNIGSQYLLNIPVDADEETLNRE--FEKAKEKVLEELKLYMRPEFINRIDEIIVFKPLTMRELSKIIDLLIANVNKRLAERNIKIELTEEAKKELVRRGYDPAFGARPLKRTIQKYVETPLADKIIRGEIK 967
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB1_SYNY3 (Chaperone protein clpB 1 OS=Synechocystis sp. (strain PCC 6803) GN=clpB1 PE=3 SV=1) HSP 1 Score: 344.739 bits (883), Expect = 6.324e-94 Identity = 163/274 (59.49%), Postives = 220/274 (80.29%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEF 882 V+GQ AV +V+ AI+R+RAG+ DP RPI SF+FMGPTGVGKTELA+ALA ++F++EEA+VRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQL+E VRRRPY+V+L DE+EKAH DVFN+ LQ+LDDGR+TDSQGR V F NT+I+MTSN+GS +IL++ + + Y+ ++++V+ + R FRPEF+NR+D+ I+F L RD++ IV LQ+ R++K + ++K+ + ++DAA+ + S GYDP YGARP+KR IQ+ +EN +A IL F Sbjct: 585 VIGQKEAVAAVSAAIRRARAGMKDPSRPIGSFLFMGPTGVGKTELARALAGFLFDSEEAMVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLSEAVRRRPYSVVLLDEVEKAHLDVFNILLQVLDDGRITDSQGRVVDFRNTIIVMTSNIGSDHILSLSAD----DADYDKMQKQVLQSLRKHFRPEFLNRIDDLIIFHTLKRDELRRIVVLQIKRIEKLLDEQKITLSLSDAALDHIVSAGYDPTYGARPLKRAIQRQLENPIATKILENTF 854
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_NEIMB (Chaperone protein clpB OS=Neisseria meningitidis serogroup B GN=clpB PE=3 SV=1) HSP 1 Score: 344.354 bits (882), Expect = 8.259e-94 Identity = 163/274 (59.49%), Postives = 218/274 (79.56%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEF 882 VVGQD AV++V++AI+RSR+GL+DP++P SF+F+GPTGVGKTEL KALA ++F++E+ L+RIDMSEYMEKHAV+RLIGAPPGYVGYEEGG LTE VRR+PY+VIL DE+EKAH DVFN+ LQ+LDDGR+TD QGRTV F NTVI+MTSN+GSQ+I M + YE +K+ VM+ + FRPE +NR+DE +VF LD+D I +I ++QL ++KR+ + +++ V+DAA+ ++ G+DP YGARP+KR IQ +EN LAK +L G + Sbjct: 574 VVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQD------YEAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQDNIRNIAKIQLKGLEKRLEKQNLRLAVSDAALDIIAKAGFDPIYGARPLKRAIQSEIENPLAKALLAGNY 841 The following BLAST results are available for this feature:
BLAST of DC900342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900342 ID=DC900342; Name=DC900342; organism=Citrus sinensis; type=EST; length=1211bpback to top |