DC900342
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_STRCO (Chaperone protein clpB OS=Streptomyces coelicolor GN=clpB PE=3 SV=1) HSP 1 Score: 328.176 bits (840), Expect = 6.125e-89 Identity = 152/275 (55.27%), Postives = 216/275 (78.55%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEFK 885 ++GQ AV++V++A++RSRAG++DP RP SF+F+GPTGVGKTELAKALA ++F+ E A+VRIDMSEY EKH+V+RL+GAPPGYVGYEEGGQLTE VRRRPY V+L DE+EKAH +VF++ LQ+LDDGR+TD QGRTV F NT++++TSN+GSQY+++ T KQ+V++ R F+PEF+NR+D+ +VF L ++++S I RLQ++ + +R+A+R++ ++VTD A+ L G DP YGARP++R++Q + + LA+ IL GE K Sbjct: 574 LIGQTQAVRAVSDAVRRSRAGIADPDRPTGSFLFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYSEKHSVARLVGAPPGYVGYEEGGQLTEAVRRRPYTVVLLDEVEKAHPEVFDILLQVLDDGRLTDGQGRTVDFRNTILVLTSNLGSQYLVD-------PTTGEAEKKQQVLEVVRSSFKPEFLNRLDDLVVFSALSQEELSRIARLQINGLARRLAERRLTLEVTDEALAWLAEEGNDPAYGARPLRRLVQTAIGDRLAREILSGEIK 841
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_RICFE (Chaperone protein clpB OS=Rickettsia felis GN=clpB PE=3 SV=2) HSP 1 Score: 327.791 bits (839), Expect = 8.000e-89 Identity = 152/273 (55.68%), Postives = 218/273 (79.85%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGE 879 V+GQD A+K V++A++RSRAG+ D +RP+ SF+F+GPTGVGKTEL KALAS++F+ A++RIDMSEYMEKHA+SRLIGAPPGY+GY++GG LTE VRRRPY VILFDE+EKAH D+FN+ LQILD+GR+TDSQG TV F NT+I++TSN+G++ ++N ++ E Y+ +K VM+ + +F+PEF+NR+DE I+F L+R+ I IV++QL+ ++K + + + ++ ++A+ L GYDP++GARP+KR+IQ+ ++N LAK IL GE Sbjct: 569 VIGQDEAIKGVSDAVRRSRAGIQDINRPLGSFLFLGPTGVGKTELTKALASFLFDDRNAILRIDMSEYMEKHAISRLIGAPPGYIGYDQGGVLTEAVRRRPYQVILFDEVEKAHPDIFNIMLQILDEGRLTDSQGITVDFKNTIIVLTSNLGAEILVNQKED----EDTYK-VKDEVMEYVKAVFKPEFLNRLDEIILFHRLNRNNIHDIVKIQLESLKKILLAQNILLEFDESALNYLAEKGYDPSFGARPLKRLIQREIQNNLAKMILAGE 836
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_BACCR (Chaperone protein clpB OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=clpB PE=3 SV=1) HSP 1 Score: 327.791 bits (839), Expect = 8.000e-89 Identity = 162/273 (59.34%), Postives = 216/273 (79.12%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILN-MDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRG 876 V+GQ+ AV V++A+ R+RAG+ DP+RPI SF+F+GPTGVGKTELAK LA +F++EE ++RIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTE VRR+PY+V+L DEIEKAH +VFN+ LQ+LDDGR+TDSQGRTV F NTVIIMTSN+GS ++L+ ++++ KE + + VM R FRPEF+NRVDE I+F+PL ++I IV + +Q R+ADR + +++TDAA + + G+DP YGARP+KR +Q+ VE +LA+ ++ G Sbjct: 576 VIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPYSVVLLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGSAHLLDGLEEDGSIKEES----RDLVMGQLRGHFRPEFLNRVDEIILFKPLTTNEIKGIVDKIVKELQGRLADRHITVELTDAAKEFVVEAGFDPMYGARPLKRYVQRQVETKLARELIAG 844
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_HAEDU (Chaperone protein clpB OS=Haemophilus ducreyi GN=clpB PE=3 SV=1) HSP 1 Score: 327.405 bits (838), Expect = 1.045e-88 Identity = 158/273 (57.88%), Postives = 210/273 (76.92%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGE 879 V+GQ+ AV++VA AI RSRAGL+DP++PI SF+F+GPTGVGKTEL+K LA+++F+ E A+VRIDMSE+MEKH+VSRL+GAPPGYVGYE+GG LTE VRRRPY+V+L DE+EKAH DVFN+ LQ+LDDGR+TD QGRTV F NTV+IMTSN+G+ I E Y +K+ VM FRPEF+NR+DE +VF PLD+ I +I +QL R+ +R+A+R ++ ++D A+ + G+D +GARP+KR IQQ +EN LA+ IL G+ Sbjct: 570 VIGQNEAVEAVANAILRSRAGLADPNKPIGSFLFLGPTGVGKTELSKTLANFLFDDENAIVRIDMSEFMEKHSVSRLVGAPPGYVGYEQGGYLTEAVRRRPYSVVLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGAHLIQE------NAEITYLAMKEMVMSVVSQHFRPEFINRIDETVVFHPLDQQHIRAIANIQLQRLIRRLAERGYQVTISDTALDHISQAGFDSLFGARPLKRAIQQELENPLAQQILSGK 836
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_BACAN (Chaperone protein clpB OS=Bacillus anthracis GN=clpB PE=3 SV=1) HSP 1 Score: 327.02 bits (837), Expect = 1.365e-88 Identity = 162/273 (59.34%), Postives = 217/273 (79.49%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILN-MDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRG 876 V+GQ+ AV V++A+ R+RAG+ DP+RPI SF+F+GPTGVGKTELAK LA +F++EE ++RIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTE VRR+PY+VIL DEIEKAH +VFN+ LQ+LDDGR+TDSQGRTV F NTVIIMTSN+GS ++L+ ++++ KE + ++ VM R FRPEF+NRVDE I+F+PL ++I IV + +Q R+ADR + +++T+AA + + G+DP YGARP+KR +Q+ VE +LA+ ++ G Sbjct: 576 VIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGSAHLLDGLEEDGSIKEES----RELVMGQLRGHFRPEFLNRVDEIILFKPLTTNEIKGIVDKIVKELQGRLADRHITVKLTEAAKEFVVEAGFDPMYGARPLKRYVQRQVETKLARELIAG 844
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_CLOTE (Chaperone protein clpB OS=Clostridium tetani GN=clpB PE=3 SV=1) HSP 1 Score: 326.25 bits (835), Expect = 2.328e-88 Identity = 156/273 (57.14%), Postives = 215/273 (78.75%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGE 879 V+GQD AV++V+ A+ R+RAG+ DP +PI SF+F+GPTGVGKTELAK L +F++EE ++RIDMSEYMEK++VSRLIGAPPGYVGYEEGGQLTE VRR+PY+VILFDEIEKAH DVFN+FLQILDDGR+TD++G+TV F N +IIMTSN+GS Y+L E ++ ET+K +V +A + F+PEF+NR+D+ I+F+PL +I+ I+ + L ++ R+ DR + + VT+ A +L+ GYD YGARP+KR I+ +E ++AK I++G+ Sbjct: 576 VIGQDEAVEAVSNAVLRARAGMKDPQKPIGSFIFLGPTGVGKTELAKTLCKNLFDSEENIIRIDMSEYMEKYSVSRLIGAPPGYVGYEEGGQLTEAVRRKPYSVILFDEIEKAHDDVFNIFLQILDDGRLTDNKGKTVDFKNCIIIMTSNIGSSYLL----ENKKEDGIDETVKNKVSNALKDRFKPEFLNRLDDIIMFKPLTNREITKIIDIFLQDIENRLKDRNITLIVTENAKELMAKEGYDAIYGARPLKRYIENILETKIAKQIIKGD 844
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_RICCN (Chaperone protein clpB OS=Rickettsia conorii GN=clpB PE=3 SV=1) HSP 1 Score: 325.865 bits (834), Expect = 3.040e-88 Identity = 151/273 (55.31%), Postives = 217/273 (79.49%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGE 879 V+GQD A+K V++A++RSRAG+ D +RP+ SF+F+GPTGVGKTEL KALA ++F+ A++RIDMSEYMEKHA+SRLIGAPPGY+GY++GG LTE VRRRPY VILFDE+EKAH D+FN+ LQILD+GR+TDSQG TV F NT+I++TSN+G++ ++N ++ E Y+ +K VM+ + +F+PEF+NR+DE I+F L+R+ I IV++QL+ ++K + + + ++ ++A+ L GYDP++GARP+KR+IQ+ ++N LAK IL GE Sbjct: 569 VIGQDKAIKGVSDAVRRSRAGIQDINRPLGSFLFLGPTGVGKTELTKALAGFLFDDRNAILRIDMSEYMEKHAISRLIGAPPGYIGYDQGGVLTEAVRRRPYQVILFDEVEKAHPDIFNIMLQILDEGRLTDSQGITVDFKNTIIVLTSNLGAEILVNQKED----EDTYK-VKDEVMEYVKAVFKPEFLNRLDEIILFHRLNRNNIHDIVKIQLESLKKILLAQNIILEFDESALNYLAEKGYDPSFGARPLKRLIQREIQNNLAKMILAGE 836
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_RICBR (Chaperone protein clpB OS=Rickettsia bellii (strain RML369-C) GN=clpB PE=3 SV=1) HSP 1 Score: 325.479 bits (833), Expect = 3.970e-88 Identity = 152/273 (55.68%), Postives = 218/273 (79.85%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGE 879 V+GQD A+KSV++A++RSRAG+ D +RP+ SF+F+GPTGVGKTEL KALA ++F+ A++RIDMSEYMEKHA+SRLIGAPPGYVGY++GG LTE VRRRPY VILFDE+EKAH D+FN+ LQILD+GR+TDSQG TV F NT+I++TSN+G++ ++N + E Y+ +K +VM+ +++F+PEF+NR+DE I+F L++ I IV++QL+ ++K ++ + + ++ + A+ L GYDP++GARP+KR+IQ+ ++N LAK IL GE Sbjct: 569 VIGQDEAIKSVSDAVRRSRAGIQDINRPLGSFLFLGPTGVGKTELTKALAGFLFDDRNAILRIDMSEYMEKHAISRLIGAPPGYVGYDQGGVLTEAVRRRPYQVILFDEVEKAHPDIFNIMLQILDEGRLTDSQGITVDFKNTIIVLTSNLGAEILVNQKE----GEDTYK-VKDQVMEYVKMVFKPEFLNRLDEIILFHRLNQSNIHDIVKIQLEGLKKILSAQNIILEFDEPALNYLAEKGYDPSFGARPLKRLIQREIQNNLAKMILAGE 836
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_COREF (Chaperone protein clpB OS=Corynebacterium efficiens GN=clpB PE=3 SV=1) HSP 1 Score: 325.479 bits (833), Expect = 3.970e-88 Identity = 150/275 (54.55%), Postives = 217/275 (78.91%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEFK 885 VVGQ AV +V++A++RSRAG++DP+RP SF+F+GPTGVGKTELAKA++ ++F+ E A+VRIDMSEY EKH+V+RL+GAPPGYVGY++GGQLTE VRRRPY +LFDE+EKAH DVF++ LQ+LDDGR+TD QGRTV F NT++I+TSN+G+ ++++MDA ++ F+PEF+NR+D+ +VF PL ++Q++SIV +Q+ ++ +R++DR++ ++V+DAA L GYDP YGARP++R+IQQ + ++LAK +L GE + Sbjct: 573 VVGQHEAVTAVSDAVRRSRAGVADPNRPTGSFLFLGPTGVGKTELAKAVSEFLFDDERAMVRIDMSEYSEKHSVARLVGAPPGYVGYDQGGQLTEAVRRRPYTTVLFDEVEKAHPDVFDILLQVLDDGRLTDGQGRTVDFRNTILILTSNLGA-----------------GGTREQMMDAVKMAFKPEFINRLDDIVVFDPLSQEQLASIVEIQISQLAERLSDRRLTLRVSDAAKLWLAERGYDPAYGARPLRRLIQQAIGDQLAKELLAGEIR 830
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_PROMA (Chaperone protein clpB OS=Prochlorococcus marinus GN=clpB PE=3 SV=1) HSP 1 Score: 323.553 bits (828), Expect = 1.509e-87 Identity = 151/273 (55.31%), Postives = 218/273 (79.85%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGE 879 V+GQ AV++VA++IQRSR GLSDP RP+ SF+ +GPTGVGKTEL+K+LA +F++E+A++RIDMSEYMEKH++SRLIGAPPGYVGYE GGQL+E VRR PY+VILFDE+EKA+SDV N+ LQILD+GR+TD +G+ ++F NT+II+TSNVGS+ I+ M + K+ YE I++ V + + F+PEF+NR+DE I+F+ L ++ + IV+LQ+D+V+ R+ D+ +++++ + I + GY+P YGARP+KR+IQ +E +LAK IL+ + Sbjct: 577 VIGQKQAVQAVADSIQRSRTGLSDPSRPMGSFLLLGPTGVGKTELSKSLAKELFDSEKAMIRIDMSEYMEKHSISRLIGAPPGYVGYESGGQLSEAVRRNPYSVILFDEVEKANSDVLNIMLQILDEGRLTDGKGKNINFKNTIIILTSNVGSESIIEMTN----KKNEYELIEEVVRNQLKNYFKPEFLNRLDEQIIFKSLKKEDLKKIVKLQIDKVKARLKDKGLEIELNEKVIDWIADKGYNPIYGARPIKRIIQTKLETKLAKMILKSK 845 The following BLAST results are available for this feature:
BLAST of DC900342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900342 ID=DC900342; Name=DC900342; organism=Citrus sinensis; type=EST; length=1211bpback to top |