DC900315
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900315 vs. ExPASy Swiss-Prot
Match: PUB3_SCHPO (E3 ubiquitin-protein ligase pub3 OS=Schizosaccharomyces pombe GN=pub3 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 4.301e-19 Identity = 57/135 (42.22%), Postives = 81/135 (60.00%), Query Frame = 2 Query: 167 VPRF-VDFDNKRAHFRSKIKHQHDHHHSPL----RISVRRAYILEDSYNQLRMRSTQDLKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFT-TVGNESTFQPNPNSVYQTEHLSYFKFVGRVVGKAL 553 VP++ DF K +FRS+ + PL + VRR +I EDSY ++ S DLK RL + F GE+G+D GGL+RE++ LLS +FD LF + + T Q NP+S EHL+YF+F+GRV+G A+ Sbjct: 405 VPQYKCDFRRKLIYFRSQPGMR------PLPGQCNVKVRRDHIFEDSYAEIMRYSAHDLKKRLMIRFDGEDGLDYGGLSREFFFLLSHKMFDPIYCLFEYSAVDNYTLQINPHSSINPEHLNYFRFIGRVIGLAI 533
BLAST of DC900315 vs. ExPASy Swiss-Prot
Match: NEDD4_RAT (E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus GN=Nedd4 PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 5.617e-19 Identity = 53/128 (41.41%), Postives = 78/128 (60.94%), Query Frame = 2 Query: 182 DFDNKRAHFRSKIKHQHDHHHSPLRISVRRAYILEDSYNQLR-MRSTQDLKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDK--GALLFTTVGNESTFQPNPNS-VYQTEHLSYFKFVGRVVGKAL 553 D+ K FR K+K Q D + + +RRA ILEDSY ++ ++ LK RL + F GE+G+D GG+ REW+ L+S+ +F+ G ++ + T Q NPNS + +HLSYFKF+GRV G A+ Sbjct: 507 DYKRKYEFFRRKLKKQTDIPNK-FEMKLRRANILEDSYRRIMGVKRADFLKARLWIEFDGEKGLDYGGVAREWFFLISKEMFNPYYGLFEYSATEDNYTLQINPNSGLCNEDHLSYFKFIGRVAGMAV 633
BLAST of DC900315 vs. ExPASy Swiss-Prot
Match: NEDD4_MOUSE (E3 ubiquitin-protein ligase NEDD4 OS=Mus musculus GN=Nedd4 PE=1 SV=3) HSP 1 Score: 93.9745 bits (232), Expect = 5.617e-19 Identity = 57/132 (43.18%), Postives = 79/132 (59.85%), Query Frame = 2 Query: 167 VPRFVDFDNKRAHFRSKIKHQHDHHHSPLRISVRRAYILEDSYNQLRMRSTQDL-KGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNES-TFQPNPNS-VYQTEHLSYFKFVGRVVGKAL 553 VP D+ K FR K+K Q D + + +RRA ILEDSY ++ DL K RL + F GE+G+D GG+ REW+ L+S+ +F+ LF ++ T Q NPNS + +HLSYFKF+GRV G A+ Sbjct: 503 VPYSRDYKRKYEFFRRKLKKQTDIPNK-FEMKLRRANILEDSYRRIMGVKRADLLKARLWIEFDGEKGLDYGGVAREWFFLISKEMFNPYYGLFEYSATDNYTLQINPNSGLCNEDHLSYFKFIGRVAGMAV 633
BLAST of DC900315 vs. ExPASy Swiss-Prot
Match: RSP5_YEAST (E3 ubiquitin-protein ligase RSP5 OS=Saccharomyces cerevisiae GN=RSP5 PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 7.336e-19 Identity = 58/135 (42.96%), Postives = 82/135 (60.74%), Query Frame = 2 Query: 152 SLMLKVPRFV-DFDNKRAHFRSK--IKHQHDHHHSPLRISVRRAYILEDSYNQLRMRSTQDLKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFT-TVGNESTFQPNPNSVYQTEHLSYFKFVGRVVG 544 SL VP++ DF K +FRS+ ++ H I VRR I ED+Y ++ ++ +DLK RL + F GEEG+D GG++RE++ LLS +F+ LF + + T Q NPNS EHL+YFKF+GRVVG Sbjct: 423 SLDQNVPQYKRDFRRKVIYFRSQPALRILPGQCH----IKVRRKNIFEDAYQEIMRQTPEDLKKRLMIKFDGEEGLDYGGVSREFFFLLSHEMFNPFYCLFEYSAYDNYTIQINPNSGINPEHLNYFKFIGRVVG 553
BLAST of DC900315 vs. ExPASy Swiss-Prot
Match: HACE1_HUMAN (E3 ubiquitin-protein ligase HACE1 OS=Homo sapiens GN=HACE1 PE=1 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 1.807e-17 Identity = 57/179 (31.84%), Postives = 90/179 (50.28%), Query Frame = 2 Query: 71 FVRFSEKHRKLLNAFIRQNPGLLEKSFSLMLKVP----RFVDFDNKRAHFRSKIKHQHDHHHS----------PLR----ISVRRAYILEDSYNQLRMRSTQDLKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNESTFQPNPNSVYQTEHLSYFKFVGRVVGKAL 553 F+ F KH ++L F+ +NP ++ F +L+ P RF+ K F+ + + ++H HS P+ + V R I S + + LK + V F GEEG+ G + REW+ +LS I + LFT + +TFQPN NS +HL+YF+F G+++G AL Sbjct: 476 FIEFVCKHDEVLKCFVNRNPKIIFDHFHFLLECPELMSRFMHII-KAQPFKDRCEWFYEHLHSGQPDSDMVHRPVNENDILLVHRDSIFRSSCEVVSKANCAKLKQGIAVRFHGEEGMGQG-VVREWFDILSNEIVNPDYALFTQSADGTTFQPNSNSYVNPDHLNYFRFAGQILGLAL 652
BLAST of DC900315 vs. ExPASy Swiss-Prot
Match: HACE1_MOUSE (E3 ubiquitin-protein ligase HACE1 OS=Mus musculus GN=Hace1 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.082e-17 Identity = 57/179 (31.84%), Postives = 90/179 (50.28%), Query Frame = 2 Query: 71 FVRFSEKHRKLLNAFIRQNPGLLEKSFSLMLKVP----RFVDFDNKRAHFRSKIKHQHDHHHS----------PLR----ISVRRAYILEDSYNQLRMRSTQDLKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNESTFQPNPNSVYQTEHLSYFKFVGRVVGKAL 553 F+ F KH ++L F+ +NP ++ F +L+ P RF+ K F+ + + ++H HS P+ + V R I S + + LK + V F GEEG+ G + REW+ +LS I + LFT + +TFQPN NS +HL+YF+F G+++G AL Sbjct: 476 FIEFVCKHDEVLKCFVNRNPKIIFDHFHFLLECPELMSRFMHII-KAQPFKDRCEWFYEHLHSGQPDSDMVHRPVSENDILLVHRDSIFRSSCEIVSKANCAKLKQGIAVRFHGEEGMGQG-VVREWFDILSNEIVNPDYALFTQSADGTTFQPNSNSYVNPDHLNYFRFAGQILGLAL 652
BLAST of DC900315 vs. ExPASy Swiss-Prot
Match: WWP1_MOUSE (NEDD4-like E3 ubiquitin-protein ligase WWP1 OS=Mus musculus GN=Wwp1 PE=1 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 5.258e-17 Identity = 52/121 (42.98%), Postives = 68/121 (56.20%), Query Frame = 2 Query: 194 KRAHFRSKIKHQHDHHHSPLRISVRRAYILEDSYNQLRMRSTQDLKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVG-NESTFQPNPNSVYQTEHLSYFKFVGRVVGKAL 553 K AHFR Q + S ++I+V R + EDS+ Q+ DL+ RL V F+GEEG+D GGL REW+ LLS + + LF G N Q NP S +HLSYF F+GR + AL Sbjct: 546 KLAHFRYLC--QSNALPSHVKINVSRQTLFEDSFQQIMALKPYDLRRRLYVIFRGEEGLDYGGLAREWFFLLSHEVLNPMYCLFEYAGKNNYCLQINPASTINPDHLSYFCFIGRFIAMAL 664
BLAST of DC900315 vs. ExPASy Swiss-Prot
Match: WWP1_HUMAN (NEDD4-like E3 ubiquitin-protein ligase WWP1 OS=Homo sapiens GN=WWP1 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 5.258e-17 Identity = 52/121 (42.98%), Postives = 68/121 (56.20%), Query Frame = 2 Query: 194 KRAHFRSKIKHQHDHHHSPLRISVRRAYILEDSYNQLRMRSTQDLKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVG-NESTFQPNPNSVYQTEHLSYFKFVGRVVGKAL 553 K AHFR Q + S ++I+V R + EDS+ Q+ DL+ RL V F+GEEG+D GGL REW+ LLS + + LF G N Q NP S +HLSYF F+GR + AL Sbjct: 550 KLAHFRYLC--QSNALPSHVKINVSRQTLFEDSFQQIMALKPYDLRRRLYVIFRGEEGLDYGGLAREWFFLLSHEVLNPMYCLFEYAGKNNYCLQINPASTINPDHLSYFCFIGRFIAMAL 668
BLAST of DC900315 vs. ExPASy Swiss-Prot
Match: ITCH_MOUSE (E3 ubiquitin-protein ligase Itchy OS=Mus musculus GN=Itch PE=1 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 5.258e-17 Identity = 50/125 (40.00%), Postives = 70/125 (56.00%), Query Frame = 2 Query: 182 DFDNKRAHFRSKIKHQHDHHHSPLRISVRRAYILEDSYNQLRMRSTQDLKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNES-TFQPNPNSVYQTEHLSYFKFVGRVVGKAL 553 DF K +FR + H ++I+V R + EDS+ Q+ S QDL+ RL V F GEEG+D GG+ REW+ LLS + + LF G ++ Q NP S +HL YF+F+GR + AL Sbjct: 488 DFKAKVQYFRFWCQQLAMPQH--IKITVTRKTLFEDSFQQIMSFSPQDLRRRLWVIFPGEEGLDYGGVAREWFFLLSHEVLNPMYCLFEYAGKDNYCLQINPASYINPDHLKYFRFIGRFIAMAL 610
BLAST of DC900315 vs. ExPASy Swiss-Prot
Match: ITCH_HUMAN (E3 ubiquitin-protein ligase Itchy homolog OS=Homo sapiens GN=ITCH PE=1 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 5.258e-17 Identity = 50/125 (40.00%), Postives = 70/125 (56.00%), Query Frame = 2 Query: 182 DFDNKRAHFRSKIKHQHDHHHSPLRISVRRAYILEDSYNQLRMRSTQDLKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNES-TFQPNPNSVYQTEHLSYFKFVGRVVGKAL 553 DF K +FR + H ++I+V R + EDS+ Q+ S QDL+ RL V F GEEG+D GG+ REW+ LLS + + LF G ++ Q NP S +HL YF+F+GR + AL Sbjct: 527 DFKAKVQYFRFWCQQLAMPQH--IKITVTRKTLFEDSFQQIMSFSPQDLRRRLWVIFPGEEGLDYGGVAREWFFLLSHEVLNPMYCLFEYAGKDNYCLQINPASYINPDHLKYFRFIGRFIAMAL 649 The following BLAST results are available for this feature:
BLAST of DC900315 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900315 ID=DC900315; Name=DC900315; organism=Citrus sinensis; type=EST; length=569bpback to top |