DC900315
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900315 vs. ExPASy Swiss-Prot
Match: SMUF1_HUMAN (E3 ubiquitin-protein ligase SMURF1 OS=Homo sapiens GN=SMURF1 PE=1 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 9.916e-16 Identity = 46/101 (45.54%), Postives = 60/101 (59.41%), Query Frame = 2 Query: 254 RISVRRAYILEDSYNQLRMRSTQDLKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFT-TVGNESTFQPNPNSVYQTEHLSYFKFVGRVVGKAL 553 RI V R I E+SY Q+ +DLK RL V F+GEEG+D GG+ REW LL + + LF + N Q NP+S +HLSYF FVGR++G A+ Sbjct: 400 RIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVAREWLYLLCHEMLNPYYGLFQYSTDNIYMLQINPDSSINPDHLSYFHFVGRIMGLAV 500
BLAST of DC900315 vs. ExPASy Swiss-Prot
Match: WWP2_MOUSE (NEDD4-like E3 ubiquitin-protein ligase WWP2 OS=Mus musculus GN=Wwp2 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.295e-15 Identity = 43/104 (41.35%), Postives = 61/104 (58.65%), Query Frame = 2 Query: 245 SPLRISVRRAYILEDSYNQLRMRSTQDLKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVG-NESTFQPNPNSVYQTEHLSYFKFVGRVVGKAL 553 S ++ISV R + EDS+ Q+ DL+ RL + +GEEG+D GG+ REW+ LLS + + LF G N Q NP S +HL+YF+F+GR + AL Sbjct: 513 SHVKISVSRQTLFEDSFQQIMNMKPYDLRRRLYIIMRGEEGLDYGGIAREWFFLLSHEVLNPMYCLFEYAGKNNYCLQINPASSINPDHLTYFRFIGRFIAMAL 616
BLAST of DC900315 vs. ExPASy Swiss-Prot
Match: WWP2_HUMAN (NEDD4-like E3 ubiquitin-protein ligase WWP2 OS=Homo sapiens GN=WWP2 PE=1 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 1.295e-15 Identity = 43/104 (41.35%), Postives = 61/104 (58.65%), Query Frame = 2 Query: 245 SPLRISVRRAYILEDSYNQLRMRSTQDLKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVG-NESTFQPNPNSVYQTEHLSYFKFVGRVVGKAL 553 S ++ISV R + EDS+ Q+ DL+ RL + +GEEG+D GG+ REW+ LLS + + LF G N Q NP S +HL+YF+F+GR + AL Sbjct: 513 SHVKISVSRQTLFEDSFQQIMNMKPYDLRRRLYIIMRGEEGLDYGGIAREWFFLLSHEVLNPMYCLFEYAGKNNYCLQINPASSINPDHLTYFRFIGRFIAMAL 616
BLAST of DC900315 vs. ExPASy Swiss-Prot
Match: NED4L_PONAB (E3 ubiquitin-protein ligase NEDD4-like OS=Pongo abelii GN=NEDD4L PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.209e-15 Identity = 51/132 (38.64%), Postives = 75/132 (56.82%), Query Frame = 2 Query: 167 VPRFVDFDNKRAHFRSKIKHQHDHHHSPLRISVRRAYILEDSYNQLRMRSTQD-LKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNES-TFQPNPNS-VYQTEHLSYFKFVGRVVGKAL 553 VP +F K +FR K+K D + + + R I E+SY ++ D LK RL + F+ E+G+D GG+ REW+ LLS+ +F+ LF ++ T Q NPNS + +HLSYF F+GRV G A+ Sbjct: 575 VPYSREFKQKYDYFRKKLKKPADIPNR-FEMKLHRNNIFEESYRRIMSVKRPDVLKARLWIEFESEKGLDYGGVAREWFFLLSKEMFNPYYGLFEYSATDNYTLQINPNSGLCNEDHLSYFTFIGRVAGLAV 705
BLAST of DC900315 vs. ExPASy Swiss-Prot
Match: NED4L_MOUSE (E3 ubiquitin-protein ligase NEDD4-like OS=Mus musculus GN=Nedd4l PE=1 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 2.209e-15 Identity = 51/132 (38.64%), Postives = 75/132 (56.82%), Query Frame = 2 Query: 167 VPRFVDFDNKRAHFRSKIKHQHDHHHSPLRISVRRAYILEDSYNQLRMRSTQD-LKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNES-TFQPNPNS-VYQTEHLSYFKFVGRVVGKAL 553 VP +F K +FR K+K D + + + R I E+SY ++ D LK RL + F+ E+G+D GG+ REW+ LLS+ +F+ LF ++ T Q NPNS + +HLSYF F+GRV G A+ Sbjct: 620 VPYSREFKQKYDYFRKKLKKPADIPNR-FEMKLHRNNIFEESYRRIMSVKRPDVLKARLWIEFESEKGLDYGGVAREWFFLLSKEMFNPYYGLFEYSATDNYTLQINPNSGLCNEDHLSYFTFIGRVAGLAV 750
BLAST of DC900315 vs. ExPASy Swiss-Prot
Match: NED4L_HUMAN (E3 ubiquitin-protein ligase NEDD4-like OS=Homo sapiens GN=NEDD4L PE=1 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 2.209e-15 Identity = 51/132 (38.64%), Postives = 75/132 (56.82%), Query Frame = 2 Query: 167 VPRFVDFDNKRAHFRSKIKHQHDHHHSPLRISVRRAYILEDSYNQLRMRSTQD-LKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNES-TFQPNPNS-VYQTEHLSYFKFVGRVVGKAL 553 VP +F K +FR K+K D + + + R I E+SY ++ D LK RL + F+ E+G+D GG+ REW+ LLS+ +F+ LF ++ T Q NPNS + +HLSYF F+GRV G A+ Sbjct: 591 VPYSREFKQKYDYFRKKLKKPADIPNR-FEMKLHRNNIFEESYRRIMSVKRPDVLKARLWIEFESEKGLDYGGVAREWFFLLSKEMFNPYYGLFEYSATDNYTLQINPNSGLCNEDHLSYFTFIGRVAGLAV 721
BLAST of DC900315 vs. ExPASy Swiss-Prot
Match: SMUF1_DROME (E3 ubiquitin-protein ligase Smurf1 OS=Drosophila melanogaster GN=lack PE=1 SV=3) HSP 1 Score: 80.8777 bits (198), Expect = 4.921e-15 Identity = 44/101 (43.56%), Postives = 61/101 (60.40%), Query Frame = 2 Query: 254 RISVRRAYILEDSYNQLRMRSTQDLKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFT-TVGNESTFQPNPNSVYQTEHLSYFKFVGRVVGKAL 553 R+ V R I E+SY + +D++ RL V F+GEEG+D GG+ REW LLSR + + LF + + T Q NP+S +HLSYF FVGR +G A+ Sbjct: 703 RLEVSRNEIFEESYRLIMKMRAKDMRKRLMVKFKGEEGLDYGGVAREWLHLLSREMLNPQYGLFQYSRDDHYTLQINPDSGVNPDHLSYFHFVGRTLGIAV 803
BLAST of DC900315 vs. ExPASy Swiss-Prot
Match: PUB2_SCHPO (E3 ubiquitin-protein ligase pub2 OS=Schizosaccharomyces pombe GN=pub2 PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 4.166e-14 Identity = 42/122 (34.43%), Postives = 73/122 (59.84%), Query Frame = 2 Query: 206 FRSKIKHQHDH-----HHSPLRISVRRAYILEDSYNQLRMRSTQDLKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNES-TFQPNPNSVYQTEHLSYFKFVGRVVGKAL 553 ++ KI + +D + + L++ V RA ED+Y+ + S D+K +L + F+ E+G+D GG++RE++ +LS IF+ G LF +++ Q +P S + SYF+FVGRV+G A+ Sbjct: 297 YQRKIAYMYDRPEMAVNDAQLQLKVSRATTFEDAYDIISKLSVSDMKKKLLIRFRNEDGLDYGGVSREFFYILSHAIFNPGYSLFEYATDDNYGLQISPLSSVNPDFRSYFRFVGRVMGLAI 418
BLAST of DC900315 vs. ExPASy Swiss-Prot
Match: HECW2_MOUSE (E3 ubiquitin-protein ligase HECW2 OS=Mus musculus GN=Hecw2 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 7.106e-14 Identity = 46/127 (36.22%), Postives = 78/127 (61.42%), Query Frame = 2 Query: 182 DFDNKRAHFRSKIKHQ-HDHHHSPLRISVRRAYILEDSYNQLRMRSTQDL-KGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNES-TFQPNPNSVYQTEHLSYFKFVGRVVGKAL 553 DF+ K +F K++ + + L++ +RR ++LED++NQ+ S +DL + +L V F GEEG+D G +RE++ L+SR +F+ LF N++ T Q +P S + H +F+F GR++G AL Sbjct: 1198 DFEAKLRNFYRKLETKGYGQGPGKLKLIIRRDHLLEDAFNQIMGYSRKDLQRNKLYVTFVGEEGLDYSGPSREFFFLVSRELFNPYYGLFEYSANDTYTVQISPMSAFVDNHHEWFRFSGRILGLAL 1324
BLAST of DC900315 vs. ExPASy Swiss-Prot
Match: HECW2_HUMAN (E3 ubiquitin-protein ligase HECW2 OS=Homo sapiens GN=HECW2 PE=1 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 7.106e-14 Identity = 46/127 (36.22%), Postives = 78/127 (61.42%), Query Frame = 2 Query: 182 DFDNKRAHFRSKIKHQ-HDHHHSPLRISVRRAYILEDSYNQLRMRSTQDL-KGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNES-TFQPNPNSVYQTEHLSYFKFVGRVVGKAL 553 DF+ K +F K++ + + L++ +RR ++LED++NQ+ S +DL + +L V F GEEG+D G +RE++ L+SR +F+ LF N++ T Q +P S + H +F+F GR++G AL Sbjct: 1192 DFEAKLRNFYRKLETKGYGQGPGKLKLIIRRDHLLEDAFNQIMGYSRKDLQRNKLYVTFVGEEGLDYSGPSREFFFLVSRELFNPYYGLFEYSANDTYTVQISPMSAFVDNHHEWFRFSGRILGLAL 1318 The following BLAST results are available for this feature:
BLAST of DC900315 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900315 ID=DC900315; Name=DC900315; organism=Citrus sinensis; type=EST; length=569bpback to top |