DC900315
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900315 vs. ExPASy Swiss-Prot
Match: HECW1_HUMAN (E3 ubiquitin-protein ligase HECW1 OS=Homo sapiens GN=HECW1 PE=1 SV=3) HSP 1 Score: 73.9442 bits (180), Expect = 6.016e-13 Identity = 49/148 (33.11%), Postives = 85/148 (57.43%), Query Frame = 2 Query: 119 RQNPGLLEKSFSLMLKVPRFVDFDNKRAHFRSKIKHQ-HDHHHSPLRISVRRAYILEDSYNQLRMRSTQDL-KGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNES-TFQPNPNSVYQTEHLSYFKFVGRVVGKAL 553 + +PGL + S P DF+ K +F K++ + +++ +RR ++LE ++NQ+ S ++L + +L V F GEEG+D G +RE++ LLS+ +F+ LF N++ T Q +P S + HL +F+F GR++G AL Sbjct: 1207 QNSPGL--QRASARAPSPYRRDFEAKLRNFYRKLEAKGFGQGPGKIKLIIRRDHLLEGTFNQVMAYSRKELQRNKLYVTFVGEEGLDYSGPSREFFFLLSQELFNPYYGLFEYSANDTYTVQISPMSAFVENHLEWFRFSGRILGLAL 1352
BLAST of DC900315 vs. ExPASy Swiss-Prot
Match: K0317_MOUSE (Protein KIAA0317 OS=Mus musculus GN=Kiaa0317 PE=2 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.026e-12 Identity = 55/164 (33.54%), Postives = 77/164 (46.95%), Query Frame = 2 Query: 74 VRFSEKHRKLLNA-FIRQNPGLLEKSFSLMLKVPRFVDFDNKRAHFRSKIKHQH-DHHHSPLRISVRRAYILEDSYNQLRMRSTQDLKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFT--TVGNESTFQPNPNSVYQTEHLSYFKFVGRVVGKAL 553 V S K R +L A FIR SL + F +K F+ +++ H HS + + V R +LE S R S D V FQ EE +D GG REW++L+ + +FD + LF T N++ PNPN L ++F GR+VGK L Sbjct: 411 VELSCKERNILAATFIR----------SLHKNIGGSETFQDKVNFFQRELRQVHMKRPHSKVTLKVSRHALLESSLKATRNFSISDWSKNFEVVFQDEEALDWGGPRREWFELICKALFDTTSQLFARFTDSNQALVHPNPNRPAHL-RLKMYEFAGRLVGKCL 563
BLAST of DC900315 vs. ExPASy Swiss-Prot
Match: K0317_HUMAN (Protein KIAA0317 OS=Homo sapiens GN=KIAA0317 PE=2 SV=3) HSP 1 Score: 72.4034 bits (176), Expect = 1.750e-12 Identity = 55/164 (33.54%), Postives = 77/164 (46.95%), Query Frame = 2 Query: 74 VRFSEKHRKLLNA-FIRQNPGLLEKSFSLMLKVPRFVDFDNKRAHFRSKIKHQH-DHHHSPLRISVRRAYILEDSYNQLRMRSTQDLKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFT--TVGNESTFQPNPNSVYQTEHLSYFKFVGRVVGKAL 553 V S K R +L A FIR SL + F +K F+ +++ H HS + + V R +LE S R S D V FQ EE +D GG REW++L+ + +FD LFT + N++ PNPN L ++F GR+VGK L Sbjct: 411 VELSCKERNILAATFIR----------SLHKNIGGSETFQDKVNFFQRELRQVHMKRPHSKVTLKVSRHALLESSLKATRNFSISDWSKNFEVVFQDEEALDWGGPRREWFELICKALFDTTNQLFTRFSDNNQALVHPNPNRPAHL-RLKMYEFAGRLVGKCL 563
BLAST of DC900315 vs. ExPASy Swiss-Prot
Match: HUWE1_RAT (E3 ubiquitin-protein ligase HUWE1 (Fragment) OS=Rattus norvegicus GN=Huwe1 PE=1 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 3.899e-12 Identity = 36/66 (54.55%), Postives = 46/66 (69.70%), Query Frame = 2 Query: 359 EEGIDAGGLTREWYQLLSRVIFDKGALLF-TTVGNESTFQPNPNSVYQTEHLSYFKFVGRVVGKAL 553 EEG DAGGL REWY ++SR +F+ LF T+ G+ T+ NP+S HLSYFKFVGR+V KA+ Sbjct: 1 EEGQDAGGLLREWYMIISREMFNPMYALFRTSPGDRVTYTINPSSHCNPNHLSYFKFVGRIVAKAV 66
BLAST of DC900315 vs. ExPASy Swiss-Prot
Match: UBE3B_XENTR (Ubiquitin-protein ligase E3B OS=Xenopus tropicalis GN=ube3b PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.092e-12 Identity = 50/179 (27.93%), Postives = 84/179 (46.93%), Query Frame = 2 Query: 38 HGTKVDEKQIAFVRFSEKHRKLLNAFIRQNPGLLEKSFSLMLKVPRFVDFDNKRAHFRSKIKHQHDHHHSP--LRISVRRAYILEDSYNQLRMRSTQDLKGRLTVHFQG-----EEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNESTFQPNPNSVYQTEHLSYFKFVGRVVGKAL 553 H + D K + +K RK ++ P ++ ++L F N + K+ + SP I++RR+ +LED Y+QLR S +KG + V F E GID G+ +E+ + + + +FD LF T + P+P S +L F+FVG+++GKA+ Sbjct: 619 HWLRKDLKPTLLFQELDKERKRAQLLLQYIPHVIPHKNRVLL-------FRNIVTKEKEKLGLVETNTASPHVTHITIRRSRMLEDGYDQLRQLSQNAMKGVIRVKFVNDLGVDEAGIDQDGVFKEFLEEIIKRVFDPALNLFKTTSSGDRLYPSPTSYIHENYLQLFEFVGKMLGKAV 790
BLAST of DC900315 vs. ExPASy Swiss-Prot
Match: HECW1_MOUSE (E3 ubiquitin-protein ligase HECW1 OS=Mus musculus GN=Hecw1 PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 5.092e-12 Identity = 47/148 (31.76%), Postives = 85/148 (57.43%), Query Frame = 2 Query: 119 RQNPGLLEKSFSLMLKVPRFVDFDNKRAHFRSKIKHQ-HDHHHSPLRISVRRAYILEDSYNQLRMRSTQDL-KGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNES-TFQPNPNSVYQTEHLSYFKFVGRVVGKAL 553 + +PGL + S P DF+ K +F K++ + +++ +RR ++LE ++NQ+ S ++L + +L + F GEEG+D G +RE++ LLS+ +F+ LF N++ T Q +P S + +L +F+F GR++G AL Sbjct: 1205 QNSPGL--QRASARAPSPYRRDFEAKLRNFYRKLEAKGFGQGPGKVKLIIRRDHLLEGTFNQVMAYSRKELQRNKLYITFVGEEGLDYSGPSREFFFLLSQELFNPYYGLFEYSANDTYTVQISPMSAFVENYLEWFRFSGRILGLAL 1350
BLAST of DC900315 vs. ExPASy Swiss-Prot
Match: UBE3B_MOUSE (Ubiquitin-protein ligase E3B OS=Mus musculus GN=Ube3b PE=2 SV=3) HSP 1 Score: 70.4774 bits (171), Expect = 6.651e-12 Identity = 37/104 (35.58%), Postives = 58/104 (55.77%), Query Frame = 2 Query: 257 ISVRRAYILEDSYNQLRMRSTQDLKGRLTVHFQG-----EEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNESTFQPNPNSVYQTEHLSYFKFVGRVVGKAL 553 I++RR+ +LED Y QLR S +KG + V F E GID G+ +E+ + + + +FD LF T + P+P S +L F+FVG+++GKA+ Sbjct: 685 ITIRRSRMLEDGYEQLRQLSQHAMKGVIRVKFVNDLGVDEAGIDQDGVFKEFLEEIIKRVFDPALNLFKTTSGDERLYPSPTSYIHENYLQLFEFVGKMLGKAV 788
BLAST of DC900315 vs. ExPASy Swiss-Prot
Match: UBE3B_HUMAN (Ubiquitin-protein ligase E3B OS=Homo sapiens GN=UBE3B PE=1 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 6.651e-12 Identity = 37/104 (35.58%), Postives = 58/104 (55.77%), Query Frame = 2 Query: 257 ISVRRAYILEDSYNQLRMRSTQDLKGRLTVHFQG-----EEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNESTFQPNPNSVYQTEHLSYFKFVGRVVGKAL 553 I++RR+ +LED Y QLR S +KG + V F E GID G+ +E+ + + + +FD LF T + P+P S +L F+FVG+++GKA+ Sbjct: 683 ITIRRSRMLEDGYEQLRQLSQHAMKGVIRVKFVNDLGVDEAGIDQDGVFKEFLEEIIKRVFDPALNLFKTTSGDERLYPSPTSYIHENYLQLFEFVGKMLGKAV 786
BLAST of DC900315 vs. ExPASy Swiss-Prot
Match: UPL6_ARATH (E3 ubiquitin-protein ligase UPL6 OS=Arabidopsis thaliana GN=UPL6 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.935e-11 Identity = 42/144 (29.17%), Postives = 74/144 (51.39%), Query Frame = 2 Query: 155 LMLKVPRFVDFDNKRAHFRSKIKHQHDHHHSP-----LRISVRRAYILEDSYNQLRMRSTQDLKGRLTVHFQGE-----EGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNESTFQPNPNS-VYQTEHLSYFKFVGRVVGKAL 553 ++++ P + F ++ F +++ H S R +RR +ILED+YNQ+ S DL+ + V F E GID GG+ +++ + ++R FD LF + + PNP S + +HL +F F+G ++ KA+ Sbjct: 630 ILMQAPFLIPFTSRVKIFTTQLATARQSHGSQGIFARNRFRIRRDHILEDAYNQMSALSEDDLRSSIRVTFVNELGVEEAGIDGGGIFKDFMEKITRAAFDVQYGLFKETADHMLY-PNPGSGMIHEQHLQFFHFLGSLLAKAM 772
BLAST of DC900315 vs. ExPASy Swiss-Prot
Match: UBE3A_HUMAN (Ubiquitin-protein ligase E3A OS=Homo sapiens GN=UBE3A PE=1 SV=4) HSP 1 Score: 68.1662 bits (165), Expect = 3.301e-11 Identity = 41/109 (37.61%), Postives = 68/109 (62.39%), Query Frame = 2 Query: 251 LRISVRRAYILEDSYNQLRMRSTQ---DLKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNESTFQPNPNSVYQTEHLSYFKFVGRVVGKALCAVCI 568 LR+ VRR +I++D+ +L M + + DLK +L V F+GE+G+D GG+++E++QL+ IF+ +FT + F NP+S ++TE F +G V+G A+ CI Sbjct: 523 LRLKVRRDHIIDDALVRLEMIAMENPADLKKQLYVEFEGEQGVDEGGVSKEFFQLVVEEIFNPDIGMFTYDESTKLFWFNPSS-FETE--GQFTLIGIVLGLAIYNNCI 628 The following BLAST results are available for this feature:
BLAST of DC900315 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900315 ID=DC900315; Name=DC900315; organism=Citrus sinensis; type=EST; length=569bpback to top |