DC900313
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_RICAH (60 kDa chaperonin OS=Rickettsia akari (strain Hartford) GN=groL PE=3 SV=1) HSP 1 Score: 261.922 bits (668), Expect = 4.347e-69 Identity = 135/243 (55.56%), Postives = 179/243 (73.66%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEA 730 +D+A+LT G+LITE+LGM LE V++ LGT K+VT+SK++TVI+DG+GDKK+IE+R QI+S I +TSDYDKEKLQERLAKLSGGVAVLK+GGA+E EV E+KDRV DAL AT+AAVEEG+V GGGV N DQ+ G++I+ ALK P+ I KLLE ++ + G++A +YVDM+K+GIIDP KV+RTAL DAASV+SL+ TTE ++V+ P + ++A Sbjct: 290 EDIAILTKGELITEDLGMKLENVSIKSLGTAKRVTVSKENTVIVDGSGDKKNIEDRVLQIKSQIAETTSDYDKEKLQERLAKLSGGVAVLKVGGATEVEVKERKDRVEDALAATRAAVEEGVVAGGGVTLLHASQTLTKLKVENKDQQAGIEIVIEALKDPLKQIIENAGENGGVVVGKLLEHNDKNYGFNAQDMQYVDMIKAGIIDPAKVVRTALQDAASVASLIITTETLIVDEPSDKEDA 532
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH602_SPHAL (60 kDa chaperonin 2 OS=Sphingopyxis alaskensis GN=groL2 PE=3 SV=1) HSP 1 Score: 261.922 bits (668), Expect = 4.347e-69 Identity = 131/244 (53.69%), Postives = 176/244 (72.13%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEAP 733 +D+A+LTGG++++E+LG+ LE V ++MLG KKV I KD+T I+DG G + I+ R QIR I+ +TSDYD+EKLQERLAKL+GGVAV+++GGA+E EV E+KDRV DAL+AT+AAVEEGI+PGGG+ AN DQ+ G+ I++ AL+ P I KLLE + + G++AA GEY D+VK+G+IDP KV+RTAL DAASV++L+ TTEA+V ELPKE K AP Sbjct: 290 EDIAILTGGNVVSEDLGIKLENVTVNMLGRAKKVVIDKDNTTIVDGVGARTDIDARIAQIRQQIDTTTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDALHATRAAVEEGILPGGGIALLRALKALDGLKAANDDQQSGIDIVRRALRAPARQIADNAGEDGAWIVGKLLESSDYNWGFNAATGEYEDLVKAGVIDPAKVVRTALQDAASVAALLITTEALVAELPKEEKAAP 533
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH604_RHIME (60 kDa chaperonin 4 OS=Rhizobium meliloti GN=groL4 PE=3 SV=1) HSP 1 Score: 261.151 bits (666), Expect = 7.414e-69 Identity = 137/244 (56.15%), Postives = 177/244 (72.54%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEAP 733 +D+A+LTGG +I+E+LG+ LE V LDMLG KKV+I+K++T I+DGAG K IE R QI++ IE +TSDYD+EKLQERLAKL+GGVAV+++GGA+E EV EKKDR+ DALNAT+AAV+EGIVPGGGV N DQ GV I++ AL++P I K+LE++ D GY+A GEY DM+ GIIDP+KV+RTAL DAASV+SL+ TTEA++ ELPK K+AP Sbjct: 290 EDIAILTGGTVISEDLGIKLESVTLDMLGRAKKVSITKENTTIVDGAGQKSDIEGRVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRIDDALNATRAAVQEGIVPGGGVALLRSSVKITVKG-ENDDQDAGVNIVRRALQSPARQIVENAGDEASIVVGKILEKNTDDFGYNAQTGEYGDMIAMGIIDPVKVVRTALQDAASVASLLITTEAMIAELPK--KDAP 530
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH601_RHIME (60 kDa chaperonin 1 OS=Rhizobium meliloti GN=groL1 PE=2 SV=2) HSP 1 Score: 261.151 bits (666), Expect = 7.414e-69 Identity = 137/244 (56.15%), Postives = 177/244 (72.54%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEAP 733 +D+A+LTGG +I+E+LG+ LE V LDMLG KKV+I+K++T I+DGAG K IE R QI++ IE +TSDYD+EKLQERLAKL+GGVAV+++GGA+E EV EKKDR+ DALNAT+AAV+EGIVPGGGV N DQ GV I++ AL++P I K+LE++ D GY+A GEY DM+ GIIDP+KV+RTAL DAASV+SL+ TTEA++ ELPK K+AP Sbjct: 290 EDIAILTGGTVISEDLGIKLESVTLDMLGRAKKVSITKENTTIVDGAGQKSDIEGRVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRIDDALNATRAAVQEGIVPGGGVALLRSSVKITVKG-ENDDQDAGVNIVRRALQSPARQIVENAGDEASIVVGKILEKNTDDFGYNAQTGEYGDMIAMGIIDPVKVVRTALQDAASVASLLITTEAMIAELPK--KDAP 530
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_RICCN (60 kDa chaperonin OS=Rickettsia conorii GN=groL PE=3 SV=1) HSP 1 Score: 260.766 bits (665), Expect = 9.683e-69 Identity = 137/244 (56.15%), Postives = 175/244 (71.72%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEAP 733 +D+A+LT G+LITE+LGM LE V++ LGT K+VTISK++TVI+DG GDKK+IE+R QI+S I +TSDYDKEKLQERLAKLSGGVAVLK+GGA+E EV E+KDRV DAL AT+AAVEEG+V GGGV N DQ+ G++I+ ALK P+ I KLLE + + G++A +YVDM+K+GIIDP KV+RTAL DAASV+SL+ TTE ++V+ P K P Sbjct: 290 EDIAILTKGELITEDLGMKLENVSIKSLGTAKRVTISKENTVIVDGNGDKKNIEDRVLQIKSQIAETTSDYDKEKLQERLAKLSGGVAVLKVGGATEVEVKERKDRVEDALAATRAAVEEGVVAGGGVTLLHASQPLTKLKVENKDQQAGIEIVIEALKDPLKQIVENAGENGGVVVGKLLEHKDKNYGFNAQDMQYVDMIKAGIIDPAKVVRTALQDAASVASLIITTETLIVDEPSSDKAEP 533
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_RICCK (60 kDa chaperonin OS=Rickettsia canadensis (strain McKiel) GN=groL PE=3 SV=1) HSP 1 Score: 260.766 bits (665), Expect = 9.683e-69 Identity = 136/244 (55.74%), Postives = 177/244 (72.54%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEAP 733 +D+A+LT G+LITE+LGM LE V++ LGT K+VTISK++TVI+DG+GDKKSIE+R QI+S I +TSDYDKEKLQERLAKLSGGVAVLK+GGA+E EV E+KDRV DAL AT+AAVEEG+V GGGV N DQ+ G++I+ ALK P+ I KLLE + + G++A +YVDM+++GIIDP KV+RTAL DAASV+SL+ TTE ++V+ P + + P Sbjct: 290 EDIAILTKGELITEDLGMKLENVSIKSLGTAKRVTISKENTVIVDGSGDKKSIEDRVLQIKSQIAETTSDYDKEKLQERLAKLSGGVAVLKVGGATEVEVKERKDRVEDALAATRAAVEEGVVAGGGVTLLHTSQILTKLKVENKDQQAGIEIVIEALKDPLKQIVENAGENGGVVVGKLLEHKDKNFGFNAQDMQYVDMIQAGIIDPAKVVRTALQDAASVASLIITTETLIVDEPSKEEPMP 533
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_RICBR (60 kDa chaperonin OS=Rickettsia bellii (strain RML369-C) GN=groL PE=3 SV=1) HSP 1 Score: 260.766 bits (665), Expect = 9.683e-69 Identity = 139/244 (56.97%), Postives = 177/244 (72.54%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEAP 733 +D+A+LT G+LITE+LGM LE V+L LG K+VTISK++TVI+DG+GDKK+IEER QI+S I +TSDYDKEKLQERLAKLSGGVAVLK+GGA+E EV E+KDRV DAL AT+AAVEEG+V GGGV N DQ+ G++++ ALK P+ I KLLE + + G++A +YVDM+K+GIIDP KV+RTAL DAASV+SL+ TTE ++V+ P E KE P Sbjct: 290 EDIAILTNGELITEDLGMKLENVSLKSLGHAKRVTISKENTVIVDGSGDKKNIEERVLQIKSHIAETTSDYDKEKLQERLAKLSGGVAVLKVGGATEVEVKERKDRVEDALAATRAAVEEGVVAGGGVTLLHASQALKNLKVDNKDQQAGIELVIEALKDPIKQIVENAGENGGVVVGKLLEHKDKNFGFNAQDMQYVDMIKAGIIDPAKVVRTALQDAASVASLIITTETLIVDEP-EDKENP 532
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_RICB8 (60 kDa chaperonin OS=Rickettsia bellii (strain OSU 85-389) GN=groL PE=3 SV=1) HSP 1 Score: 260.766 bits (665), Expect = 9.683e-69 Identity = 139/244 (56.97%), Postives = 177/244 (72.54%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEAP 733 +D+A+LT G+LITE+LGM LE V+L LG K+VTISK++TVI+DG+GDKK+IEER QI+S I +TSDYDKEKLQERLAKLSGGVAVLK+GGA+E EV E+KDRV DAL AT+AAVEEG+V GGGV N DQ+ G++++ ALK P+ I KLLE + + G++A +YVDM+K+GIIDP KV+RTAL DAASV+SL+ TTE ++V+ P E KE P Sbjct: 290 EDIAILTNGELITEDLGMKLENVSLKSLGHAKRVTISKENTVIVDGSGDKKNIEERVLQIKSHIAETTSDYDKEKLQERLAKLSGGVAVLKVGGATEVEVKERKDRVEDALAATRAAVEEGVVAGGGVTLLHASQALKNLKVDNKDQQAGIELVIEALKDPIKQIVENAGENGGVVVGKLLEHKDKNFGFNAQDMQYVDMIKAGIIDPAKVVRTALQDAASVASLIITTETLIVDEP-EDKENP 532
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_PARL1 (60 kDa chaperonin OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=groL PE=3 SV=1) HSP 1 Score: 259.61 bits (662), Expect = 2.157e-68 Identity = 135/243 (55.56%), Postives = 172/243 (70.78%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEA 730 +DLAVL+GG +I+E+LG+ LE V LDMLG K+V+I+KDDT I+DGAG KK IE R QI+ IE++TSDYDKEKLQERLAKL+GGVAV+K+GGA+EAEV E+KDRV DALNAT+AAVEEGIVPGGG N D + G+ II+ AL+ P+ I K+LE + G+DA K EY D+V +GIIDP KV+RTAL DAAS++ L+ TTEA++ + PK+ A Sbjct: 289 EDLAVLSGGQVISEDLGIKLESVTLDMLGKAKRVSITKDDTTIVDGAGKKKDIEARVAQIKRQIEDTTSDYDKEKLQERLAKLAGGVAVIKVGGATEAEVKERKDRVDDALNATRAAVEEGIVPGGGTALLMASKAVGKLVEDNRDIQAGINIIRRALEAPIRQIVENAGVEGSIVVQKVLESKQANFGFDAQKEEYCDLVAAGIIDPTKVVRTALQDAASIAGLLITTEAMIADAPKKDNGA 531
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_RICRS (60 kDa chaperonin OS=Rickettsia rickettsii (strain Sheila Smith) GN=groL PE=3 SV=1) HSP 1 Score: 259.225 bits (661), Expect = 2.817e-68 Identity = 136/242 (56.20%), Postives = 175/242 (72.31%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKE 727 +D+A+LT G+LITE+LGM LE V++ LGT K+VTISK++TVI+DG GDKK+IE+R QI+S I +TSDYDKEKLQERLAKLSGGVAVLK+GGA+E EV E+KDRV DAL AT+AAVEEG+V GGGV N DQ+ G++I+ ALK P+ I KLLE + + G++A +YVDM+K+GIIDP KV+RTAL DAASV+SL+ TTE ++V+ P + E Sbjct: 290 EDIAILTKGELITEDLGMKLENVSIKSLGTAKRVTISKENTVIVDGNGDKKNIEDRVLQIKSQIAETTSDYDKEKLQERLAKLSGGVAVLKVGGATEVEVKERKDRVEDALAATRAAVEEGVVAGGGVTLLHASQPLTKLKVENKDQQAGIEIVIEALKDPLKQIVENAGENGGVVVGKLLEHKDKNYGFNAQDMQYVDMIKAGIIDPAKVVRTALQDAASVASLIITTETLIVDEPSDKAE 531 The following BLAST results are available for this feature:
BLAST of DC900313 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DC900313 ID=DC900313; Name=DC900313; organism=Citrus sinensis; type=EST; length=1041bpback to top |