DC900313
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_ORITI (60 kDa chaperonin OS=Orientia tsutsugamushi (strain Ikeda) GN=groL PE=3 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 2.238e-57 Identity = 118/239 (49.37%), Postives = 162/239 (67.78%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVN-LDMLGTCKKVTISKDDTVILDGAGD---KKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVE 706 +D+A+LT G++ITE+LG+ LEKVN LGT +V ++KD T I+ + +K + RCEQIR AI+++TSDY+KEKLQERLAKL GVAVLK+GGA+E E E+KDRV DAL+AT+AAVEEGIVPGGGV N DQ++G+ II+ L+ PV I +L + ++ + G+DA +YVDM+K+GI+DP KV+RTAL DA SV+SL+ T A++ + Sbjct: 289 EDIAILTNGEVITEQLGIKLEKVNDTSKLGTANRVIVTKDHTTIVHDKNNSDIEKKVNSRCEQIREAIKDTTSDYEKEKLQERLAKLRNGVAVLKVGGATEVEQKERKDRVEDALHATRAAVEEGIVPGGGVALFYASRVLDSLKFDNEDQRVGINIIKKVLEAPVRQIVKNAGGKEDVVVNELSKSNDKNRGFDARTMQYVDMIKAGIVDPTKVVRTALQDAFSVASLVIATSAMITD 527
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_ORITB (60 kDa chaperonin OS=Orientia tsutsugamushi (strain Boryong) GN=groL PE=3 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 2.238e-57 Identity = 118/239 (49.37%), Postives = 162/239 (67.78%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVN-LDMLGTCKKVTISKDDTVILDGAGD---KKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVE 706 +D+A+LT G++ITE+LG+ LEKVN LGT +V ++KD T I+ + +K + RCEQIR AI+++TSDY+KEKLQERLAKL GVAVLK+GGA+E E E+KDRV DAL+AT+AAVEEGIVPGGGV N DQ++G+ II+ L+ PV I +L + ++ + G+DA +YVDM+K+GI+DP KV+RTAL DA SV+SL+ T A++ + Sbjct: 289 EDIAILTNGEVITEQLGIKLEKVNDTSKLGTANRVIVTKDHTTIVHDKNNSDIEKKVNSRCEQIREAIKDTTSDYEKEKLQERLAKLRNGVAVLKVGGATEVEQKERKDRVEDALHATRAAVEEGIVPGGGVALFYASRVLDSLKFDNEDQRVGINIIKKVLEAPVRQIVKNAGGKEDVVVNELSKSNDKNRGFDARTMQYVDMIKAGIVDPTKVVRTALQDAFSVASLVIATSAMITD 527
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_HELPG (60 kDa chaperonin OS=Helicobacter pylori (strain G27) GN=groL PE=3 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 2.238e-57 Identity = 125/244 (51.23%), Postives = 163/244 (66.80%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEAP 733 +D+AVLTGG +I+EELG+ LE ++ LG ++ I KD+T I+DG G +++R QI++ I ++TSDYDKEKLQERLAKLSGGVAV+K+G ASE E+ EKKDRV DAL+ATKAAVEEGIV GGG + D+K+G +II A+K P+ I + +E+ G++A+ G+YVDM K GIIDPLKV R AL +A SVSSL+ TTEA V E+ KE K AP Sbjct: 289 KDIAVLTGGQVISEELGLSLENAEVEFLGKAGRIVIDKDNTTIVDGKGHSDDVKDRVAQIKTQIASTTSDYDKEKLQERLAKLSGGVAVIKVGAASEVEMKEKKDRVDDALSATKAAVEEGIVIGGGAALIRAAQKVHL--NLHDDEKVGYEIIMRAIKAPLAQIAINAGYDGGVVVNE-VEKHEGHFGFNASNGKYVDMFKEGIIDPLKVERIALQNAVSVSSLLLTTEATVHEI-KEEKAAP 528
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_GEOSM (60 kDa chaperonin OS=Geobacter sp. (strain M21) GN=groL PE=3 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 2.238e-57 Identity = 120/244 (49.18%), Postives = 163/244 (66.80%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEAP 733 +D+A+LTGG +I+EE+G LE LDMLG KK+T+ KD+T I+DG G + I+ R + IR+ I+ ++SDYD+EKLQERLAKL GGVAV+K+G A+E E+ EKK RV DAL+AT+AAV+EGIVPGGGV A +Q+ GV +I+ AL+ P+ I K ++ GY+AA YVDM+++GIIDP KV R+AL +AASV+ LM TTEA++ + PKE P Sbjct: 290 EDIAILTGGKVISEEVGFKLENTTLDMLGQAKKITVDKDNTTIIDGFGAEADIQGRVKMIRAQIDETSSDYDREKLQERLAKLVGGVAVIKVGAATEIEMKEKKARVEDALHATRAAVDEGIVPGGGVAYLRAMKVLENLQLAP-EQQFGVNVIKRALEEPIRQISQNAGVDGSIVVDK-VKNGKDAFGYNAADDVYVDMIEAGIIDPTKVSRSALQNAASVAGLMMTTEAMIADKPKEEGAMP 531
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_GEOBB (60 kDa chaperonin OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=groL PE=3 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 2.238e-57 Identity = 120/244 (49.18%), Postives = 163/244 (66.80%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEAP 733 +D+A+LTGG +I+EE+G LE LDMLG KK+T+ KD+T I+DG G + I+ R + IR+ I+ ++SDYD+EKLQERLAKL GGVAV+K+G A+E E+ EKK RV DAL+AT+AAV+EGIVPGGGV A +Q+ GV +I+ AL+ P+ I K ++ GY+AA YVDM+++GIIDP KV R+AL +AASV+ LM TTEA++ + PKE P Sbjct: 290 EDIAILTGGKVISEEVGFKLENTTLDMLGQAKKITVDKDNTTIIDGYGAEADIQGRVKMIRAQIDETSSDYDREKLQERLAKLVGGVAVIKVGAATEIEMKEKKARVEDALHATRAAVDEGIVPGGGVAYLRALKVLEKLQLAP-EQQFGVNVIKRALEEPIRQISQNAGVDGSIVVDK-VKNGKDAFGYNAADDVYVDMIEAGIIDPTKVSRSALQNAASVAGLMMTTEAMIADKPKEEGAMP 531
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_AMOPS (60 kDa chaperonin OS=Amoeba proteus symbiotic bacterium GN=groL PE=3 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 2.238e-57 Identity = 116/239 (48.54%), Postives = 163/239 (68.20%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKE 718 QD+A+LT G +I+EE+G LE +L+ LGT K++ ++K++T I+DG G I R QIR+ +E ++SDYD+EKLQER+AKL+GGVAV+K+G A+E E+ EKK RV DAL+AT+AAVEEGIV GGGV N DQ +G+ I++ A+++P+ I K+ E + + G++AA G+Y DMV+ GI+DP KV RTAL +AASV SLM TTE +V +LPK+ Sbjct: 289 QDIAILTNGQVISEEIGTSLETASLESLGTAKRIVVTKENTTIIDGEGKATEINARIAQIRAQMEETSSDYDREKLQERVAKLAGGVAVIKVGAATEIEMKEKKARVEDALHATRAAVEEGIVAGGGVALIRAQKVLDGLKGDNADQDMGINILRRAIESPLRQIVANAGYESSVIVNKVAEHKD-NFGFNAATGQYGDMVEMGILDPTKVTRTALQNAASVRSLMLTTECMVADLPKK 526
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH602_SORC5 (60 kDa chaperonin 2 OS=Sorangium cellulosum (strain So ce56) GN=groL2 PE=3 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 2.238e-57 Identity = 122/243 (50.21%), Postives = 165/243 (67.90%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEA 730 +D+A LT G +I EELG+ LE V + LG K V I KD+T I+ G G K I+ R ++IR+ IEN+TSDYD+EKLQERLAKL GGVAV+K+G A+E E+ EKK RV DAL+AT+AAVEEGIVPGGGV N +Q+ GV II+ A++ P+ I K+ + ++ GY+AA G+Y ++++ G+IDP+KV+R+AL +AASV+SLM TTEA++ E PKE K A Sbjct: 290 KDIATLTDGQVIAEELGLKLENVTISDLGRAKTVIIDKDNTTIVGGQGKKDKIKARQQEIRAQIENTTSDYDREKLQERLAKLVGGVAVVKVGAATETEMKEKKARVEDALHATRAAVEEGIVPGGGVALIRAQSSLEKLK-VNDEQRFGVNIIRRAIEEPLRQISANAGEEGSIVVQKVRDGKDS-YGYNAASGDYGNLLEMGVIDPVKVVRSALQNAASVASLMLTTEALIAERPKEEKPA 530
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH601_RHOFD (60 kDa chaperonin 1 OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=groL1 PE=3 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 2.238e-57 Identity = 118/243 (48.56%), Postives = 162/243 (66.67%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEA 730 +D+A+LTGG +I EE+GM LEKV L LG+ K++ + K++T+I+DGAG IE R +Q+R IE +TSDYD+EKLQER+AKL+GGVAV+K+G A+E E+ EKK RV DAL+AT+AAVEEGIV GGGV AN DQ G++++ A++ P+ I ++ + G++AA Y DM++ GI+DP KV RTAL +AASV+SLM TTE +V E PK+ A Sbjct: 290 EDIAILTGGKVIAEEVGMSLEKVTLADLGSAKRIEVGKENTIIIDGAGAAADIEARVKQVRVQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVAGGGVALLRAKQAVGTLKGANADQDAGIKLVMKAIEAPLREIVYNAGGEASVVVNAVM-AGKGNYGFNAANDTYGDMIEMGILDPTKVTRTALQNAASVASLMLTTECMVSESPKDDSAA 531
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_YERPY (60 kDa chaperonin OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=groL PE=3 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 2.922e-57 Identity = 117/243 (48.15%), Postives = 163/243 (67.08%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEA 730 QD+A LT G +I+EE+G++LEK L+ LG K+V I+KD T+I+DG GD+ +I+ R QIR IE++TSDYDKEKLQER+AKL+GGVAV+K+G A+E E+ EKK RV DAL+AT+AAVEEG+V GGGV N DQ +G+++ A+++P+ I K+ + + GY+A EY DM+ GI+DP KV R+AL AAS++ LM TTE +V +LP++ K A Sbjct: 290 QDIATLTAGTVISEEIGLELEKTTLEDLGQAKRVVINKDTTIIIDGVGDEAAIQGRVAQIRQQIEDATSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRAAHAIAGLKGDNEDQNVGIKVALRAMESPLRQIVVNAGEEASVIANKVKAGEGS-FGYNAYTEEYGDMIAMGILDPTKVTRSALQYAASIAGLMITTECMVTDLPRDDKGA 531
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_YERPS (60 kDa chaperonin OS=Yersinia pseudotuberculosis GN=groL PE=3 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 2.922e-57 Identity = 117/243 (48.15%), Postives = 163/243 (67.08%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEA 730 QD+A LT G +I+EE+G++LEK L+ LG K+V I+KD T+I+DG GD+ +I+ R QIR IE++TSDYDKEKLQER+AKL+GGVAV+K+G A+E E+ EKK RV DAL+AT+AAVEEG+V GGGV N DQ +G+++ A+++P+ I K+ + + GY+A EY DM+ GI+DP KV R+AL AAS++ LM TTE +V +LP++ K A Sbjct: 290 QDIATLTAGTVISEEIGLELEKTTLEDLGQAKRVVINKDTTIIIDGVGDEAAIQGRVAQIRQQIEDATSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRAAHAIAGLKGDNEDQNVGIKVALRAMESPLRQIVVNAGEEASVIANKVKAGEGS-FGYNAYTEEYGDMIAMGILDPTKVTRSALQYAASIAGLMITTECMVTDLPRDDKGA 531 The following BLAST results are available for this feature:
BLAST of DC900313 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DC900313 ID=DC900313; Name=DC900313; organism=Citrus sinensis; type=EST; length=1041bpback to top |