DC900313
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_MANSM (60 kDa chaperonin OS=Mannheimia succiniciproducens (strain MBEL55E) GN=groL PE=3 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 2.922e-57 Identity = 120/242 (49.59%), Postives = 162/242 (66.94%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTA-NFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXK 724 QD+A+LT G +I+EE+GM+LEK L+ LG K+V I+KD+T I+DG GD+ I+ R QIR IE STSDYDKEKLQER+AKL+GGVAV+K+G A+E E+ EKKDRV DAL+AT+AAVEEGIV GGGV N +Q +G+++ A+++P+ I ++ + GY+A +Y DM+ GI+DP KV R+AL AAS++ LM TTEA+V ELPK+ K Sbjct: 290 QDIAILTAGTVISEEIGMELEKATLEDLGQAKRVVINKDNTTIIDGIGDEAQIKGRVAQIRQQIEESTSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGIVAGGGVALIRAASKAAASLQGDNEEQNVGIKLALRAMESPLRQI-VANAGEEASVVASAVKNGEGNFGYNAGTEQYGDMIAMGILDPTKVTRSALQFAASIAGLMITTEAMVTELPKDDK 530
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_HELPY (60 kDa chaperonin OS=Helicobacter pylori GN=groL PE=3 SV=2) HSP 1 Score: 222.631 bits (566), Expect = 2.922e-57 Identity = 124/244 (50.82%), Postives = 163/244 (66.80%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEAP 733 +D+A+LTGG +I+EELG+ LE ++ LG ++ I KD+T I+DG G +++R QI++ I ++TSDYDKEKLQERLAKLSGGVAV+K+G ASE E+ EKKDRV DAL+ATKAAVEEGIV GGG + D+K+G +II A+K P+ I + +E+ G++A+ G+YVDM K GIIDPLKV R AL +A SVSSL+ TTEA V E+ KE K AP Sbjct: 289 KDIAILTGGQVISEELGLSLENAEVEFLGKAGRIVIDKDNTTIVDGKGHSHDVKDRVAQIKTQIASTTSDYDKEKLQERLAKLSGGVAVIKVGAASEVEMKEKKDRVDDALSATKAAVEEGIVIGGGAALIRAAQKVHL--NLHDDEKVGYEIIMRAIKAPLAQIAINAGYDGGVVVNE-VEKHEGHFGFNASNGKYVDMFKEGIIDPLKVERIALQNAVSVSSLLLTTEATVHEI-KEEKAAP 528
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_HELPH (60 kDa chaperonin OS=Helicobacter pylori (strain HPAG1) GN=groL PE=3 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 2.922e-57 Identity = 124/244 (50.82%), Postives = 163/244 (66.80%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEAP 733 +D+A+LTGG +I+EELG+ LE ++ LG ++ I KD+T I+DG G +++R QI++ I ++TSDYDKEKLQERLAKLSGGVAV+K+G ASE E+ EKKDRV DAL+ATKAAVEEGIV GGG + D+K+G +II A+K P+ I + +E+ G++A+ G+YVDM K GIIDPLKV R AL +A SVSSL+ TTEA V E+ KE K AP Sbjct: 289 KDIAILTGGQVISEELGLSLENAEVEFLGKAGRIVIDKDNTTIVDGKGHSDDVKDRVAQIKTQIASTTSDYDKEKLQERLAKLSGGVAVIKVGAASEVEMKEKKDRVDDALSATKAAVEEGIVIGGGAALIRAAQKVHL--NLHDDEKVGYEIIMRAIKAPLAQIAINAGYDGGVVVNE-VEKHEGHFGFNASNGKYVDMFKEGIIDPLKVERIALQNAVSVSSLLLTTEATVHEI-KEEKAAP 528
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_HALOH (60 kDa chaperonin OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=groL PE=3 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 2.922e-57 Identity = 113/235 (48.09%), Postives = 163/235 (69.36%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVE 706 +D+A+LTGG +ITE+LG+ LE ++ MLG KVT++K+DT I++GAGD K I+ R +QIR+ IEN+ SD+D+EKLQERLAKL+GGVAV+K+G A+E E+ EKK R+ DAL+AT+AAVEEG+V GGG + D+ GV I++ AL+ PV I K+ +D +G+DA GE+V+M++SGI+DP KV R+AL +AAS ++++ TTE +V + Sbjct: 289 EDIAILTGGQVITEDLGLKLENADISMLGRAHKVTVTKEDTTIVEGAGDSKEIQNRIKQIRTQIENTDSDFDREKLQERLAKLAGGVAVIKVGAATETELKEKKHRIEDALSATRAAVEEGLVAGGGTTLIDAIPALDELNLEG-DEATGVDIVRKALEAPVRLIADNAGYEGSVIVEKVKSEDK-GIGFDAYNGEFVNMIESGIVDPAKVTRSALQNAASAAAMLLTTECLVAD 521
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_BACFR (60 kDa chaperonin OS=Bacteroides fragilis GN=groL PE=3 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 2.922e-57 Identity = 118/244 (48.36%), Postives = 162/244 (66.39%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEAP 733 +D+AVLTGG +I+EE G+ LE+ ++MLGT KVT+SKD+T I++GAG K++I+ERC+QI++ I + SDYD+EKLQERLAKLSGGVAVL +G ASE E+ EKKDRV DAL AT+AA+EEGIV GGGV N D+ G+ II+ A++ P+ I K+ E D GY+A Y +M +G++DP KV R AL +AAS++ + TTE ++VE ++ E P Sbjct: 290 EDIAVLTGGVVISEEKGLKLEQATIEMLGTADKVTVSKDNTTIVNGAGAKENIKERCDQIKAQIAATKSDYDREKLQERLAKLSGGVAVLYVGAASEVEMKEKKDRVDDALRATRAAIEEGIVAGGGVAYIRAIESLDGLKGENDDETTGIAIIKRAIEEPLRQIVANAGKEGAVVVQKVSE-GKGDFGYNARTDVYENMHAAGVVDPAKVTRVALENAASIAGMFLTTECVIVEKKEDKPEMP 532
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_BACFN (60 kDa chaperonin OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=groL PE=3 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 2.922e-57 Identity = 118/244 (48.36%), Postives = 162/244 (66.39%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEAP 733 +D+AVLTGG +I+EE G+ LE+ ++MLGT KVT+SKD+T I++GAG K++I+ERC+QI++ I + SDYD+EKLQERLAKLSGGVAVL +G ASE E+ EKKDRV DAL AT+AA+EEGIV GGGV N D+ G+ II+ A++ P+ I K+ E D GY+A Y +M +G++DP KV R AL +AAS++ + TTE ++VE ++ E P Sbjct: 290 EDIAVLTGGVVISEEKGLKLEQATIEMLGTADKVTVSKDNTTIVNGAGAKENIKERCDQIKAQIAATKSDYDREKLQERLAKLSGGVAVLYVGAASEVEMKEKKDRVDDALRATRAAIEEGIVAGGGVAYIRAIESLDGLKGENDDETTGIAIIKRAIEEPLRQIVANAGKEGAVVVQKVSE-GKGDFGYNARTDVYENMHAAGVVDPAKVTRVALENAASIAGMFLTTECVIVEKKEDKPEMP 532
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_AGGAC (60 kDa chaperonin OS=Aggregatibacter actinomycetemcomitans GN=groL PE=1 SV=3) HSP 1 Score: 222.631 bits (566), Expect = 2.922e-57 Identity = 118/241 (48.96%), Postives = 159/241 (65.98%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXK 724 QD+A+LT G +I+EE+GM+LEK L+ LG K++ I+KD+T I+DG GD+ I+ R QIR IE STSDYDKEKLQER+AKL+GGVAV+K+G A+E E+ EKK RV DAL+AT+AAVEEGIV GGGV N +Q +G+++ A++ P+ I ++ + GY+A +Y DM+ GI+DP KV R+AL AASV+ LM TTE +V ELPK+ K Sbjct: 290 QDIAILTAGTVISEEIGMELEKATLEDLGQAKRIVINKDNTTIIDGIGDEAQIQGRVAQIRQQIEESTSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVAGGGVALIRAAGRVVGLQGENEEQNVGIKLALRAMEAPLRQI-VANAGEEASVIASAVKNGEGNFGYNAGTEQYGDMIAMGILDPTKVTRSALQFAASVAGLMITTECMVTELPKDDK 529
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH601_ANADE (60 kDa chaperonin 1 OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=groL1 PE=3 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 2.922e-57 Identity = 121/243 (49.79%), Postives = 158/243 (65.02%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEA 730 +D+A LTGG ++ EELG+ LE++ L LG K++T+ KD+T I+DG G K IE R + IR IE STS+YD+EKLQERLAKL GGVAV+ +G A+E E+ EKK RV DAL+AT+AAVEEGIVPGGGV DQ+ GVQI+ AL+ P I K+LE G++AA + D+ K+G+IDP KV RTAL +AASV+SL+ TTEA+V + PK+ A Sbjct: 290 KDIATLTGGTVVAEELGIKLEQLGLKDLGRAKRITVDKDNTTIVDGEGKKADIEARIKVIRGQIEESTSEYDREKLQERLAKLVGGVAVINVGAATETEMKEKKARVEDALHATRAAVEEGIVPGGGVAYLRSLADLQKLDVGQGDQRFGVQIVVKALEWPARRIAENAGWDGPVVVNKILEGKGA-FGFNAATDTFEDLTKAGVIDPTKVSRTALQNAASVASLLLTTEAMVADKPKKKAAA 531
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_SERP5 (60 kDa chaperonin OS=Serratia proteamaculans (strain 568) GN=groL PE=3 SV=1) HSP 1 Score: 222.246 bits (565), Expect = 3.817e-57 Identity = 116/238 (48.74%), Postives = 161/238 (67.65%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPK 715 QD+A LTGG +I+EE+G++LEK L+ LGT K++ I+KD T+I+DG G++ +I+ R QIR IE +TSDYD+EKLQER+AKL+GGVAV+K+G A+E E+ EKK RV DAL+AT+AAVEEG+V GGGV N DQ +G+++ A+++P+ I ++ + GY+AA EY DM+ GI+DP KV R+AL AASV+ LM TTE +V +LPK Sbjct: 290 QDIATLTGGTVISEEIGLELEKTTLEDLGTAKRIVINKDTTIIIDGNGEEPAIQGRVSQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRAASKLSELRGVNEDQNVGIKVALRAMESPLRQI-VLNCGEEPSVVANTVKAGEGNYGYNAATEEYGDMIAMGILDPTKVTRSALQYAASVAGLMITTECMVTDLPK 526
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_ORITS (60 kDa chaperonin OS=Orientia tsutsugamushi GN=groL PE=3 SV=1) HSP 1 Score: 222.246 bits (565), Expect = 3.817e-57 Identity = 118/239 (49.37%), Postives = 161/239 (67.36%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVN-LDMLGTCKKVTISKDDTVILDGAGD---KKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVE 706 +D+A+LT G++ITE+LG+ LEKVN LGT +V ++KD T I+ + +K + RCEQIR AI+++TSDY+KEKLQERLAKL GVAVLK+GGA+E E E+KDRV DAL+AT+AAVEEGIVPGGGV N DQ++G+ II+ L+ PV I +L + + + G+DA +YVDM+K+GI+DP KV+RTAL DA SV+SL+ T A++ + Sbjct: 289 EDIAILTNGEVITEQLGIKLEKVNDTSKLGTANRVIVTKDHTTIVHDKNNSDIEKKVNSRCEQIREAIKDTTSDYEKEKLQERLAKLRNGVAVLKVGGATEVEQKERKDRVEDALHATRAAVEEGIVPGGGVALFYASRVLDSLKFDNEDQRVGINIIKKVLEAPVRQIVKNAGGKEDVVVNELSKSTDKNRGFDARTMQYVDMIKAGIVDPTKVVRTALQDAFSVASLVIATSAMITD 527 The following BLAST results are available for this feature:
BLAST of DC900313 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900313 ID=DC900313; Name=DC900313; organism=Citrus sinensis; type=EST; length=1041bpback to top |