DC900313
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_SERRU (60 kDa chaperonin (Fragment) OS=Serratia rubidaea GN=groL PE=3 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 8.502e-57 Identity = 118/241 (48.96%), Postives = 159/241 (65.98%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXK 724 QD+A LT G +I+EE+GM+LEK L+ LG K+V I+KD T+I+DG GD+ +I+ R QIR IE +TSDYD+EKLQER+AKL+GGVAV+K+G A+E E+ EKK RV DAL+AT+AAVEEG+V GGGV N DQ +G+++ A++ P+ I + + + GY+A EY DM+ GI+DP KV R+AL AASV+ LM TTE +V +LPKE K Sbjct: 290 QDIATLTAGTVISEEIGMELEKATLEDLGQAKRVVINKDTTIIIDGIGDEATIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVASKIAELKGDNEDQNVGIKVALRAMEAPLRQIVINAGEEASVIANSVKAGEGS-YGYNAYSEEYGDMIGMGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKEDK 529
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_PSEA7 (60 kDa chaperonin OS=Pseudomonas aeruginosa (strain PA7) GN=groL PE=3 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 8.502e-57 Identity = 116/239 (48.54%), Postives = 163/239 (68.20%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKE 718 QD+A+LTGG +I+EE+G+ LE L+ LG K+V I+K++T I+DGAG + IE R QIR IE +TSDYD+EKLQERLAKL+GGVAV+K+G A+E E+ EKK RV DAL+AT+AAVEEG+VPGGGV N +Q +G+ +++ A++ P+ I K ++Q + + G++AA G Y DM++ GI+DP KV R+AL AAS+ LM TTEA+V E+ ++ Sbjct: 290 QDIAILTGGTVISEEVGLSLEGATLEHLGNAKRVVINKENTTIIDGAGVQADIEARVLQIRKQIEETTSDYDREKLQERLAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALVRALQAIEGLKGDNEEQNVGIALLRRAVEAPLRQIVANAGDEPSVVVDK-VKQGSGNYGFNAATGVYGDMIEMGILDPAKVTRSALQAAASIGGLMITTEAMVAEIVED 527
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_LACS1 (60 kDa chaperonin OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=groL PE=3 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 8.502e-57 Identity = 117/238 (49.16%), Postives = 162/238 (68.07%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPK 715 QD+A LTG +IT++LG+ L+ ++ LG+ KVT++K++T I++GAGDK I ER EQI+ I +TSD+D+EKLQERLAKLSGGVAV+K+G A+E E+ E+K R+ DALNAT+AAVEEG VPGGG D + G+ I++ AL+ PV I KL EQ +G++AA E+VDMV++GI+DP KV R+AL +AASVS+L+ TTEA+V + P+ Sbjct: 288 QDIATLTGATVITDDLGLQLKDTTVEQLGSAGKVTVTKENTTIVEGAGDKDKIAERVEQIKKQISETTSDFDREKLQERLAKLSGGVAVIKVGAATETELKERKYRIEDALNATRAAVEEGFVPGGGTALVNVIGKVAALEEEG-DVQTGINIVKRALEEPVRQIAENAGLEGSVIVEKLKEQ-KPGVGFNAATNEWVDMVEAGIVDPTKVTRSALQNAASVSALLLTTEAVVADKPE 523
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_HAES2 (60 kDa chaperonin OS=Haemophilus somnus (strain 2336) GN=groL PE=3 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 8.502e-57 Identity = 119/242 (49.17%), Postives = 160/242 (66.12%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTA-NFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXK 724 QD+A+LT G +I+EE+GM+LEK L+ LG K+V I+KD+T I+DG GD+ I+ R QIR IE +TSDYDKEKLQER+AKL+GGVAV+K+G A+E E+ EKKDRV DAL+AT+AAVEEGIV GGGV N DQ +G+++ A++ P+ I ++ + GY+A +Y DM+ GI+DP KV R+AL AAS++ LM TTE +V +LPKE K Sbjct: 290 QDIAILTAGTVISEEIGMELEKATLEDLGQAKRVVINKDNTTIIDGIGDEAQIKGRVAQIRQQIEEATSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALIRAATKVATTLKGDNEDQDVGIKLALRAMEAPLRQI-VTNAGEEASVVASAVKNGEGNFGYNAGTEQYGDMIAMGILDPTKVTRSALQFAASIAGLMVTTECMVADLPKEEK 530
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_HAES1 (60 kDa chaperonin OS=Haemophilus somnus (strain 129Pt) GN=groL PE=3 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 8.502e-57 Identity = 119/242 (49.17%), Postives = 160/242 (66.12%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTA-NFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXK 724 QD+A+LT G +I+EE+GM+LEK L+ LG K+V I+KD+T I+DG GD+ I+ R QIR IE +TSDYDKEKLQER+AKL+GGVAV+K+G A+E E+ EKKDRV DAL+AT+AAVEEGIV GGGV N DQ +G+++ A++ P+ I ++ + GY+A +Y DM+ GI+DP KV R+AL AAS++ LM TTE +V +LPKE K Sbjct: 290 QDIAILTAGTVISEEIGMELEKATLEDLGQAKRVVINKDNTTIIDGIGDEAQIKGRVAQIRQQIEEATSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALIRAATKVATTLKGDNEDQDVGIKLALRAMEAPLRQI-VTNAGEEASVVASAVKNGEGNFGYNAGTEQYGDMIAMGILDPTKVTRSALQFAASIAGLMVTTECMVADLPKEEK 530
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_FERNB (60 kDa chaperonin OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=groL PE=3 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 8.502e-57 Identity = 114/244 (46.72%), Postives = 164/244 (67.21%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGV-XXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEA 730 QD+A+LTGG + +EE+G++LE + L LG V + KD+T+I+ G G + I++R QI++ IE +TS+Y+KE LQER+AKL+GGVAV+K+G A+E E+ EKK R+ DAL+AT+AAVEEGIVPGGG+ + D+K+G QI+ NAL+ P+ I +L +D+ G+DA KGEY +M + GIIDP KV R+AL +AAS++ ++ TTE +VVE P+E K A Sbjct: 288 QDIAILTGGIVASEEVGINLEDLTLQDLGRADVVRVKKDETIIVGGKGKPEEIKKRVAQIKAQIEQTTSEYEKETLQERMAKLAGGVAVIKVGAATETELKEKKHRIEDALSATRAAVEEGIVPGGGITLLRARKVLEPVLNELTGDEKLGAQIVYNALEAPIRQIALNAGYDGAIIIHNVLSKDDVAYGFDALKGEYCNMYERGIIDPAKVTRSALQNAASIAGMLLTTEVLVVEKPEEKKPA 531
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_CLOBO (60 kDa chaperonin OS=Clostridium botulinum GN=groL PE=3 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 8.502e-57 Identity = 113/239 (47.28%), Postives = 165/239 (69.04%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKE 718 +D+A+LTGG++I+EELG +++ V LDMLGT + + ++K++T I++G G K IE+R QI+ IE +TS++DKEKLQERLAK++GGVAV+K+G A+E E+ E+K R+ DAL ATKAAVEEGIV GGG + N + ++G+ II+ AL+ PV I K++ +G+DA +GEYV+MV+ GI+DP KV R+AL +AASV+S TTE +V E+P++ Sbjct: 288 RDIAILTGGEVISEELGREIKDVTLDMLGTAESIKVTKENTTIVNGKGSKAEIEDRIGQIKRQIEETTSEFDKEKLQERLAKIAGGVAVVKVGAATETELKERKLRIEDALAATKAAVEEGIVAGGGTAYLRAIKEVEKLTDNNSEIRLGIAIIRRALEEPVRQIASNAGLEGSVIIDKIM-NGQEGMGFDALEGEYVNMVQKGIVDPAKVTRSALQNAASVASTFLTTECVVAEIPEK 525
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_BRECH (60 kDa chaperonin OS=Brevibacillus choshinensis GN=groL PE=3 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 8.502e-57 Identity = 113/241 (46.89%), Postives = 167/241 (69.29%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXK 724 QD+A LTGG++ITEELG+DL+ L+ LG K+ ++K++T +++GAGDK +IE R QIR IE++TSD+D+EKLQERLAKL+GGVAV+K+G A+E E+ EKK R+ DALN+T+AAVEEGIVPGGG ++ +GV I+ +L+ PV I + L+++ +G++AA EYV+M+++GI+D KV R+AL +AASV+++ TTEA++ + P+E K Sbjct: 288 QDIAALTGGEVITEELGLDLKSTKLEQLGRAGKIVVTKENTTVVEGAGDKANIESRVAQIRQQIEDTTSDFDREKLQERLAKLAGGVAVIKVGAATETELKEKKLRIEDALNSTRAAVEEGIVPGGGTTLINAIKAVEGVKVEG-EEAVGVHIVLRSLEEPVRQIAANAGLEGSVIVER-LKKEPVGIGFNAATEEYVNMLEAGIVDAAKVTRSALSNAASVAAMFLTTEAVIADKPEENK 526
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_BACTN (60 kDa chaperonin OS=Bacteroides thetaiotaomicron GN=groL PE=3 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 8.502e-57 Identity = 116/244 (47.54%), Postives = 162/244 (66.39%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEAP 733 +D+A+LTGG +I+EE G+ LE+ ++MLGT KVT+SKD T I++GAG K++I+ERC+QI++ I + SDYD+EKLQERLAKLSGGVAVL +G ASE E+ EKKDRV DAL AT+AA+EEGI+PGGGV N D+ G+ II+ A++ P+ I K+ E D GY+A Y ++ +G++DP KV R AL +AAS++ + TTE ++VE ++ E P Sbjct: 290 EDIAILTGGVVISEEKGLKLEQATIEMLGTADKVTVSKDYTTIVNGAGVKENIKERCDQIKAQIVATKSDYDREKLQERLAKLSGGVAVLYVGAASEVEMKEKKDRVDDALRATRAAIEEGIIPGGGVAYIRAIDSLEGMKGDNADETTGIGIIKRAIEEPLREIVANAGKEGAVVVQKVRE-GKGDFGYNARTDVYENLHAAGVVDPAKVARVALENAASIAGMFLTTECVIVEKKEDKPEMP 532
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_HELP2 (60 kDa chaperonin OS=Helicobacter pylori (strain P12) GN=groL PE=3 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 1.110e-56 Identity = 123/244 (50.41%), Postives = 162/244 (66.39%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEAP 733 +D+A+LTGG +I+EELG+ LE ++ LG ++ I KD+T I+DG G +++R QI++ I ++TSDYDKEKLQERLAKLSGGVAV+K+G ASE E+ EKKDRV DAL+ATKAAVEEGIV GGG + D+K+G +II A+K P+ I + +E+ G++A+ G+YVDM K GIIDPLKV R AL +A SVSSL+ TTEA V E+ KE K P Sbjct: 289 KDIAILTGGQVISEELGLSLENAEVEFLGKAGRIVIDKDNTTIVDGKGHSDDVKDRVVQIKTQIASTTSDYDKEKLQERLAKLSGGVAVIKVGAASEVEMKEKKDRVDDALSATKAAVEEGIVIGGGAALIRAAQKVHL--NLHDDEKVGYEIIMRAIKAPLAQIAINAGYDGGVVVNE-VEKHEGHFGFNASNGKYVDMFKEGIIDPLKVERIALQNAVSVSSLLLTTEATVHEI-KEEKATP 528 The following BLAST results are available for this feature:
BLAST of DC900313 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DC900313 ID=DC900313; Name=DC900313; organism=Citrus sinensis; type=EST; length=1041bpback to top |