DC900313
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_HAMD5 (60 kDa chaperonin OS=Hamiltonella defensa subsp. Acyrthosiphon pisum (strain 5AT) GN=groL PE=3 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 1.110e-56 Identity = 122/244 (50.00%), Postives = 159/244 (65.16%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTA--NFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLE-QDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXK 724 QD+AVLT G +I+EE G LEK + LG K+V I+KD T I+DGAG+K IE R + IR IEN+TSDYDKEKLQER+AKLSGGVAV+K+G +E + EKK RV DAL AT+AAVEEG+VPGGGV S N DQ +G+++ A+++P+ I K+ E + N + GY+A Y DM++ GI+DP KV R+AL AAS++ LM TTE +V +LPKE K Sbjct: 290 QDIAVLTHGHVISEETGDSLEKATQENLGKAKRVVITKDATTIIDGAGEKSRIEARVQNIRKQIENATSDYDKEKLQERVAKLSGGVAVIKVGAPTEIAMKEKKARVEDALQATRAAVEEGVVPGGGVALIRVASKIANSSLKGDNEDQNVGIRVALRAMESPLRQIVVNAGEEASVIANKVKENKGNDNYGYNAQTEAYGDMIEMGILDPTKVTRSALQYAASIAGLMITTECMVTDLPKEEK 533
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_HAEIN (60 kDa chaperonin OS=Haemophilus influenzae GN=groL PE=3 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 1.110e-56 Identity = 119/242 (49.17%), Postives = 161/242 (66.53%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTA-NFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXK 724 QD+A+LT G +I+EE+GM+LEK L+ LG K+V I+KD+T I+DG GD+ I+ R QIR IE STSDYDKEKLQER+AKL+GGVAV+K+G A+E E+ EKKDRV DAL+AT+AAVEEGIV GGGV N +Q +G+++ A++ P+ I ++ + GY+A +Y DM++ GI+DP KV R+AL AASV+ LM TTE +V +LPK+ K Sbjct: 290 QDIAILTAGTVISEEIGMELEKATLEDLGQAKRVVINKDNTTIIDGIGDEAQIKGRVAQIRQQIEESTSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALVRAAAKVAASLKGDNEEQNVGIKLALRAMEAPLRQI-VTNAGEEASVVASAVKNGEGNFGYNAGTEQYGDMIEMGILDPTKVTRSALQFAASVAGLMITTECMVTDLPKDDK 530
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_HAEIG (60 kDa chaperonin OS=Haemophilus influenzae (strain PittGG) GN=groL PE=3 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 1.110e-56 Identity = 119/242 (49.17%), Postives = 161/242 (66.53%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTA-NFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXK 724 QD+A+LT G +I+EE+GM+LEK L+ LG K+V I+KD+T I+DG GD+ I+ R QIR IE STSDYDKEKLQER+AKL+GGVAV+K+G A+E E+ EKKDRV DAL+AT+AAVEEGIV GGGV N +Q +G+++ A++ P+ I ++ + GY+A +Y DM++ GI+DP KV R+AL AASV+ LM TTE +V +LPK+ K Sbjct: 290 QDIAILTAGTVISEEIGMELEKATLEDLGQAKRVVINKDNTTIIDGIGDEAQIKGRVAQIRQQIEESTSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALVRAAAKVAASLKGDNEEQNVGIKLALRAMEAPLRQI-VTNAGEEASVVASAVKNGEGNFGYNAGTEQYGDMIEMGILDPTKVTRSALQFAASVAGLMITTECMVTDLPKDDK 530
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_HAEIE (60 kDa chaperonin OS=Haemophilus influenzae (strain PittEE) GN=groL PE=3 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 1.110e-56 Identity = 119/242 (49.17%), Postives = 161/242 (66.53%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTA-NFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXK 724 QD+A+LT G +I+EE+GM+LEK L+ LG K+V I+KD+T I+DG GD+ I+ R QIR IE STSDYDKEKLQER+AKL+GGVAV+K+G A+E E+ EKKDRV DAL+AT+AAVEEGIV GGGV N +Q +G+++ A++ P+ I ++ + GY+A +Y DM++ GI+DP KV R+AL AASV+ LM TTE +V +LPK+ K Sbjct: 290 QDIAILTAGTVISEEIGMELEKATLEDLGQAKRVVINKDNTTIIDGIGDEAQIKGRVAQIRQQIEESTSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALVRAAAKVAASLKGDNEEQNVGIKLALRAMEAPLRQI-VTNAGEEASVVASAVKNGEGNFGYNAGTEQYGDMIEMGILDPTKVTRSALQFAASVAGLMITTECMVTDLPKDDK 530
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_HAEI8 (60 kDa chaperonin OS=Haemophilus influenzae (strain 86-028NP) GN=groL PE=3 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 1.110e-56 Identity = 119/242 (49.17%), Postives = 161/242 (66.53%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTA-NFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXK 724 QD+A+LT G +I+EE+GM+LEK L+ LG K+V I+KD+T I+DG GD+ I+ R QIR IE STSDYDKEKLQER+AKL+GGVAV+K+G A+E E+ EKKDRV DAL+AT+AAVEEGIV GGGV N +Q +G+++ A++ P+ I ++ + GY+A +Y DM++ GI+DP KV R+AL AASV+ LM TTE +V +LPK+ K Sbjct: 290 QDIAILTAGTVISEEIGMELEKATLEDLGQAKRVVINKDNTTIIDGIGDEAQIKGRVAQIRQQIEESTSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALVRAAAKVAASLKGDNEEQNVGIKLALRAMEAPLRQI-VTNSGEEASVVASAVKNGEGNFGYNAGTEQYGDMIEMGILDPTKVTRSALQFAASVAGLMITTECMVTDLPKDDK 530
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_BUCBP (60 kDa chaperonin OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=groL PE=3 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 1.110e-56 Identity = 118/241 (48.96%), Postives = 158/241 (65.56%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXK 724 QD+++LT G +I+EEL M+LEK L+ LG K+V I+KD T I+ G G+K +I+ R QIR I+ +TSDYDKEKL ERLAKLSGGVAVLK+G A+E E+ EKK RV DAL+AT+AAVEEG+VPGGGV N DQ +G+++ A++ P+ I ++ + GY+AA EY DM+ GI+DP KV R+AL A+SV+ LM TTE +V +LPK+ K Sbjct: 290 QDISILTSGSVISEELAMELEKSTLEDLGQAKRVVINKDTTTIIGGIGEKYNIQSRISQIRQQIQEATSDYDKEKLNERLAKLSGGVAVLKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALVRVAAKISNIVGQNEDQNVGIRVALRAMEAPLRQIVSNSGEEPSVVTNN-VKDGKGNYGYNAATDEYGDMISFGILDPTKVTRSALQYASSVAGLMITTECMVTDLPKDEK 529
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_ACIAC (60 kDa chaperonin OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=groL PE=3 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 1.110e-56 Identity = 120/244 (49.18%), Postives = 161/244 (65.98%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEAP 733 +D+A+LTGG +I EE+G+ LEKV L LG K++ + K++T I+DGAG IE R +QIR IE +TSDYD+EKLQER+AKL+GGVAV+K+G A+E E+ EKK RV DAL+AT+AAVEEGIV GGGV N DQ G+++I A++ P+ I +L + G++AA Y DM++ GI+DP KV RTAL +AASV+SL+ TTEA+V E PK+ AP Sbjct: 290 EDIAILTGGKVIAEEVGLTLEKVTLADLGQAKRIEVGKENTTIIDGAGAAADIEARVKQIRIQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVAGGGVALLRAKQAAGDIKGDNPDQDAGIKLILKAIEAPLREIVANAGGEPSVVVNAVL-NGKGNYGFNAANDTYGDMLEMGILDPTKVTRTALQNAASVASLLLTTEAMVAEAPKDDAPAP 532
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_WOLRE (60 kDa chaperonin OS=Wolinella recta GN=groL PE=3 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 1.450e-56 Identity = 123/244 (50.41%), Postives = 160/244 (65.57%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEAP 733 +D+A+LTGG++++EELG LE L LG V I KD+T I++GAG+K +I+ R QI++ I +TSDYDKEKLQERLAKLSGGVAV+K+G A+E E+ EKKDRV DAL+ATKAAVEEGIV GGG + D+ IG I++ AL P+ I + + + G++AA GEYVDM K+GIIDP+KV R AL +A SV+SL+ TTEA + EL KE K P Sbjct: 289 EDIAILTGGEVVSEELGRTLESATLSDLGQASSVIIDKDNTTIVNGAGEKSAIDARIIQIKAQIAETTSDYDKEKLQERLAKLSGGVAVIKVGAATETEMKEKKDRVDDALSATKAAVEEGIVIGGGAAFIKAGAKVDLNLSG--DEAIGADIVRRALTAPLRQIAENAGFDAGVVANSVSVSKDDNYGFNAATGEYVDMFKAGIIDPVKVERIALQNAVSVASLLLTTEATISEL-KEDKPMP 529
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_TREPR (60 kDa chaperonin OS=Tremblaya princeps GN=groL PE=3 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 1.450e-56 Identity = 115/244 (47.13%), Postives = 158/244 (64.75%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEAP 733 QD+A+LTGG +++EE G+ LEKV+L LG K+ ++KD T I+DGAGD K+I R + IR IE + SDYDKEKLQER+AKL+GGVAV+++G A+E E+ EKK RV DAL+AT+AAVEEGIVPGGGV N DQ G++I+ A++ P+ I + + GY+AA Y D++ +G++DP KV R+AL +AASV+ LM TT+ V + PK + AP Sbjct: 290 QDIAILTGGHVVSEETGLSLEKVSLPELGQAKRAEVAKDTTTIIDGAGDAKAINARIKHIRLQIEEAASDYDKEKLQERVAKLAGGVAVIRVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVALIRARNAISNLRCDNPDQDAGIRIVLRAMEEPLRQIVANGGEEASVVASSVASGKSISYGYNAAMRVYGDLMDAGVVDPTKVTRSALQNAASVAGLMLTTDVAVCDSPKREEAAP 533
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_SHELP (60 kDa chaperonin OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=groL PE=3 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 1.450e-56 Identity = 117/239 (48.95%), Postives = 160/239 (66.95%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKE 718 QD+A+LTGG +I EE+G++LEK L+ LGT K+V I+KDDT I+DG G+++ I R QI+ E STSDYD+EKLQER+AKL+GGVAV+K+G A+E E+ EKK RV DAL+AT+AAVEEG+V GGGV AN DQK GV I A++ P+ I ++ + + GY+A Y DM++ GI+DP KV R+AL A+S++ LM TTEA+V ++P+E Sbjct: 290 QDIAILTGGTVIAEEIGLELEKATLEDLGTAKRVVITKDDTTIIDGTGEQEQISARVAQIKIQAEESTSDYDREKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVASKIGELDVANEDQKHGVTIALRAMEAPLRQIATNAGEEASVVANN-VKNGSGNYGYNAGSDVYGDMLEMGILDPTKVTRSALQFASSIAGLMITTEAMVGDVPQE 527 The following BLAST results are available for this feature:
BLAST of DC900313 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DC900313 ID=DC900313; Name=DC900313; organism=Citrus sinensis; type=EST; length=1041bpback to top |