DC900303
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: NIP12_ORYSJ (Aquaporin NIP1-2 OS=Oryza sativa subsp. japonica GN=NIP1-2 PE=2 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 7.461e-11 Identity = 51/180 (28.33%), Postives = 80/180 (44.44%), Query Frame = 2 Query: 2 IFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGA-------NTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAA 520 + VLVY + ISG H NPAVT + + +Y+VAQ LG+ + ++ + GGGA T +G + A E + +F L++ V R+ + LA L +G V + L P+TG +NPARS G A++ + W++ P G + A Sbjct: 107 VMVLVYTVSHISGAHFNPAVTVAFATCGRFRWKQVPSYVVAQVLGST----MASLTLRVVFGGGGGGARGEHLFFGTTPAG-SMAQAAALEFVISFFLMFVVSGVATDNRA-----IGELAGLAVGATVAVNVLFAGPVTGASMNPARSLGPAMVAGR---YGGVWVYVAAPVSGTVCGA 273
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: GLPF_PSEAE (Glycerol uptake facilitator protein OS=Pseudomonas aeruginosa GN=glpF PE=3 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 7.461e-11 Identity = 48/161 (29.81%), Postives = 76/161 (47.20%), Query Frame = 2 Query: 2 IFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLV-----KAFMKHEY--NSLGGGANTVA----------SGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFG 433 + + +Y +AG+SG H+NPAV+ L+L + Y+ AQ GA C LV F++ E N + G +++A + G A E++ T +L+ + + TD LAPL IG + ++ A P+TG +NPAR FG Sbjct: 55 VSMAIYLSAGVSGAHLNPAVSIALWLFAGFEGRKLPFYITAQVAGAFCAAALVYTLYSSLFIEFEQAQNIVRGSQDSLALASVFSTYPHPALSVGQAFLVEVVITAILMAVIMALTDDGNGLPRGP---LAPLLIGLLIAVIGSAMGPLTGFAMNPARDFG 212
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: GLPF_BACSU (Glycerol uptake facilitator protein OS=Bacillus subtilis GN=glpF PE=2 SV=2) HSP 1 Score: 67.0106 bits (162), Expect = 9.744e-11 Identity = 49/189 (25.93%), Postives = 78/189 (41.27%), Query Frame = 2 Query: 2 IFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLG------GGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIY-------NNDKAWDDHWIFWVGPFVGALAAAAYH 529 + + Y GISG H+NPA+T L Y+ AQ +GAI G ++ + S G +T S + + + +E+IGTFVLV + + + L PL +GF + + ++ TG INPAR G + + W W+ VGP +G ++ Sbjct: 48 VAMAAYAVGGISGAHLNPALTIALAFVGDFPWKEVPVYIAAQMIGAIIGAVIIYLHYLPHWKSTDDPAAKLGVFSTGPSIPHTFANVLSEVIGTFVLVLGILAI------GANQFTEGLNPLIVGFLIVAIGISLGGTTGYAINPARDLGPRIAHAFLPIPGKGSSNWKYAWVPVVGPILGGSFGGVFY 230 The following BLAST results are available for this feature:
BLAST of DC900303 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 193
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900303 ID=DC900303; Name=DC900303; organism=Citrus sinensis; type=EST; length=658bpback to top |