DC900303

Overview
NameDC900303
Unique NameDC900303
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length658
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9730 contig Csv1_Contig9730:368..1036. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: TIP32_ARATH (Probable aquaporin TIP3-2 OS=Arabidopsis thaliana GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.088e-29
Identity = 75/181 (41.44%), Postives = 104/181 (57.46%), Query Frame = 2
Query:    2 IFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 541
            +F  V     +SGGH+NPAVTF   +  ++S+IRA+ Y VAQ +GAI    L    ++   N L      VASG ++   L  EII TF LVY V+S A DPKR +    + ++APL IG  V    L   P  G  +NPAR+FG A++      W +HWI+WVGPF+G   AA  ++Y++
Sbjct:   77 LFAAVSAAINVSGGHVNPAVTFAALIGGRISVIRAIYYWVAQLIGAI----LACLLLRLATNGLRPVGFHVASGVSELHGLLMEIILTFALVYVVYSTAIDPKRGS----IGIIAPLAIGLIVGANILVGGPFDGASMNPARAFGPALV---GWRWSNHWIYWVGPFIGGALAALIYEYMI 246          
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: AQP5_SHEEP (Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 3.562e-29
Identity = 74/171 (43.27%), Postives = 103/171 (60.23%), Query Frame = 2
Query:   32 ISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAP-LPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 541
            +SGGH+NPA+T  L +  ++SL+RAV Y+VAQ +GAI G  ++     +   S     N + +    G A+ AE+I TF L   VFS+TD +R++     PV +P L IG +V + HL  I  TG  +NPARSFG AVI +   +   HW+FWVGP VGA  AA  + Y+L
Sbjct:   63 VSGGHMNPAITLALLVGNQISLLRAVFYLVAQLVGAIAGAAILYGLAPYNARS-NLAVNALNNNTTAGQAVVAEMILTFQLALCVFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVIMSRFSS--AHWVFWVGPIVGAATAAIIYFYLL 225          
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: TIP31_ARATH (Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 6.075e-29
Identity = 74/181 (40.88%), Postives = 104/181 (57.46%), Query Frame = 2
Query:    2 IFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSA-TDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 541
            +F  V     +SGGH+NPAVTFG  +  +V+ IRA+ Y +AQ LGAI    L    ++   N +      +ASG    + L  EII TF LVY V+S   DPKR +    + ++APL IG  V    L   P +G  +NPAR+FG A++      W DHWI+WVGPF+G+  AA  ++Y++
Sbjct:   77 LFAAVSAAINVSGGHVNPAVTFGALVGGRVTAIRAIYYWIAQLLGAI----LACLLLRLTTNGMRPVGFRLASGVGAVNGLVLEIILTFGLVYVVYSTLIDPKRGS----LGIIAPLAIGLIVGANILVGGPFSGASMNPARAFGPALV---GWRWHDHWIYWVGPFIGSALAALIYEYMV 246          
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: AQP_ANOGA (Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP008842 PE=3 SV=4)

HSP 1 Score: 127.487 bits (319), Expect = 6.075e-29
Identity = 70/172 (40.70%), Postives = 100/172 (58.14%), Query Frame = 2
Query:   32 ISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGG-GANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILR 544
            +SG HINPAVT GL +   VS+++   Y+V+QC+GAI G  ++KA    E   +GG G   +A G + G  +  E + TF+LV+ V    D +R    + V   APL IG ++   HLA I  TG  +NPARSFG AV+  N   + D W++WVGP VG + A A ++   +
Sbjct:   75 VSGCHINPAVTIGLIVTADVSILKGAFYIVSQCIGAIAGAAVIKAATPSEV--VGGLGVTGIAPGLSTGQGVLIEALITFMLVFVVHGVCDNRR----TDVKGSAPLAIGLSITAGHLAAIKYTGASMNPARSFGPAVVMGN---YTDLWVYWVGPIVGGIVAGAVYRLFFK 237          
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: TIP12_MAIZE (Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.036e-28
Identity = 76/183 (41.53%), Postives = 108/183 (59.02%), Query Frame = 2
Query:    2 IFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGG---GANTVASGYNKGSALGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYI 538
            +FV V   A ISGGH+NPAVTFG F+   +SL++A+ Y VAQ LG++    L+K        + GG   GA ++++G    +A+  E++ TF LVYTV+ +A DPK+      + V+AP+ IGF V    LA     G  +NPA SFG AV+      W++HW++WVGP  GA  AA  +  I
Sbjct:   69 LFVAVSVGANISGGHVNPAVTFGAFVGGNISLLKALVYWVAQLLGSVVACLLLKI-------ATGGAALGAFSLSAGVGAMNAVVLEMVMTFGLVYTVYATAVDPKK----GDLGVIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVTG---VWENHWVYWVGPLAGAAIAALVYDII 237          
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: AQP_AEDAE (Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 PE=2 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 1.036e-28
Identity = 67/172 (38.95%), Postives = 97/172 (56.40%), Query Frame = 2
Query:   32 ISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGG-GANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILR 544
            +SG HINPAVT GL +   +S+++   Y+V+QC+GAI G  L+KA    +   +GG G   +      G  +  E + TF+LV+ V    D +R    S +   APL IG ++   HL+ I  TG  +NPARSFG AV+  N   W D W++WVGP VG + A A ++   +
Sbjct:   76 VSGCHINPAVTIGLMITADISILKGAFYIVSQCVGAIAGAALIKAATPSDV--IGGLGVTGIDPRLTAGQGVMIEALITFILVFVVHGVCDNRR----SDIKGSAPLAIGLSITAGHLSAIKYTGASMNPARSFGPAVVMGN---WTDQWVYWVGPIVGGILAGAVYRLFFK 238          
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: AQP_CICVR (Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.353e-28
Identity = 68/182 (37.36%), Postives = 100/182 (54.95%), Query Frame = 2
Query:    2 IFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRA 547
            I  +V C   +SG HINPAVT GL +   +S+++A+ Y++ QC+GAI G  ++K     E+        ++A G         E   TFVL+  V S  D +R     ++   AP+ +G A+   HLA I  TG+ +NPARSFG AV  N D  W +HW++W GP VG + A   ++ + RA
Sbjct:   69 IATMVQCIGHVSGCHINPAVTCGLLVTGHISILKAIFYIIVQCVGAIAGSAILKVITPAEFRGT-LCMTSLAPGVTPPMGFLVEACITFVLILLVQSVCDDRR----KNLGNAAPVAVGLAITCCHLAAIKYTGSSMNPARSFGPAV--NGDDNWANHWVYWAGPIVGGVVAGITYRALFRA 243          
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: AQP5_HUMAN (Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.353e-28
Identity = 74/182 (40.66%), Postives = 107/182 (58.79%), Query Frame = 2
Query:    2 IFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGG-GANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAP-LPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 541
            I  L      +SGGHINPA+T  L +  ++SL+RA  Y+ AQ +GAI G G++  +     N+ G    N + +   +G A+  E+I TF L   +F++TD +R++     PV +P L IG +V + HL  I  TG  +NPARSFG AV+ N  +    HW+FWVGP VGA+ AA  + Y+L
Sbjct:   53 IGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGIL--YGVAPLNARGNLAVNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMN--RFSPAHWVFWVGPIVGAVLAAILYFYLL 225          
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: TIP13_ARATH (Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3 PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.309e-28
Identity = 75/183 (40.98%), Postives = 105/183 (57.38%), Query Frame = 2
Query:    2 IFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGG---GANTVASGYNKGSALGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYI 538
            +FV V   A +SGGH+NPAVTFG F+   ++L+RA+ Y +AQ LGA+    L+K        S GG    A +++ G    +A+  EI+ TF LVYTV+ +A DPK+      + ++APL IG  V    L      G  +NPA SFG AV+      W +HW++WVGPF+GA  AA  +  I
Sbjct:   69 LFVAVSVGANVSGGHVNPAVTFGAFIGGNITLLRAILYWIAQLLGAVVACLLLKV-------STGGMETAAFSLSYGVTPWNAVVFEIVMTFGLVYTVYATAVDPKK----GDIGIIAPLAIGLIVGANILVGGAFDGASMNPAVSFGPAVV---SWIWTNHWVYWVGPFIGAAIAAIVYDTI 237          
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: TIP1_MEDTR (Probable aquaporin TIP-type OS=Medicago truncatula GN=AQP1 PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 6.717e-28
Identity = 69/180 (38.33%), Postives = 102/180 (56.67%), Query Frame = 2
Query:    2 IFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYI 538
            +FV V   A ISGGH+NPAVTFG F+   ++L+R + Y++AQ LG+I    L+         + G     ++ G   G AL  EI+ TF LVYTV+ +A DPK+     ++ ++AP+ IGF V    L     TG  +NPA SFG AV+     +W +HW++W GP +G   A   ++ +
Sbjct:   69 LFVAVSVGANISGGHVNPAVTFGAFVGGNITLLRGIVYIIAQLLGSIVASALLVFVTASSVPAFG-----LSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKK----GNIGIIAPIAIGFIVGANILVGGAFTGASMNPAVSFGPAVV---SWSWSNHWVYWAGPLIGGGIAGLVYEVL 236          
The following BLAST results are available for this feature:
BLAST of DC900303 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 193
Match NameE-valueIdentityDescription
TIP32_ARATH2.088e-2941.44Probable aquaporin TIP3-2 OS=Arabidopsis thaliana ... [more]
AQP5_SHEEP3.562e-2943.27Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1[more]
TIP31_ARATH6.075e-2940.88Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1... [more]
AQP_ANOGA6.075e-2940.70Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP0088... [more]
TIP12_MAIZE1.036e-2841.53Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1[more]
AQP_AEDAE1.036e-2838.95Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 P... [more]
AQP_CICVR1.353e-2837.36Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 ... [more]
AQP5_HUMAN1.353e-2840.66Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1[more]
TIP13_ARATH2.309e-2840.98Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3... [more]
TIP1_MEDTR6.717e-2838.33Probable aquaporin TIP-type OS=Medicago truncatula... [more]

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Properties
Property NameValue
Genbank descriptionDC900303 VSS Citrus sinensis cDNA clone VS28652 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900303 ID=DC900303; Name=DC900303; organism=Citrus sinensis; type=EST; length=658bp
GATCTTCGTCCTTGTTTACTGCACCGCTGGCATTTCTGGTGGTCACATTA
ACCCTGCTGTGACGTTTGGGCTGTTCTTGGCAAGGAAGGTATCATTGATC
AGGGCTGTGGCTTACATGGTGGCTCAGTGCTTGGGTGCCATTTGCGGTGT
TGGTTTGGTCAAGGCCTTCATGAAGCATGAGTACAACTCACTTGGTGGTG
GTGCTAACACTGTGGCTTCTGGCTACAACAAAGGATCAGCCTTGGGTGCT
GAGATTATTGGTACCTTCGTGCTTGTTTACACAGTCTTCTCGGCCACAGA
CCCCAAGAGAAGCGCTCGTGACTCTCACGTGCCCGTTTTGGCTCCACTTC
CAATTGGATTTGCTGTGTTCATGGTTCACTTGGCCACCATCCCCATCACT
GGAACGGGCATCAACCCTGCTAGGAGCTTTGGTGCTGCTGTTATCTACAA
CAATGACAAGGCCTGGGATGACCATTGGATCTTCTGGGTTGGTCCTTTCG
TTGGAGCATTGGCTGCAGCGGCATACCACCAGTACATCTTGAGGGCTGCT
GCTATCAAGGCTTTGGGATCATTCCGCAGCAACCCTTCAAACTAAGAAAG
CAAATTATGATGAATATGAACCACCAACCAGAATAGCTNTTTCCTTTCTC
TCTTTCTG
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