DC900303
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: TIP2_TOBAC (Probable aquaporin TIP-type RB7-18C OS=Nicotiana tabacum PE=2 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 1.186e-24 Identity = 68/169 (40.24%), Postives = 97/169 (57.40%), Query Frame = 2 Query: 2 IFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVG 505 +FV V A ISGGH+NPAVT GL + ++++ Y +AQ LG+ L +K+ N L + VA+G N + EII TF LVYTV+ +A DPK+ + + +AP+ IGF V LA P +G +NPARSFG AV+ + + +WI+W GP +G Sbjct: 67 LFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLL----LKYVTNGLAVPTHGVAAGLNGFQGVVMEIIITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVAGD---FSQNWIYWAGPLIG 224
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: TIP1_TOBAC (Probable aquaporin TIP-type RB7-5A OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.549e-24 Identity = 68/169 (40.24%), Postives = 97/169 (57.40%), Query Frame = 2 Query: 2 IFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVG 505 +FV V A ISGGH+NPAVT GL + ++++ Y +AQ LG+ L +K+ N L + VA+G N + EII TF LVYTV+ +A DPK+ + + +AP+ IGF V LA P +G +NPARSFG AV+ + + +WI+W GP +G Sbjct: 67 LFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLL----LKYVTNGLAVPTHGVAAGLNGLQGVVMEIIITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVAGD---FSQNWIYWAGPLIG 224
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: AQP2_RAT (Aquaporin-2 OS=Rattus norvegicus GN=Aqp2 PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.549e-24 Identity = 66/184 (35.87%), Postives = 94/184 (51.09%), Query Frame = 2 Query: 2 IFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAA 553 I +LV +SG HINPAVT + VS +RA Y+ AQ LGA+ G ++ E N + + G A+ E+ T LV +F++TD +R L IGF+V + HL I TG +NPARS AV+ +DDHW+FW+GP VGA+ + + Y+L +A Sbjct: 52 IGILVQALGHVSGAHINPAVTVACLVGCHVSFLRAAFYVAAQLLGAVAGAAILHEITPVEIRG-DLAVNALHNNATAGQAVTVELFLTMQLVLCIFASTDERRGDNLGS----PALSIGFSVTLGHLLGIYFTGCSMNPARSLAPAVVTGK---FDDHWVFWIGPLVGAIIGSLLYNYLLFPSA 227
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: TIP32_ORYSJ (Probable aquaporin TIP3-2 OS=Oryza sativa subsp. japonica GN=TIP3-2 PE=2 SV=2) HSP 1 Score: 112.464 bits (280), Expect = 2.022e-24 Identity = 65/173 (37.57%), Postives = 95/173 (54.91%), Query Frame = 2 Query: 35 SGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGAN----TVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 541 SGGH+NPAVTFG+ + R++S RA Y AQ LGA+ V L++ GG T+ ++ AL E++ TF LVYTV++ +RS +APL IG LA P G +NPAR+FG A++ N W HW++W+GP +GA A A +++++ Sbjct: 87 SGGHVNPAVTFGVLVGRRISFARAALYWAAQLLGAVLAVLLLRL--------ASGGMRPMGFTLGHRIHERHALLLEVVMTFGLVYTVYATAVDRRSGGGD----IAPLAIGLVAGANILAGGPFDGAAMNPARAFGPALVGWN---WRHHWVYWLGPLIGAGMAGALYEFVM 244
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: AQP2_MOUSE (Aquaporin-2 OS=Mus musculus GN=Aqp2 PE=2 SV=2) HSP 1 Score: 112.464 bits (280), Expect = 2.022e-24 Identity = 66/180 (36.67%), Postives = 92/180 (51.11%), Query Frame = 2 Query: 2 IFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 541 I LV +SG HINPAVT + VS +RA Y+ AQ LGA+ G ++ E N + + G A+ E+ T LV +F++TD +RS L IGF+V + HL I TG +NPARS AV+ +DDHW+FW+GP VGA+ + + Y+L Sbjct: 52 IGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAAFYVAAQLLGAVAGAAILHEITPVEIRG-DLAVNALHNNATAGQAVTVELFLTMQLVLCIFASTDERRSDNLGS----PALSIGFSVTLGHLLGIYFTGCSMNPARSLAPAVVTGK---FDDHWVFWIGPLVGAVIGSLLYNYLL 223
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: MIP_CANFA (Lens fiber major intrinsic protein OS=Canis familiaris GN=MIP PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.641e-24 Identity = 62/177 (35.03%), Postives = 94/177 (53.11%), Query Frame = 2 Query: 11 LVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 541 LV ISG H+NPAVTF + ++SL+RA YM AQ LGA+ G ++ + NT+ G + G A EI T V +F+ D +R+ R V L +GF++ + HL + TG G+NPARSF A++ N + +HW++WVGP +G + + ++L Sbjct: 55 LVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAVRG-NLALNTLHPGVSVGQATTVEIFLTLQFVLCIFATYDERRNGRLGSV----ALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRN---FTNHWVYWVGPIIGGGLGSLLYDFLL 223
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: TIP41_ARATH (Aquaporin TIP4-1 OS=Arabidopsis thaliana GN=TIP4-1 PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.450e-24 Identity = 69/180 (38.33%), Postives = 99/180 (55.00%), Query Frame = 2 Query: 8 VLVYCTAG-ISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSA-TDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 541 V V +AG ISGGH+NPAVT GL L +S+ RA Y + Q L + L + + +G +T+ASG + + EII TF L++TV++ DPK+ + D P+L GF V LA +G +NPARSFG A++ N W DHW++WVGP +G A ++ +L Sbjct: 64 VAVMISAGHISGGHLNPAVTLGLLLGGHISVFRAFLYWIDQLLASSAACFL----LSYLTGGMGTPVHTLASGVSYTQGIIWEIILTFSLLFTVYATIVDPKKGSLDGFGPLLT----GFVVGANILAGGAFSGASMNPARSFGPALVSGN---WTDHWVYWVGPLIGGGLAGFIYENVL 232
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: MIP_RAT (Lens fiber major intrinsic protein (Fragment) OS=Rattus norvegicus GN=Mip PE=1 SV=2) HSP 1 Score: 111.694 bits (278), Expect = 3.450e-24 Identity = 61/177 (34.46%), Postives = 95/177 (53.67%), Query Frame = 2 Query: 11 LVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 541 LV ISG H+NPAVTF + ++SL+RA Y+ AQ LGA+ G ++ + NT+ +G + G A EI T V +F+ D +R+ R V L +GF++ + HL + TG G+NPARSF A++ N + +HW++WVGP +G + + ++L Sbjct: 53 LVQTVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYIAAQLLGAVAGAAVLYSVTPPAVRG-NLALNTLHAGVSVGQATTVEIFLTLQFVLCIFATYDERRNGRMGSV----ALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRN---FSNHWVYWVGPIIGGGLGSLLYDFLL 221
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: MIP_MOUSE (Lens fiber major intrinsic protein OS=Mus musculus GN=Mip PE=1 SV=2) HSP 1 Score: 111.694 bits (278), Expect = 3.450e-24 Identity = 61/177 (34.46%), Postives = 95/177 (53.67%), Query Frame = 2 Query: 11 LVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 541 LV ISG H+NPAVTF + ++SL+RA Y+ AQ LGA+ G ++ + NT+ +G + G A EI T V +F+ D +R+ R V L +GF++ + HL + TG G+NPARSF A++ N + +HW++WVGP +G + + ++L Sbjct: 55 LVQTVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYIAAQLLGAVAGAAVLYSVTPPAVRG-NLALNTLHAGVSVGQATTVEIFLTLQFVLCIFATYDERRNGRMGSV----ALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRN---FSNHWVYWVGPIIGGGLGSLLYDFLL 223
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: AQP6_HUMAN (Aquaporin-6 OS=Homo sapiens GN=AQP6 PE=2 SV=2) HSP 1 Score: 111.694 bits (278), Expect = 3.450e-24 Identity = 66/176 (37.50%), Postives = 94/176 (53.41%), Query Frame = 2 Query: 14 VYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 541 V T SG H NPAVT + +SL RAVAY+ AQ +GA G L+ M + G N V + + G A+ E++ T LV VF++TD ++++ IG +V + HL I TG +NPARSFG A+I + HW+FWVGP +GAL A+ + ++L Sbjct: 70 VQVTWKASGAHANPAVTLAFLVGSHISLPRAVAYVAAQLVGATVGAALLYGVMPGDIRET-LGINVVRNSVSTGQAVAVELLLTLQLVLCVFASTDSRQTSGS------PATMIGISVALGHLIGIHFTGCSMNPARSFGPAIIIGK---FTVHWVFWVGPLMGALLASLIYNFVL 235 The following BLAST results are available for this feature:
BLAST of DC900303 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 193
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900303 ID=DC900303; Name=DC900303; organism=Citrus sinensis; type=EST; length=658bpback to top |