DC900295
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXP24_ORYSJ (Expansin-A24 OS=Oryza sativa subsp. japonica GN=EXPA24 PE=2 SV=2) HSP 1 Score: 306.605 bits (784), Expect = 8.512e-83 Identity = 146/226 (64.60%), Postives = 168/226 (74.34%), Query Frame = 3 Query: 18 WQSAHATFYGGSDASGTMEGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANE--PAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSR-TGWMSMSRNWGQNWQSNAVLVGQSLSFRVKASDRRSSTSWNIVPANWQFGQTFVGK 686 W AHATFYGG+DASGTM GACGY +LYSQGYG AALSTALFN+G SCG C++I C + P WC G ++ VTATNFCPPN+ LPSDNGGWCNPPRPHFD+A P + KI YRAGI+PV Y+RVPC KKGG+RFTING YFNLVLVTNVA G I +++ GS T WM M RNWG NW S + L GQ LSFRV D ++ NIVP+ W+FGQTF K Sbjct: 50 WLKAHATFYGGADASGTMGGACGYVDLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCKPGV-TVTVTATNFCPPNWNLPSDNGGWCNPPRPHFDMAQPAWEKIGIYRAGIIPVMYQRVPCVKKGGVRFTINGHDYFNLVLVTNVATTGSIKSMDIMGSNSTDWMPMVRNWGANWHSLSYLTGQMLSFRVTNMDGQTLVFRNIVPSGWKFGQTFASK 274
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXP13_ORYSJ (Expansin-A13 OS=Oryza sativa subsp. japonica GN=EXPA13 PE=2 SV=2) HSP 1 Score: 300.056 bits (767), Expect = 7.967e-81 Identity = 139/223 (62.33%), Postives = 168/223 (75.34%), Query Frame = 3 Query: 18 WQSAHATFYGGSDASGTMEGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKC--ANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSRT-GWMSMSRNWGQNWQSNAVLVGQSLSFRVKASDRRSSTSWNIVPANWQFGQTF 677 W AHATFYGG+DASGTM GACGYGNLY+QGYG TAALSTALFN+GL+CG C+++ C + WC G S+ +TATNFCPPN+ LPSD+GGWCNPPRPHFD+A P + KI YR GI+PV Y+RVPC KKGG+RFTING YF LVL+TNV AG I ++VKGS++ WM+M+ NWG W S A L GQ LSFRV +D ++ N+V W+FGQTF Sbjct: 34 WVRAHATFYGGADASGTMGGACGYGNLYAQGYGTRTAALSTALFNDGLACGQCYKLVCDRKTDRTWCKPGV-SVTITATNFCPPNWDLPSDSGGWCNPPRPHFDMAQPAWEKIGIYRGGIIPVIYQRVPCMKKGGVRFTINGHDYFQLVLLTNVGAAGSIKAMDVKGSKSPDWMAMAHNWGAQWHSLAYLTGQGLSFRVTITDGQTLVFPNVVRPGWRFGQTF 255
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXP28_ORYSJ (Expansin-A28 OS=Oryza sativa subsp. japonica GN=EXPA28 PE=2 SV=2) HSP 1 Score: 299.286 bits (765), Expect = 1.359e-80 Identity = 134/226 (59.29%), Postives = 174/226 (76.99%), Query Frame = 3 Query: 6 SGGPWQSAHATFYGGSDASGTMEGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKC--ANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSRTGWMSMSRNWGQNWQSNAVLVGQSLSFRVKASDRRSSTSWNIVPANWQFGQTF 677 + G W S ATFYGG DASGTM GACGYGNLY+QGYGV AALSTALFN G SCG C+ I C + P WC +G+ ++ +TATN CPPN+AL +D+GGWCNPPRPHFD++ P + I YRAGIVPV Y++V C ++GG+RFT++GF YF LVL+TNVAG+G + ++VKGS+TGW+ ++RNWG NWQ N+ LVGQ+LSFRV ++ ++ ++VP W+FG TF Sbjct: 23 AAGGWVSGTATFYGGKDASGTMGGACGYGNLYTQGYGVYNAALSTALFNGGASCGQCYLIMCDASKTPEWCKAGT-AVTITATNLCPPNWALANDDGGWCNPPRPHFDMSQPAWETIGIYRAGIVPVLYQQVKCWRQGGVRFTVSGFNYFELVLITNVAGSGSVQAMSVKGSKTGWIPLARNWGANWQCNSALVGQALSFRVTSTGGQTLQINSVVPEWWEFGTTF 247
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXP11_ARATH (Expansin-A11 OS=Arabidopsis thaliana GN=EXPA11 PE=2 SV=1) HSP 1 Score: 299.286 bits (765), Expect = 1.359e-80 Identity = 137/220 (62.27%), Postives = 168/220 (76.36%), Query Frame = 3 Query: 24 SAHATFYGGSDASGTMEGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKC--ANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSRTGWMSMSRNWGQNWQSNAVLVGQSLSFRVKASDRRSSTSWNIVPANWQFGQTF 677 + HATFYGGSDASGTM GACGYG+LYS GYG TAALSTALFN+G SCG C+ I C A + WC G+ S+++TATNFCPPN+ALP++NGGWCNPP HFD+A P + KI YR GIVPV ++RV C KKGG+RF ING YF LV + NV GAG I V++KGS+TGW++MSRNWG NWQSNA L GQ+LSF + +D + N+VP++W FGQ + Sbjct: 28 NGHATFYGGSDASGTMGGACGYGDLYSAGYGTMTAALSTALFNDGASCGECYRITCDHAADSRWCLKGA-SVVITATNFCPPNFALPNNNGGWCNPPLKHFDMAQPAWEKIGIYRGGIVPVVFQRVSCYKKGGVRFRINGRDYFELVNIQNVGGAGSIKSVSIKGSKTGWLAMSRNWGANWQSNAYLDGQALSFSITTTDGATRVFLNVVPSSWSFGQIY 246
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXPA9_ORYSJ (Expansin-A9 OS=Oryza sativa subsp. japonica GN=EXPA9 PE=2 SV=2) HSP 1 Score: 298.901 bits (764), Expect = 1.775e-80 Identity = 138/221 (62.44%), Postives = 168/221 (76.02%), Query Frame = 3 Query: 18 WQSAHATFYGGSDASGTMEGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKC-ANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSRTGWMSMSRNWGQNWQSNAVLVGQSLSFRVKASDRRSSTSWNIVPANWQFGQTF 677 W SA ATFYGGSDASGTM G+CGYGN+YS GYG NT ALS+AL+ +G SCGAC+ + C A+ WC +G+ S+ VTATN+CPPNY+ D GGWCNPPR HFD++ P + IA Y +GIVPV Y R PCR+ GGIRF I G Y+ LVLVTNVAG+G + VKGS T W+SMSRNWG+NWQSNA L GQ+LSFRV+A D T++++ PANWQFG T+ Sbjct: 27 WTSATATFYGGSDASGTMGGSCGYGNMYSAGYGTNTTALSSALYGDGASCGACYLVTCDASATRWCKNGT-SVTVTATNYCPPNYSESGDAGGWCNPPRRHFDMSQPAWEAIAVYSSGIVPVRYARTPCRRVGGIRFGIAGHDYYELVLVTNVAGSGAVAAAWVKGSGTEWLSMSRNWGENWQSNAYLTGQALSFRVQADDGGVVTAYDVAPANWQFGSTY 246
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXP25_ORYSJ (Expansin-A25 OS=Oryza sativa subsp. japonica GN=EXPA25 PE=2 SV=2) HSP 1 Score: 296.975 bits (759), Expect = 6.744e-80 Identity = 132/222 (59.46%), Postives = 173/222 (77.93%), Query Frame = 3 Query: 18 WQSAHATFYGGSDASGTMEGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKC--ANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSRTGWMSMSRNWGQNWQSNAVLVGQSLSFRVKASDRRSSTSWNIVPANWQFGQTF 677 W ATFYGG+DASGTM GACGYGNLY+ GYG NTAALS+ LFN+G SCG C+ I C A P WC +G+ ++ +TATN CPPN+ALPS++GGWCNPPRPHFD+A P +L+I Y+AGI+PV Y++V C ++GGIRFT+ GF +F LVLV+NVAG+G + V+VKG TGW++++RNWG NWQ N+ LVGQ+LSF V ++ ++ +N+VP+ W FG TF Sbjct: 27 WNKGTATFYGGADASGTMGGACGYGNLYTAGYGTNTAALSSVLFNDGWSCGQCYLIMCDAAATPQWCRAGA-AVTITATNLCPPNWALPSNSGGWCNPPRPHFDMAEPAWLQIGIYKAGIIPVLYQQVKCWRQGGIRFTMGGFNFFELVLVSNVAGSGSVRSVSVKGGSTGWITLNRNWGANWQCNSGLVGQALSFAVTSTGGQTLYIYNVVPSWWSFGMTF 247
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXP15_ORYSJ (Expansin-A15 OS=Oryza sativa subsp. japonica GN=EXPA15 PE=2 SV=2) HSP 1 Score: 295.819 bits (756), Expect = 1.502e-79 Identity = 139/222 (62.61%), Postives = 170/222 (76.58%), Query Frame = 3 Query: 18 WQSAHATFYGGSDASGTMEGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCAN--EPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSRTGWMSMSRNWGQNWQSNAVLVGQSLSFRVKASDRRSSTSWNIVPANWQFGQTF 677 W S ATFYGGSDASGTM GACGYGNLY GYG NTAALS+ALFN+G SCG C++I C + EP WC G ++ +T TN CPPNYAL S++GGWCNPPR HFD+A P +L+I Y+AGIVPV Y+RVPC K+GG+RFT+ GF YF LVL++NVAG+G I V VKG T M +SRNWG NWQS+A LVGQ+L+F V ++ ++ NIVPA W+FGQ+F Sbjct: 32 WSSGTATFYGGSDASGTMGGACGYGNLYWSGYGTNTAALSSALFNDGASCGQCYQIACDHQAEPRWCLQGR-TVTITGTNLCPPNYALSSNDGGWCNPPRTHFDMAEPAWLQIGIYKAGIVPVLYQRVPCVKQGGVRFTMGGFNYFELVLISNVAGSGSIQSVWVKGPNTDRMPLSRNWGANWQSHAGLVGQTLTFGVTSTGGQTLVFQNIVPAWWKFGQSF 252
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXP31_ORYSJ (Expansin-A31 OS=Oryza sativa subsp. japonica GN=EXPA31 PE=2 SV=2) HSP 1 Score: 293.893 bits (751), Expect = 5.709e-79 Identity = 135/222 (60.81%), Postives = 165/222 (74.32%), Query Frame = 3 Query: 18 WQSAHATFYGGSDASGTMEGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKC--ANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSRTGWMSMSRNWGQNWQSNAVLVGQSLSFRVKASDRRSSTSWNIVPANWQFGQTF 677 W A ATFYGGSD SGTM GACGYGNLY QGYGV+ AALS ALFN+G SCG C+ I C + P WC +G+ ++ VTATN CPPN+ALPSD GGWCNPPRPHFD++ P + +I Y+AGIVPV Y+RV C ++GG+RFT+ G YF LVL+TNVAG+G + +KG+ TGW+ MSRNWG NWQS A L GQ+LSF V + + ++ PA WQFGQTF Sbjct: 28 WSPATATFYGGSDGSGTMGGACGYGNLYDQGYGVDNAALSQALFNDGASCGQCYLIVCDTSRAPQWCKAGT-AVTVTATNLCPPNWALPSDGGGWCNPPRPHFDMSQPAWEQIGVYQAGIVPVLYQRVRCWRQGGVRFTVAGLNYFELVLITNVAGSGSVASAWIKGTNTGWIQMSRNWGANWQSLAGLAGQALSFAVTTTGGQYLQFQDVAPAWWQFGQTF 248
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXP12_ORYSJ (Expansin-A12 OS=Oryza sativa subsp. japonica GN=EXPA12 PE=2 SV=1) HSP 1 Score: 293.123 bits (749), Expect = 9.739e-79 Identity = 131/219 (59.82%), Postives = 169/219 (77.17%), Query Frame = 3 Query: 24 SAHATFYGGSDASGTMEGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKC-ANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSRTGWMSMSRNWGQNWQSNAVLVGQSLSFRVKASDRRSSTSWNIVPANWQFGQTF 677 S ATFYGGSDASGTM GACGYGNLYS GYG NTAALS+ALFN+G +CG C++I C + WC +G+ S+ +TATN CPP+Y+ PS++GGWCNPPR HFD+A P + +I YR GIVPV+++RV C +KGG+RFTING YF LVL+TNV G G I V +KG++TGW++MSRNWG NWQ+N L Q++SF V ++ ++ ++ P+NWQFGQTF Sbjct: 26 SGTATFYGGSDASGTMGGACGYGNLYSTGYGTNTAALSSALFNDGAACGECYQITCDQSNSKWCKAGT-SVTITATNLCPPDYSKPSNDGGWCNPPRQHFDMAQPAWEQIGVYRGGIVPVNFQRVSCTRKGGVRFTINGNSYFELVLITNVGGPGSIKSVQIKGTKTGWVTMSRNWGANWQANNYLNNQAISFSVTSTAGKTLVFEDVAPSNWQFGQTF 243
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXP22_ARATH (Expansin-A22 OS=Arabidopsis thaliana GN=EXPA22 PE=2 SV=2) HSP 1 Score: 291.582 bits (745), Expect = 2.834e-78 Identity = 131/223 (58.74%), Postives = 163/223 (73.09%), Query Frame = 3 Query: 18 WQSAHATFYGGSDASGTMEGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSRTGWMSMSRNWGQNWQSNAVLVGQSLSFRVKASDRRSSTSWNIVPANWQFGQTFVGK 686 W A ATFYG T +GACGYGNL+ QGYG+ TAALSTALFN+G +CGAC+EI C +P WC GS + +TATNFCP NY+ +D WCNPP+ HFDL++ MFLKIA+Y+AG+VPV YRR+PC K GG++F G YF +VL+ NV GAGDI V VKG++TGW++M +NWGQNW + VL GQ LSFRV SD + WN++P NW FGQTF G+ Sbjct: 52 WYDARATFYGDIHGGDTQQGACGYGNLFRQGYGLATAALSTALFNDGYTCGACYEIMCTRDPQWCLPGS--VKITATNFCPANYSKTTDL--WCNPPQKHFDLSLAMFLKIAKYKAGVVPVRYRRIPCSKTGGVKFETKGNPYFLMVLIYNVGGAGDIKYVQVKGNKTGWITMKKNWGQNWTTITVLTGQGLSFRVTTSDGITKDFWNVMPKNWGFGQTFDGR 270 The following BLAST results are available for this feature:
BLAST of DC900295 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 95
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900295 ID=DC900295; Name=DC900295; organism=Citrus sinensis; type=EST; length=717bpback to top |