DC900295
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXPB5_ORYSJ (Expansin-B5 OS=Oryza sativa subsp. japonica GN=EXPB5 PE=2 SV=2) HSP 1 Score: 119.013 bits (297), Expect = 2.517e-26 Identity = 75/238 (31.51%), Postives = 115/238 (48.32%), Query Frame = 3 Query: 9 GGPWQSAHATFYGGSDASGTMEGACGYGNLYSQ-GYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAE-------YRAGIVPVSYRRVPCRKKGGIRFTINGFR--YFNLVLVTNVAGAGDILRVNVKGSR--TGWMSMSRNWGQNWQSNAVL---VGQSLSFRVKASDRRSSTSWNIVPANWQFGQTF 677 G W S AT+YGG G+ GACGY + Q + AA +LF NG CG+C++IKC A SG P + V T+ CP GG C HFD++ F +A AG++ + Y+RVPCR + F ++ Y+ +LV G GD+ V++ +R GW +M ++WG W+ N+ + S R+ + + + N++P+ WQ G T+ Sbjct: 42 GYGWSSGGATWYGGPQGDGSEGGACGYQSAVGQRPFSSMIAAGGPSLFKNGKGCGSCYQIKCTGNRAC--SGRP-VTVVITDSCP---------GGVCLNEAAHFDMSGTAFGAMANRGMGDRLRSAGVLKIQYKRVPCRFAMNVAFKVDAGSNPYYLAILVQYANGDGDLAAVHIMEARGGGGWKAMQQSWGATWRLNSNTGKPLSPPFSIRLTSGSGKVLVANNVIPSGWQAGLTY 267
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXB11_ORYSJ (Expansin-B11 OS=Oryza sativa subsp. japonica GN=EXPB11 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.381e-24 Identity = 84/249 (33.73%), Postives = 123/249 (49.40%), Query Frame = 3 Query: 3 YSGGP-------WQSAHATFYGGSDASGTMEGACGYGNLYSQG-YGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAE-------YRAGIVPVSYRRVPCRKKG-GIRFTI----NGFRYFNLVLVTNVAGAGDILRVNVKGSRTGWMSMSRNWGQNWQSNAVLVGQSL----SFRVKASDRRSSTSWNIVPANWQFGQTF 677 Y+G P W +A AT+YG + G+ GACGY Q + AA S +L+ G CGAC+E+KC A SG P+ +V T+ CP GG C HFD++ +A+ AGI+ V YRRVPC+ G I F + N F YF VL+ G GD+ V++ + GW M +NWG W+ N+ G++L S R+ + + + N++PA+W+ G T+ Sbjct: 52 YTGSPSVTVTTGWAAAGATYYGAPNGDGSDGGACGYQTAVGQRPFSSMIAAGSPSLYKGGKGCGACYEVKCTTNAAC--SGQPATVV-ITDECP---------GGICLAGAAHFDMSGTSMGAMAKPGMADKLRAAGILQVQYRRVPCKYSGVNIAFRVDQGANPF-YFE-VLIEFEDGDGDLNAVDLMEAGCGWTPMVQNWGALWRYNS-NTGKALKAPFSLRLTSDSGKVLVANNVIPASWKPGVTY 285
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXB15_ORYSJ (Expansin-B15 OS=Oryza sativa subsp. japonica GN=EXPB15 PE=3 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 1.804e-24 Identity = 74/237 (31.22%), Postives = 121/237 (51.05%), Query Frame = 3 Query: 18 WQSAHATFYGGSDASGTMEGACGY-GNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAE-------YRAGIVPVSYRRVPCRKKGGIRFTI-----NGFRYFNLVLVTNVAGAGDILRVNV--KGSRTGWMSMSRNWGQNWQSNAVLVGQS-LSFRVKASDRRSSTSWNIVPANWQFGQTFV 680 W + AT+YG ++ +G+ GACGY G ++ + AA S +++ +GL CG+C+++KC A SG+P + V T+ CP GG C HFDL+ F +A AG++ + Y RVPC GG++ T + YF VLV G GD+ V + G+ W M ++WG W+ NA Q+ S R+ +S ++ + N++P+ W+ G +++ Sbjct: 37 WSNGGATWYGAANGAGSDGGACGYQGAVFQAPFSSMIAAGSPSIYKSGLGCGSCYQVKCTGNSAC--SGNP-VTVVLTDECP---------GGPCLSEPVHFDLSGTAFGAMANPGQADQLRAAGVLQIQYNRVPC-NWGGVKLTFVVDVGSNPNYF-AVLVKYENGDGDLSGVELMQTGAGAAWTQMQQSWGAVWKLNAGSALQAPFSIRLTSSSGKTLVASNVIPSGWKPGMSYI 259
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXB18_ORYSJ (Expansin-B18 OS=Oryza sativa subsp. japonica GN=EXPB18 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.293e-22 Identity = 73/236 (30.93%), Postives = 120/236 (50.85%), Query Frame = 3 Query: 18 WQSAHATFYGGSDASGTMEGACGYGNLYSQG-YGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAE-------YRAGIVPVSYRRVPCRKKGGIRFTI-----NGFRYFNLVLVTNVAGAGDILRVNV--KGSRTGWMSMSRNWGQNWQSNAVLVGQS-LSFRVKASDRRSSTSWNIVPANWQFGQTF 677 W + AT+YG ++ +G+ GACGY Q + AA S +++ +GL CG+C+++KC+ A SG+P + V T+ CP GG C HFDL+ F +A AG++ + Y RVPC GG+ T + YF VLV G GD+ +++ G+ W M ++WG W+ +A Q+ LS R+ +S ++ + N++P+ W+ G ++ Sbjct: 37 WSNGGATWYGAANGAGSDGGACGYQAAVDQAPFSSMIAAGSPSIYKSGLGCGSCYQVKCSGNSAC--SGNP-VTVVLTDECP---------GGPCLSEPVHFDLSGTAFGAMANPGQADQLRAAGVLQIQYNRVPC-NWGGVMLTFAVDAGSNPSYF-AVLVKYENGDGDLSGMDLMQTGAGAAWTPMQQSWGAVWKLSAGAALQAPLSIRLTSSSGKTLVASNVIPSGWKPGASY 258
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXB17_ORYSJ (Expansin-B17 OS=Oryza sativa subsp. japonica GN=EXPB17 PE=3 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 3.520e-20 Identity = 71/236 (30.08%), Postives = 112/236 (47.46%), Query Frame = 3 Query: 18 WQSAHATFYGGSDASGTMEGACGYGNLYS-QGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRA-------GIVPVSYRRVPCRKKG-GIRFTIN--GFRYFNLVLVTNVAGAGDILRVNVK-GSRTGWMSMSRNWGQNW-QSNAVLVGQSLSFRVKASDRRSSTSWNIVPANWQFGQTFVGK 686 W+ A AT+YG ++ G+ GACGYG+L ++S LF +G CGAC+++KC + C + +++V T+ CP GG C R HFDL+ F ++A A G + V YRR C+ G I F +N ++ +LV G GDI + +K + W+ M WG W LVG S +++ T+ +++P NW+ T+ + Sbjct: 48 WRPATATWYGDAEGDGSTGGACGYGSLVDVVPMKARVGSVSPVLFKDGEGCGACYKVKCLDH-GICSRRAVTVIV--TDECP---------GGLCAFGRTHFDLSGAAFSRMAVAGAGGHLRDRGQLSVVYRRTACKYGGKNIAFRVNEGSTNFWLSLLVEFEDGQGDIGSMQIKQANSVEWLDMKHVWGATWCLVRGPLVGPFSVRLTTLSAQKALTARDVIPRNWKPTATYTSR 271
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXPB7_ORYSJ (Expansin-B7 OS=Oryza sativa subsp. japonica GN=EXPB7 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.005e-20 Identity = 69/243 (28.40%), Postives = 116/243 (47.74%), Query Frame = 3 Query: 9 GGPWQSAHATFYGGSDASGTME--GACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAE-------YRAGIVPVSYRRVPCRKKG-GIRFTI--NGFRYFNLVLVTNVAGAGDILRVN----------VKGSRTG-WMSMSRNWGQNWQ--SNAVLVGQSLSFRVKASDRRSSTSWNIVPANWQ 662 GG W +A AT+YG + +G + GACG+ N+ + T+ + LF +G CG+C++I+C PA C ++++T N+ P + HFDL+ F +A+ AGI+ + +RRVPC+ G + F + + +LV G GD+++V+ V G+ TG W M +WG W+ +N L G S R+ ++ + ++PA+WQ Sbjct: 89 GGGWLNARATWYGAPNGAGPDDNGGACGFKNVNLPPFSAMTSCGNEPLFKDGKGCGSCYQIRCVGHPA-CSGLPETVIITDMNYYPVSLY--------------HFDLSGTAFGAMAKDNRNDELRHAGIIDIQFRRVPCQYPGLTVTFHVEQGSNPVYMAILVEYENGDGDVVQVDLMESRYSTGGVDGTPTGVWTPMRESWGSIWRLDTNHPLQG-PFSLRITNESGKTLIADQVIPADWQ 315
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXB16_ORYSJ (Expansin-B16 OS=Oryza sativa subsp. japonica GN=EXPB16 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.024e-19 Identity = 70/236 (29.66%), Postives = 109/236 (46.19%), Query Frame = 3 Query: 18 WQSAHATFYGGSDASGTMEGACGYGNLYS-QGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAE-------YRAGIVPVSYRRVPCRKKG-GIRFTIN--GFRYFNLVLVTNVAGAGDILRVNVKGSRTG-WMSMSRNWGQNWQ-SNAVLVGQSLSFRVKASDRRSSTSWNIVPANWQFGQTFVGK 686 W A AT+YG +D G+ GACGYG L A+S LF G CGAC++++C + + C + +++V T+ CP GG C R HFDL+ F ++A G + V YRR C+ G I F +N ++ +LV G GDI + +K + + W M WG W + LVG + R++ ++ +++P NW T+ + Sbjct: 45 WHPATATWYGSADGDGSDGGACGYGTLVDVVPMKTRVGAVSPVLFKGGEGCGACYKVRCL-DASICSRRAVTVIV--TDECP---------GGVCAFGRTHFDLSGAAFARLAVAGHGGQLQNRGEISVVYRRTACKYGGKNIAFHVNEGSTTFWLSLLVEFEDGDGDIGSMQLKQANSAQWQDMKHIWGATWSLTPGPLVGPFSVRLTTLTTRQTLSAQDVIPKNWTPKATYTSR 268
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXPB4_ORYSJ (Expansin-B4 OS=Oryza sativa subsp. japonica GN=EXPB4 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.747e-19 Identity = 70/247 (28.34%), Postives = 121/247 (48.99%), Query Frame = 3 Query: 12 GPWQSAHATFYGGSDASGTME--GACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAE-------YRAGIVPVSYRRVPCRKKG-GIRFTINGFR---YFNLVLVTNVAGAGDILRVNVKGSRTG-------WMSMSRNWGQNWQSNAVLVGQS-LSFRVKASDRRSSTSWNIVPANWQ---FGQTFV 680 GPW A AT+YG + +G + GACG+ + + T+ + LF +G CG+C++I+C + + C S ++++T N+ P P HFDL+ F ++A+ +GI+ + + RVPC G I F + + YF VLV G GD+++V++ S+T W M +WG W+ + Q+ S R++ ++ + N++PANW+ F ++FV Sbjct: 53 GPWTKARATWYGQPNGAGPDDNGGACGFKHTNQYPFMSMTSCGNQPLFKDGKGCGSCYKIRCTKDQS-CSGRSETVIITDMNYYP---VAPF-----------HFDLSGTAFGRLAKPGLNDKLRHSGIIDIEFTRVPCEFPGLKIGFHVEEYSNPVYF-AVLVEYEDGDGDVVQVDLMESKTAHGPPTGRWTPMRESWGSIWRLDTNHRLQAPFSIRIRNESGKTLVANNVIPANWRPNTFYRSFV 283
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXPB3_ORYSJ (Expansin-B3 OS=Oryza sativa subsp. japonica GN=EXPB3 PE=2 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 2.282e-19 Identity = 64/230 (27.83%), Postives = 109/230 (47.39%), Query Frame = 3 Query: 18 WQSAHATFYGGSDASGTME--GACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAE-------YRAGIVPVSYRRVPCRKKGGIRFTINGFRYFN----LVLVTNVAGAGDILRVN-VKGSRTGWMSMSRNWGQNWQ--SNAVLVGQSLSFRVKASDRRSSTSWNIVPANW 659 W+ A AT+YG +G + GACG+ N + T+ + +F +G CG+C++I+C N PA C ++++T N+ P + + HFDL+ F +A+ AGI+ + ++RVPC G++ T + N VLV G GD+++V+ ++ + W M +WG W+ SN L S R+ + + ++PANW Sbjct: 42 WEVARATWYGAPTGAGPDDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRCVNHPA-CSGNPETVIITDMNYYPVS--------------KYHFDLSGTAFGAMAKPGQNDQLRHAGIIDIQFKRVPCNFP-GLKVTFHVEEGSNPVYFAVLVEYEDGDGDVVQVDLMEANSQSWTPMRESWGSIWRLDSNHRLTA-PFSLRITNESGKQLVASQVIPANW 254
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXPB3_ARATH (Expansin-B3 OS=Arabidopsis thaliana GN=EXPB3 PE=2 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 2.980e-19 Identity = 70/236 (29.66%), Postives = 115/236 (48.73%), Query Frame = 3 Query: 6 SGGPWQSAHATFYGGSDASGTMEGACGYGNLYS-QGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIA-------EYRAGIVPVSYRRVPCRKKG-GIRFTIN--GFRYFNLVLVTNVAGAGDI--LRVNVKGSRTGWMSMSRNWGQNWQSNAVLVGQSLS--FRVK---ASDRRSSTSWNIVPANW 659 S W A AT+YG + G+ GACGYG L + A++ LF NG CGAC++++C ++ + C + ++++ T+ CP C+ HFDL+ +F ++A G++PV YRR C+ +G I F +N ++ +LV G GDI + + G+R W+ M WG NW ++G L F +K S ++ ++ ++VP NW Sbjct: 32 SNSHWLPAVATWYGSPNGDGSDGGACGYGTLVDVKPLHARVGAVNPILFKNGEGCGACYKVRCLDK-SICSRRAVTVII--TDECP-----------GCSKTSTHFDLSGAVFGRLAIAGESGPLRNRGLIPVIYRRTACKYRGKNIAFHVNEGSTDFWLSLLVEFEDGEGDIGSMHIRQAGARE-WLEMKHVWGANW----CIIGGPLKGPFSIKLTTLSAGKTLSATDVVPRNW 248 The following BLAST results are available for this feature:
BLAST of DC900295 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 95
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900295 ID=DC900295; Name=DC900295; organism=Citrus sinensis; type=EST; length=717bpback to top |