DC900295
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXB12_ORYSJ (Expansin-B12 OS=Oryza sativa subsp. japonica GN=EXPB12 PE=2 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 3.084e-16 Identity = 66/236 (27.97%), Postives = 105/236 (44.49%), Query Frame = 3 Query: 18 WQSAHATFYGGSDASGTMEGACGYGNLYSQ-GYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAE-------YRAGIVPVSYRRVPCRKKG-GIRFTINGFRYFN--LVLVTNVAGAGDILRVNV----KGSRTGWMSMSRNWGQNWQSNAVLVGQS-LSFRVKASDRRSSTSWNIVPANWQFGQTF 677 W + AT+YG + +G+ GACGY Q + AA S ++++G CG+C+ + CA A SG P + V T+ P L G C HFD++ F +A AG++ + Y RV C G G+ F ++ N +LV D+ V++ G+ W+ M ++WG W+ N+ Q S R+ S + + N +PA W G + Sbjct: 39 WSNGIATWYGDPNGAGSEGGACGYQYAVDQPPFSSRIAAGSPYIYDSGKGCGSCYRVVCAGNEAC--SGIP-VTVVITDQGPGGPCLEELVDGQCMNEAAHFDMSGTAFGAMARPGQADQLRGAGLLQIQYTRVECEWTGVGLTFVVDSGSNPNYLALLVEYDDNDSDLAAVDIMPIGAGASGSWIPMQQSWGAVWRLNSGSALQGPFSVRLTFSSGQMFVASNAIPAGWNPGMAY 271
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: MPAC1_CYNDA (Major pollen allergen Cyn d 1 OS=Cynodon dactylon GN=CYND1 PE=1 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.028e-16 Identity = 69/242 (28.51%), Postives = 112/242 (46.28%), Query Frame = 3 Query: 9 GGPWQSAHATFYGGSDASGTME---GACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAE-------YRAGIVPVSYRRVPCRKKGGIRFTIN----GFRYFNLVLVTNVAGAGDILRVNVKGSRTG-WMSMSRNWGQNWQSNAVL-VGQSLSFRVKASDRRSSTSWNIVPANWQFGQTFVGK 686 G W A ATFYG + + GACGY ++ + TA + +F +GL C AC+EIKC EP C SG P +LV T+ NY + HFDL+ F +A+ +AG + + +RRV C+ G + T + ++ +LV AG G+I+ V++K + ++ M +WG W+ + + S R+ + +++PANW+ + K Sbjct: 15 GSKWLEARATFYGSNPRGAAPDDHGGACGYKDVDKPPFDGMTACGNEPIFKDGLGCRACYEIKC-KEPVEC-SGEP-VLVKITD---KNYE---------HIAAYHFDLSGKAFGAMAKKGQEDKLRKAGELTLQFRRVKCKYPSGTKITFHIEKGSNDHYLALLVKYAAGDGNIVAVDIKPRDSDEFIPMKSSWGAIWRIDPKKPLKGPFSIRLTSEGGAHLVQDDVIPANWKPDTVYTSK 241
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXB11_MAIZE (Expansin-B11 OS=Zea mays GN=EXPB11 PE=1 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.028e-16 Identity = 68/241 (28.22%), Postives = 114/241 (47.30%), Query Frame = 3 Query: 9 GGPWQSAHATFYGGSDASGTME--GACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSIL-VTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAE-------YRAGIVPVSYRRVPCRKKGGIRFTINGFRYFN--LVLVTNVAGAGDILRVNV--KGSRTGWMSMSRNWGQNWQSNA-VLVGQSLSFRVKASDRRSSTSWNIVPANWQFGQTFVGK 686 G W A AT+YG +G + G CGY ++ + A + +F +GL CG+CFEIKC ++PA C SG P ++ +T N+ P HFDLA F +A+ +AGI+ + +RRV C+ + F + N +LV V G GDI+ V++ KGS T + + +WG W+ ++ + ++ ++ + +++PA W+ + K Sbjct: 46 GSDWLDAKATWYGKPTGAGPDDNGGGCGYKDVNKAPFNSMGACGNVPIFKDGLGCGSCFEIKC-DKPAEC-SGKPVVVYITDMNYEP--------------IAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRRVKCKYGSKVTFHLEKGCNPNYLALLVKYVDGDGDIVAVDIKEKGSDT-YEPLKHSWGAIWRKDSDKPIKGPITVQLTTEGGTKTVYDDVIPAGWKPNTAYTAK 269
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXB10_ORYSJ (Expansin-B10 OS=Oryza sativa subsp. japonica GN=EXPB10 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.999e-15 Identity = 66/235 (28.09%), Postives = 109/235 (46.38%), Query Frame = 3 Query: 9 GGPWQSAHATFYGGSDASGTME--GACGYGNLYSQGY-GVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAE-------YRAGIVPVSYRRVPCRKKGGIRFTINGFRYFN----LVLVTNVAGAGDILRVNV--KGSRTGWMSMSRNWGQNWQSNAVL-VGQSLSFRVKASDRRSSTSWNIVPANWQ 662 G W A T+YG +G + GACGY ++ + G+N+ + +F +G CG+CFE+KC ++P C I +T N P HFDL+ F +A+ +AGI+ + +RRV C+ G + T + + N VLV V G GD+++V + KGS W ++ +WG W+ + + S RV + + +++P NW+ Sbjct: 38 GKQWLEARGTWYGKPKGAGPDDNGGACGYKDIDKAPFLGMNSCG-NDPIFKDGKGCGSCFEVKC-SKPEACSDKPVIIHITDMNTEP--------------IAAYHFDLSGHAFGAMAKEGKDEELRKAGIIDMQFRRVRCKYPGETKVTFHVEKGSNPNYFAVLVKYVGGDGDVVKVELKEKGSEE-WKPLNESWGAIWRIDTPKPLKGPFSLRVTTESDQKLVANDVIPDNWK 255
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: MPAL1_LOLPR (Pollen allergen Lol p 1 OS=Lolium perenne PE=1 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 2.611e-15 Identity = 64/243 (26.34%), Postives = 107/243 (44.03%), Query Frame = 3 Query: 9 GGPWQSAHATFYGGSDASGTME--GACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRP-HFDLAMPMFLKIAE-------YRAGIVPVSYRRVPCRKKGGIRFTINGFRYFN----LVLVTNVAGAGDILRVNVK-GSRTGWMSMSRNWGQNWQSNA--VLVGQSLSFRVKASDRRSSTSWNIVPANWQFGQTFVGK 686 G W A +T+YG +G + GACGY N+ + T +T +F +G CG+CFEIKC +P C + ++ +T N P P HFDL+ F +A+ AG + + +RRV C+ + T + + N +LV V G GD++ V++K + W+ + +WG W+ + L G + R S +++P W+ ++ K Sbjct: 38 GDKWLDAKSTWYGKPTGAGPKDNGGACGYKNVDKAPFNGMTGCGNTPIFKDGRGCGSCFEIKC-TKPESCSGEAVTVTITDDNE---------------EPIAPYHFDLSGHAFGSMAKKGEEQNVRSAGELELQFRRVKCKYPDDTKPTFHVEKASNPNYLAILVKYVDGDGDVVAVDIKEKGKDKWIELKESWGAVWRIDTPDKLTG-PFTVRYTTEGGTKSEFEDVIPEGWKADTSYSAK 263
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: MPAP1_PHLPR (Pollen allergen Phl p 1 OS=Phleum pratense GN=PHLPI PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.410e-15 Identity = 66/243 (27.16%), Postives = 111/243 (45.68%), Query Frame = 3 Query: 9 GGPWQSAHATFYGGSDASGTME--GACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRP-HFDLAMPMFLKIAE-------YRAGIVPVSYRRVPCRKKGGIRFTINGFRYFN----LVLVTNVAGAGDILRVNVK-GSRTGWMSMSRNWGQNWQSNA--VLVGQSLSFRVKASDRRSSTSWNIVPANWQFGQTFVGK 686 G W A +T+YG +G + GACGY ++ + T +T +F +G CG+CFEIKC +P C SG P ++ + DN P P HFDL+ F +A+ AG + + +RRV C+ G + T + + N +LV V G GD++ V++K + W+ + +WG W+ + L G + R + + +++P W+ ++ K Sbjct: 38 GDKWLDAKSTWYGKPTGAGPKDNGGACGYKDVDKPPFSGMTGCGNTPIFKSGRGCGSCFEIKC-TKPEAC-SGEPVVV-----------HITDDNE---EPIAPYHFDLSGHAFGAMAKKGDEQKLRSAGELELQFRRVKCKYPEGTKVTFHVEKGSNPNYLALLVKYVNGDGDVVAVDIKEKGKDKWIELKESWGAIWRIDTPDKLTG-PFTVRYTTEGGTKTEAEDVIPEGWKADTSYESK 263
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXLB1_ARATH (Expansin-like B1 OS=Arabidopsis thaliana GN=EXLB1 PE=2 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 5.816e-15 Identity = 66/228 (28.95%), Postives = 101/228 (44.30%), Query Frame = 3 Query: 24 SAHATFYGGSDASGTMEGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKG-GIRFTINGFRY---FNLVLVTNVAGAGDILRVNV-KGSRTGWMSMSRNWGQ-NWQSNAVLVGQSLSFRVKASDRRSSTSW----NIVPANWQFGQTF 677 ++ AT+YG D G CGYG + +S L+NNG CGAC++++C P H + V AT+ + D + P+ + +A P + Y G+V V Y+R+PCR G + + I+ Y + +LV V G DIL V V + W M R +G + N +L F V S + +W N +PA+W G T+ Sbjct: 29 NSRATYYGSPDCKANPRGHCGYGEFGRDINNGEVSGVSWRLWNNGTGCGACYQVRCKIPP---HCSEEGVYVVATD------SGEGDGTDFILSPKAYGRMARP-GTENQLYSFGVVNVEYQRIPCRYAGYNLVYKIHEKSYNPHYLAILVLYVGGVNDILAVEVWQEDCKEWRRMRRVFGAVHDLQNPPRGTLTLRFLVYGS---AGINWIQSPNAIPADWTAGATY 243
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: EXPB1_ORYSJ (Expansin-B1 OS=Oryza sativa subsp. japonica GN=EXPB1a PE=1 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.296e-14 Identity = 67/235 (28.51%), Postives = 105/235 (44.68%), Query Frame = 3 Query: 9 GGPWQSAHATFYGGSDASGTME--GACGYGNLYSQGY-GVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAE-------YRAGIVPVSYRRVPCRKKGGIRFTINGFRYFN----LVLVTNVAGAGDILRVNV--KGSRTGWMSMSRNWGQNWQSNAVL-VGQSLSFRVKASDRRSSTSWNIVPANWQ 662 G W A AT+YG +G + GACGY ++ + G+N+ + +F +G CG+CFEIKC ++P C I VT N P HFDL+ F +A+ +AGI+ +RRV C+ + T + + N +LV VAG GD++ V + KGS W ++ +WG W+ + + S RV + + +P W+ Sbjct: 38 GDKWLEAKATWYGAPKGAGPKDNGGACGYKDVDKAPFLGMNSCG-NDPIFKDGKGCGSCFEIKC-SKPEACSDKPALIHVTDMNDEP--------------IAAYHFDLSGLAFGAMAKDGKDEELRKAGIIDTQFRRVKCKYPADTKITFHIEKASNPNYLALLVKYVAGDGDVVEVEIKEKGSEE-WKALKESWGAIWRIDTPKPLKGPFSVRVTTEGGEKIIAEDAIPDGWK 255
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: MPAH1_HOLLA (Major pollen allergen Hol l 1 OS=Holcus lanatus PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.210e-14 Identity = 62/243 (25.51%), Postives = 106/243 (43.62%), Query Frame = 3 Query: 9 GGPWQSAHATFYGGSDASGTME--GACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRP-HFDLAMPMFLKIAE-------YRAGIVPVSYRRVPCRKKGGIRFTINGFRYFN----LVLVTNVAGAGDILRVNVK-GSRTGWMSMSRNWGQNWQSNA--VLVGQSLSFRVKASDRRSSTSWNIVPANWQFGQTFVGK 686 G W A +T+YG +G + GACGY ++ + T +T +F +G CG+CFEIKC +P C ++ +T N P P HFDL+ F +A+ AG + + +RRV C+ G + T + + N +LV + G GD++ V++K + W+ + +WG W+ + L G + R + +++P W+ + K Sbjct: 40 GDEWLDAKSTWYGKPTGAGPKDNGGACGYKDVDKPPFSGMTGCGNTPIFKDGRGCGSCFEIKC-TKPESCSGEPVTVHITDDNE---------------EPIAPYHFDLSGHAFGSMAKKGEEQKLRSAGELELKFRRVKCKYPDGTKPTFHVEKGSNPNYLALLVKYIDGDGDVVAVDIKEKGKDKWIELKESWGAVWRVDTPDKLTG-PFTVRYTTEGGTKGEAEDVIPEGWKADTAYEAK 265
BLAST of DC900295 vs. ExPASy Swiss-Prot
Match: MPAP1_PHAAQ (Major pollen allergen Pha a 1 OS=Phalaris aquatica PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.431e-14 Identity = 62/200 (31.00%), Postives = 97/200 (48.50%), Query Frame = 3 Query: 9 GGPWQSAHATFYGGSDASGTME--GACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRP-HFDLAMPMFLKIAE-------YRAGIVPVSYRRVPCRKKGGIRFTINGFRYFN----LVLVTNVAGAGDILRVNVK-GSRTGWMSMSRNWGQNWQ 563 G W A +T+YG +G + GACGY ++ + T +T +F +G CG+CFE+KC ++P C SG P I V T+ DN P P HFDL+ F +A+ AG + + +RRV C+ G + T + + N +LV V G GD++ V++K + W+ + +WG W+ Sbjct: 44 GDKWLDAKSTWYGKPTGAGPKDNGGACGYKDVDKAPFNGMTGCGNTPIFKDGRGCGSCFELKC-SKPESC-SGEP-ITVHITD----------DNE---EPIAPYHFDLSGHAFGSMAKKGEEENVRGAGELELQFRRVKCKYPDGTKPTFHVEKGSNPNYLALLVKYVDGDGDVVAVDIKEKGKDKWIELKESWGAIWR 227 The following BLAST results are available for this feature:
BLAST of DC900295 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 95
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900295 ID=DC900295; Name=DC900295; organism=Citrus sinensis; type=EST; length=717bpback to top |