DC900289
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PRS6A_RAT (26S protease regulatory subunit 6A OS=Rattus norvegicus GN=Psmc3 PE=2 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 5.694e-47 Identity = 87/151 (57.62%), Postives = 115/151 (76.16%), Query Frame = 2 Query: 23 DLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 475 D F +A + +PSI+FIDE+DA+GTKR+D+ G+RE+QRTMLELLNQLDGF VKVI ATNR++ LDPALLR GR+DRKIEFP+P+ + R RI QIH+ +M ++ DVN EE D+F+GA KA+C EAG++ALR ++TH D+ Sbjct: 270 DAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDY 420
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PRS6A_HUMAN (26S protease regulatory subunit 6A OS=Homo sapiens GN=PSMC3 PE=1 SV=3) HSP 1 Score: 187.578 bits (475), Expect = 5.694e-47 Identity = 87/151 (57.62%), Postives = 115/151 (76.16%), Query Frame = 2 Query: 23 DLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 475 D F +A + +PSI+FIDE+DA+GTKR+D+ G+RE+QRTMLELLNQLDGF VKVI ATNR++ LDPALLR GR+DRKIEFP+P+ + R RI QIH+ +M ++ DVN EE D+F+GA KA+C EAG++ALR ++TH D+ Sbjct: 270 DAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDY 420
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PRS6A_SOLLC (26S protease regulatory subunit 6A homolog OS=Solanum lycopersicum GN=TBP1 PE=2 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 7.436e-47 Identity = 90/151 (59.60%), Postives = 114/151 (75.50%), Query Frame = 2 Query: 23 DLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 475 D F++A + SP I+FIDEIDA+GTKR+D+ G+RE+QRTMLELLNQLDGF S +KVI ATNR + LDPAL+R GR+DRKIEFP P + R RI QIH+ +M + DVN EE + D+F+GA +KA+C EAG+LALR +VTH DF Sbjct: 254 DAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVNPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVTHEDF 404
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PRS6A_ORYSJ (26S protease regulatory subunit 6A homolog OS=Oryza sativa subsp. japonica GN=TBP1 PE=2 SV=2) HSP 1 Score: 187.193 bits (474), Expect = 7.436e-47 Identity = 90/151 (59.60%), Postives = 114/151 (75.50%), Query Frame = 2 Query: 23 DLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 475 D F++A + SP I+FIDEIDA+GTKR+D+ G+RE+QRTMLELLNQLDGF S +KVI ATNR + LDPAL+R GR+DRKIEFP P + R RI QIH+ +M + DVN EE + D+F+GA +KA+C EAG+LALR +VTH DF Sbjct: 260 DAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPSEEARARILQIHSRKMNVNPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVTHEDF 410
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PRS6A_MOUSE (26S protease regulatory subunit 6A OS=Mus musculus GN=Psmc3 PE=2 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.657e-46 Identity = 87/150 (58.00%), Postives = 114/150 (76.00%), Query Frame = 2 Query: 23 DLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTD 472 D F +A + +PSI+FIDE+DA+GTKR+D+ G+RE+QRTMLELLNQLDGF VKVI ATNR++ LDPALLR GR+DRKIEFP+P+ + R RI QIH+ +M ++ DVN EE D+F+GA KA+C EAG++ALR ++TH D Sbjct: 273 DAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQSKAVCVEAGMIALRRGATELTHED 422
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PRS6B_ARATH (26S protease regulatory subunit 6B homolog OS=Arabidopsis thaliana GN=RPT3 PE=1 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 2.164e-46 Identity = 87/158 (55.06%), Postives = 123/158 (77.85%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 475 E R D+FR+A + +P+I+FIDE+DA+ T R+DA +G +RE+QR ++ELLNQ+DGFD +VKVI+ATNR ++LDPALLRPGR+DRKIEFPLPD + +R +FQ+ TS+M L+D+V+LE++V D+ S A+I AIC EAG+ A+R+ R + DF Sbjct: 232 EGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTSKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDF 389
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PRS6B_MOUSE (26S protease regulatory subunit 6B OS=Mus musculus GN=Psmc4 PE=1 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 2.826e-46 Identity = 90/158 (56.96%), Postives = 121/158 (76.58%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 475 E R D+FR+A + +P+I+FIDEIDA+ TKR+DA +G +RE+QR +LELLNQ+DGFD +VKVI+ATNR ++LDPALLRPGR+DRKIEFPLPD + +R IF TS+M L+++V+LE++V D+ SGADI +IC G+LA+RE V DF Sbjct: 242 EGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQARGMLAVRETAYIVLAKDF 399
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PRS6A_YEAST (26S protease regulatory subunit 6A OS=Saccharomyces cerevisiae GN=RPT5 PE=1 SV=3) HSP 1 Score: 185.267 bits (469), Expect = 2.826e-46 Identity = 87/151 (57.62%), Postives = 115/151 (76.16%), Query Frame = 2 Query: 23 DLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 475 D F +A + +P+I+FIDE+DA+GTKR+D+ G+RE+QRTMLELLNQLDGF S VKV+ ATNR++ LDPALLR GR+DRKIEFPLP +R +I QIH+ +MT DD+N +E + DEF+GA +KA+ EAG++ALR + V H DF Sbjct: 265 DAFALAKEKAPTIIFIDELDAIGTKRFDSEKSGDREVQRTMLELLNQLDGFSSDDRVKVLAATNRVDVLDPALLRSGRLDRKIEFPLPSEDSRAQILQIHSRKMTTDDDINWQELARSTDEFNGAQLKAVTVEAGMIALRNGQSSVKHEDF 415
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PR6AB_XENLA (26S protease regulatory subunit 6A-B OS=Xenopus laevis GN=psmc3-B PE=2 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 2.826e-46 Identity = 86/151 (56.95%), Postives = 114/151 (75.50%), Query Frame = 2 Query: 23 DLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 475 D F +A + +PSI+FIDE+DA+G KR+D+ G+RE+QRTMLELLNQLDGF VKVI ATNR++ LDPALLR GR+DRKIEFP+P+ + R RI QIH+ +M ++ DVN EE D+F+GA KA+C EAG++ALR ++TH D+ Sbjct: 235 DAFSLAKEKAPSIIFIDELDAIGNKRFDSEKAGDREVQRTMLELLNQLDGFQPTTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGIIALRRGATELTHEDY 385
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PRS6A_DICDI (26S protease regulatory subunit 6A homolog OS=Dictyostelium discoideum GN=psmC3 PE=1 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 3.690e-46 Identity = 85/151 (56.29%), Postives = 116/151 (76.82%), Query Frame = 2 Query: 23 DLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 475 D F +A + P+I+FIDE+DA+GTKR+D+ G+RE+QRTMLELLNQLDGF S ++KVI ATNRI+ LDPALLR GR+DRKIEFPLP+ + R I QIH+ +M ++ DVN +E + ++F+GA +KA+C EAG++ALR ++ H DF Sbjct: 252 DAFALAKEKGPTIIFIDELDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDANIKVIAATNRIDILDPALLRSGRLDRKIEFPLPNEEARAHILQIHSRKMNVSADVNFDELARSSEDFNGAQLKAVCVEAGMIALRRGGTELIHNDF 402 The following BLAST results are available for this feature:
BLAST of DC900289 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 353
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900289 ID=DC900289; Name=DC900289; organism=Citrus sinensis; type=EST; length=706bpback to top |