DC900289
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PRS8_HUMAN (26S protease regulatory subunit 8 OS=Homo sapiens GN=PSMC5 PE=1 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.111e-42 Identity = 86/158 (54.43%), Postives = 116/158 (73.42%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 475 E R +LF +A + +PSI+F+DEID++G+ R + SGG+ E+QRTMLELLNQLDGF++ ++KVI+ATNRI+ LD ALLRPGRIDRKIEFP P+ + R I +IH+ +M L +NL + SGA++K +CTEAG+ ALRERR+ VT DF Sbjct: 226 EGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDF 383
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PRS8_BOVIN (26S protease regulatory subunit 8 OS=Bos taurus GN=PSMC5 PE=2 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.111e-42 Identity = 86/158 (54.43%), Postives = 116/158 (73.42%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 475 E R +LF +A + +PSI+F+DEID++G+ R + SGG+ E+QRTMLELLNQLDGF++ ++KVI+ATNRI+ LD ALLRPGRIDRKIEFP P+ + R I +IH+ +M L +NL + SGA++K +CTEAG+ ALRERR+ VT DF Sbjct: 226 EGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDF 383
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PRS7_SPIOL (26S protease regulatory subunit 7 OS=Spinacia oleracea GN=RPT1 PE=2 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.111e-42 Identity = 83/158 (52.53%), Postives = 113/158 (71.52%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 475 E R +LF++A IVF DE+DA+G R+D GG+ E+QRTMLE++NQLDGFD+RG++KV++ATNR ++LDPALLRPGR+DRK+EF LPD++ R +IF+IHT M D+ E +GADI+++CTEAG+ A+R RR VT DF Sbjct: 245 EGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDF 402
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PRS7_ORYSJ (26S protease regulatory subunit 7 OS=Oryza sativa subsp. japonica GN=RPT1A PE=2 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.111e-42 Identity = 83/158 (52.53%), Postives = 113/158 (71.52%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 475 E R +LF++A IVF DE+DA+G R+D GG+ E+QRTMLE++NQLDGFD+RG++KV++ATNR ++LDPALLRPGR+DRK+EF LPD++ R +IF+IHT M D+ E +GADI+++CTEAG+ A+R RR VT DF Sbjct: 245 EGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDF 402
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PSMR_METTH (Proteasome-activating nucleotidase OS=Methanobacterium thermoautotrophicum GN=pan PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.895e-42 Identity = 85/150 (56.67%), Postives = 113/150 (75.33%), Query Frame = 2 Query: 26 LFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 475 +F +A + SPSI+FIDEIDAV KR + + G+RE+QRT+++LL +LDGF+SRG+V ++ ATNR + LDPALLRPGR DR IE PLP+ RR I +IHTS M LA++V++E D SGAD+KAICTEAG+ A+R+ R +VT DF Sbjct: 236 VFELAKEKSPSIIFIDEIDAVAAKRLKSSTSGDREVQRTLMQLLAELDGFESRGNVGIVAATNRPDILDPALLRPGRFDRFIEVPLPNEDGRREILKIHTSGMALAEEVDIELLARITDGASGADLKAICTEAGMFAIRDERDEVTMADF 385
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PRS8_SCHPO (26S protease regulatory subunit 8 homolog OS=Schizosaccharomyces pombe GN=let1 PE=2 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 3.233e-42 Identity = 86/159 (54.09%), Postives = 116/159 (72.96%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSG-GEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 475 E R +LF +A + +PSI+F+DEID++G+ R D+ G G+ E+QRTMLELLNQLDGF++ ++KVI+ATNRI+ LDPALLRPGRIDRKIEFP P + R I +IH+ M L ++L+ + SGA++K +CTEAG+ ALRERR+ VT DF Sbjct: 222 EGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRSDSSGGSGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPSAEARAEILRIHSRSMNLTRGIDLKSIAEKMNGASGAELKGVCTEAGMFALRERRVHVTQEDF 380
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PSMR_SULSO (Proteasome-activating nucleotidase OS=Sulfolobus solfataricus GN=pan PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 4.222e-42 Identity = 87/157 (55.41%), Postives = 110/157 (70.06%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTD 472 E R +LF +A +PSI+FIDEIDA+G KR D + GEREIQRT+++LL +LDGFD +VK+I ATNRI+ LDPALLRPGR DR IE PLPD K R IF I+ +M + D++NLE + FSGADIK +C EA +A+R+ R KVT D Sbjct: 211 EGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGTSGEREIQRTLMQLLAELDGFDPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFKGRTEIFNIYLKKMKIEDNINLELLSQLTEGFSGADIKNVCVEAAYMAIRDGRNKVTMND 367
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PSMR_PYRAB (Proteasome-activating nucleotidase OS=Pyrococcus abyssi GN=pan PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 7.202e-42 Identity = 88/158 (55.70%), Postives = 113/158 (71.52%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 475 E R +LF +A + +P+I+FIDEIDA+G KR D +GGERE+ RT+++LL ++DGFD RG+VKVI ATNR + LDPALLRPGR DR IE PLPD + R I ++HT RM L +V+L + SGAD+KAI TEAG+ A+RERR VT DF Sbjct: 217 EGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKL-KNVDLRVIAEITEGASGADLKAIATEAGMFAIRERRTYVTQEDF 373
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PSMR_METKA (Proteasome-activating nucleotidase OS=Methanopyrus kandleri GN=pan PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 7.202e-42 Identity = 87/158 (55.06%), Postives = 114/158 (72.15%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 475 E R +LF +A + +PSI+FIDEIDA+G +R + G+RE+QRT+ +LL ++DGFD D+KVI ATNR + LDPALLRPGR DR I+ PLPD + R IF+IHT M LA+DV+L++ + SGADIKAICTEAG++A+RE R VT DF Sbjct: 256 EGARLVRELFELAREKAPSIIFIDEIDAIGARRMRDATSGDREVQRTLTQLLAEMDGFDPLDDIKVIAATNRKDILDPALLRPGRFDRHIKIPLPDEEGRYEIFKIHTRDMNLAEDVDLQKLAKITEGASGADIKAICTEAGMMAIREDRDIVTMDDF 413
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PSMR_PYRHO (Proteasome-activating nucleotidase OS=Pyrococcus horikoshii GN=pan PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 9.407e-42 Identity = 88/158 (55.70%), Postives = 112/158 (70.89%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 475 E R +LF +A + +P+I+FIDEIDA+G KR D +GGERE+ RT+++LL ++DGFD RG+VKVI ATNR + LDPALLRPGR DR IE PLPD + R I ++HT RM L V+L + SGAD+KAI TEAG+ A+RERR VT DF Sbjct: 217 EGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKL-KGVDLRAIAEMTEGASGADLKAIATEAGMFAIRERRTYVTQEDF 373 The following BLAST results are available for this feature:
BLAST of DC900289 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 353
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900289 ID=DC900289; Name=DC900289; organism=Citrus sinensis; type=EST; length=706bpback to top |