DC900289
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PSMR_UNCMA (Proteasome-activating nucleotidase OS=Uncultured methanogenic archaeon RC-I GN=pan PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.605e-41 Identity = 81/158 (51.27%), Postives = 114/158 (72.15%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 475 E R +LF +A + SPSI+FIDEID++G KR D+ + G+RE+QRT+++LL ++DGFD RG+V+++ ATNR + LDPALLRPGR DR I+ P+P + R +I +IH +M LADDV+L + + DE SGAD+ AI EAG+ A+R R V +DF Sbjct: 236 EGARMVRELFELAKEKSPSIIFIDEIDSIGAKRLDSITSGDREVQRTLVQLLAEMDGFDPRGNVRILAATNRPDILDPALLRPGRFDRMIKVPMPTAEAREQILKIHARKMNLADDVDLRKIALITDESSGADLSAIVMEAGMFAIRNNRDVVDSSDF 393
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PSMR_PYRFU (Proteasome-activating nucleotidase OS=Pyrococcus furiosus GN=pan PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.605e-41 Identity = 88/158 (55.70%), Postives = 112/158 (70.89%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 475 E R +LF +A + +P+I+FIDEIDA+G KR D +GGERE+ RT+++LL ++DGFD RG+VKVI ATNR + LDPALLRPGR DR IE PLPD + R I ++HT RM L V+L + SGAD+KAI TEAG+ A+RERR VT DF Sbjct: 214 EGARLVHELFELAKEKAPTIIFIDEIDAIGAKRLDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKLR-GVDLRLIAELTEGASGADLKAIATEAGMFAIRERRTYVTQEDF 370
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PRS7_XENLA (26S protease regulatory subunit 7 OS=Xenopus laevis GN=psmc2 PE=2 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.096e-41 Identity = 80/158 (50.63%), Postives = 111/158 (70.25%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 475 E R +LF +A ++F DEIDA+G R+D +GG+ E+QRTMLEL+NQLDGFD RG++KV++ATNR ++LDPAL+RPGR+DRKIEF LPD++ R IF+IH M++ D+ E +GA+I+++CTEAG+ A+R RR T DF Sbjct: 252 EGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDF 409
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PRS6B_SCHPO (26S protease regulatory subunit 6B homolog OS=Schizosaccharomyces pombe GN=rpt3 PE=2 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.096e-41 Identity = 85/158 (53.80%), Postives = 118/158 (74.68%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFP-LPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTD 472 E R D+FR+A + +P+I+FIDEIDA+ TKR+DA +G +RE+QR ++ELL Q+DGFD +VKVI+ATNR ++LDPALLRPGR+DRKIEFP D + RR +FQ T++M L+ +V+L+ F+M D SGA I AI +AGLLA+R+ R + +D Sbjct: 211 EGPRMVRDVFRMARENAPAIIFIDEIDAIATKRFDAQTGADREVQRILIELLTQMDGFDQGANVKVIMATNRADTLDPALLRPGRLDRKIEFPSYRDRRQRRLVFQTITAKMLLSPEVDLDTFIMRPDASSGAQIAAIMQDAGLLAVRKSRGVILQSD 368
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PSMR_METVS (Proteasome-activating nucleotidase OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=pan PE=3 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 2.737e-41 Identity = 84/151 (55.63%), Postives = 111/151 (73.51%), Query Frame = 2 Query: 23 DLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 475 D+F++A + SP I+FIDEIDAV +KR ++ +GG+RE+QRT+++LL ++DGFDSRGDVK+I ATNR + LDPA+LRPGR DR IE PD R IF+IHT +M + V+L E + GADIKA+CTEAG+ A+RE R VT DF Sbjct: 232 DVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEIAAPDEDGRLEIFKIHTDKMNI-KSVDLREIAKMAENMVGADIKAVCTEAGMFAIREGREYVTTKDF 381
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PRS8_XENLA (26S protease regulatory subunit 8 OS=Xenopus laevis GN=psmc5 PE=2 SV=2) HSP 1 Score: 168.703 bits (426), Expect = 2.737e-41 Identity = 86/158 (54.43%), Postives = 116/158 (73.42%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 475 E R +LF +A + +PSI+F+DEID++G+ R + SGG+ E+QRTMLELLNQLDGF++ ++KVI+ATNRI+ LD ALLRPGRIDRKIEFP P+ + R I +IH+ +M L +NL + SGA++K +CTEAG+ ALRERR+ VT DF Sbjct: 221 EGARMVRELFVMAREHAPSIIFMDEIDSIGS-RLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDF 377
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PRS8B_ARATH (26S protease regulatory subunit 8 homolog B OS=Arabidopsis thaliana GN=RPT6B PE=2 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 2.737e-41 Identity = 85/159 (53.46%), Postives = 120/159 (75.47%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSG-GEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 475 E R +LF +A + +PSI+F+DEID++G+ R ++ SG G+ E+QRTMLELLNQLDGF++ +KV++ATNRI+ LD ALLRPGRIDRKIEFP P+ ++R I +IH+ +M L ++L++ + SGA++KA+CTEAG+ ALRERR+ VT DF Sbjct: 238 EGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDF 396
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PRS8A_ARATH (26S protease regulatory subunit 8 homolog A OS=Arabidopsis thaliana GN=RPT6A PE=2 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 2.737e-41 Identity = 85/159 (53.46%), Postives = 120/159 (75.47%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSG-GEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 475 E R +LF +A + +PSI+F+DEID++G+ R ++ SG G+ E+QRTMLELLNQLDGF++ +KV++ATNRI+ LD ALLRPGRIDRKIEFP P+ ++R I +IH+ +M L ++L++ + SGA++KA+CTEAG+ ALRERR+ VT DF Sbjct: 238 EGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDF 396
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PRS7_RAT (26S protease regulatory subunit 7 OS=Rattus norvegicus GN=Psmc2 PE=1 SV=3) HSP 1 Score: 168.703 bits (426), Expect = 2.737e-41 Identity = 80/158 (50.63%), Postives = 111/158 (70.25%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 475 E R +LF +A ++F DEIDA+G R+D +GG+ E+QRTMLEL+NQLDGFD RG++KV++ATNR ++LDPAL+RPGR+DRKIEF LPD++ R IF+IH M++ D+ E +GA+I+++CTEAG+ A+R RR T DF Sbjct: 252 EGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDF 409
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PRS7_MOUSE (26S protease regulatory subunit 7 OS=Mus musculus GN=Psmc2 PE=1 SV=5) HSP 1 Score: 168.703 bits (426), Expect = 2.737e-41 Identity = 80/158 (50.63%), Postives = 111/158 (70.25%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 475 E R +LF +A ++F DEIDA+G R+D +GG+ E+QRTMLEL+NQLDGFD RG++KV++ATNR ++LDPAL+RPGR+DRKIEF LPD++ R IF+IH M++ D+ E +GA+I+++CTEAG+ A+R RR T DF Sbjct: 252 EGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDF 409 The following BLAST results are available for this feature:
BLAST of DC900289 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 353
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900289 ID=DC900289; Name=DC900289; organism=Citrus sinensis; type=EST; length=706bpback to top |