DC900289
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PRS7_MACFA (26S protease regulatory subunit 7 OS=Macaca fascicularis GN=PSMC2 PE=2 SV=3) HSP 1 Score: 168.703 bits (426), Expect = 2.737e-41 Identity = 80/158 (50.63%), Postives = 111/158 (70.25%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 475 E R +LF +A ++F DEIDA+G R+D +GG+ E+QRTMLEL+NQLDGFD RG++KV++ATNR ++LDPAL+RPGR+DRKIEF LPD++ R IF+IH M++ D+ E +GA+I+++CTEAG+ A+R RR T DF Sbjct: 252 EGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDF 409
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PRS7_HUMAN (26S protease regulatory subunit 7 OS=Homo sapiens GN=PSMC2 PE=1 SV=3) HSP 1 Score: 168.703 bits (426), Expect = 2.737e-41 Identity = 80/158 (50.63%), Postives = 111/158 (70.25%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 475 E R +LF +A ++F DEIDA+G R+D +GG+ E+QRTMLEL+NQLDGFD RG++KV++ATNR ++LDPAL+RPGR+DRKIEF LPD++ R IF+IH M++ D+ E +GA+I+++CTEAG+ A+R RR T DF Sbjct: 252 EGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDF 409
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PRS7_BOVIN (26S protease regulatory subunit 7 OS=Bos taurus GN=PSMC2 PE=2 SV=3) HSP 1 Score: 168.703 bits (426), Expect = 2.737e-41 Identity = 80/158 (50.63%), Postives = 111/158 (70.25%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 475 E R +LF +A ++F DEIDA+G R+D +GG+ E+QRTMLEL+NQLDGFD RG++KV++ATNR ++LDPAL+RPGR+DRKIEF LPD++ R IF+IH M++ D+ E +GA+I+++CTEAG+ A+R RR T DF Sbjct: 252 EGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDF 409
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PSMR_THEGJ (Proteasome-activating nucleotidase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=pan PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 3.574e-41 Identity = 86/158 (54.43%), Postives = 113/158 (71.52%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 475 E R +LF +A + +P+I+FIDEIDA+G KR D +GGERE+ RT+++LL ++DGFD RG+VKVI ATNR + LDPALLRPGR DR IE PLPD + R I ++HT +M L +V+L + SGAD+KAI TEAG+ A+R+RR VT DF Sbjct: 215 EGARLVHELFEMAKEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFRGRLEILKVHTRKMNLR-NVDLSIIADITEGASGADLKAIATEAGMFAIRDRRTYVTQEDF 371
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PRS8_NAEFO (26S protease regulatory subunit 8 homolog OS=Naegleria fowleri PE=2 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 3.574e-41 Identity = 86/151 (56.95%), Postives = 112/151 (74.17%), Query Frame = 2 Query: 23 DLFRVADDLSPSIVFIDEIDAVGTKRYDA-HSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTD 472 +LF +A + +PSI+F+DEID++G+ R + GG+ E+QRTMLELLNQLDGF+S ++K+I+ATNRI+ LDPALLRPGRIDRKIEFP P+ R I +IH+ RM L +NL + SGA+IKA CTEAG+ ALRERR+ VT D Sbjct: 240 ELFVMAREHAPSIIFMDEIDSIGSTRTEGGKGGGDSEVQRTMLELLNQLDGFESTQNIKIIMATNRIDILDPALLRPGRIDRKIEFPNPNELARLDILKIHSRRMNLTRGINLRKIASMLGGASGAEIKATCTEAGMFALRERRVHVTQED 390
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PSMR_SULIY (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=pan PE=3 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 4.668e-41 Identity = 85/157 (54.14%), Postives = 110/157 (70.06%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTD 472 E R +LF +A +PSI+FIDEIDA+G KR D + GEREIQRT+++LL +LDGF+ +VK+I ATNRI+ LDPALLRPGR DR IE PLPD + R IF I+ +M + D++NLE + FSGADIK +C EA +A+R+ R KVT D Sbjct: 211 EGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGTSGEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRDGRNKVTMKD 367
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PSMR_SULIN (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=pan PE=3 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 4.668e-41 Identity = 85/157 (54.14%), Postives = 110/157 (70.06%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTD 472 E R +LF +A +PSI+FIDEIDA+G KR D + GEREIQRT+++LL +LDGF+ +VK+I ATNRI+ LDPALLRPGR DR IE PLPD + R IF I+ +M + D++NLE + FSGADIK +C EA +A+R+ R KVT D Sbjct: 211 EGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGTSGEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRDGRNKVTMKD 367
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PSMR_SULIM (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=pan PE=3 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 4.668e-41 Identity = 85/157 (54.14%), Postives = 110/157 (70.06%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTD 472 E R +LF +A +PSI+FIDEIDA+G KR D + GEREIQRT+++LL +LDGF+ +VK+I ATNRI+ LDPALLRPGR DR IE PLPD + R IF I+ +M + D++NLE + FSGADIK +C EA +A+R+ R KVT D Sbjct: 211 EGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGTSGEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRDGRNKVTMKD 367
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PSMR_SULIL (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=pan PE=3 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 4.668e-41 Identity = 85/157 (54.14%), Postives = 110/157 (70.06%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTD 472 E R +LF +A +PSI+FIDEIDA+G KR D + GEREIQRT+++LL +LDGF+ +VK+I ATNRI+ LDPALLRPGR DR IE PLPD + R IF I+ +M + D++NLE + FSGADIK +C EA +A+R+ R KVT D Sbjct: 211 EGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGTSGEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRDGRNKVTMKD 367
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PSMR_SULIK (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=pan PE=3 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 4.668e-41 Identity = 85/157 (54.14%), Postives = 110/157 (70.06%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTD 472 E R +LF +A +PSI+FIDEIDA+G KR D + GEREIQRT+++LL +LDGF+ +VK+I ATNRI+ LDPALLRPGR DR IE PLPD + R IF I+ +M + D++NLE + FSGADIK +C EA +A+R+ R KVT D Sbjct: 211 EGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGTSGEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRDGRNKVTMKD 367 The following BLAST results are available for this feature:
BLAST of DC900289 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 353
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900289 ID=DC900289; Name=DC900289; organism=Citrus sinensis; type=EST; length=706bpback to top |