DC900280

Overview
NameDC900280
Unique NameDC900280
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length791
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900280 vs. ExPASy Swiss-Prot
Match: OXO1_HORVU (Oxalate oxidase 1 OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 5.256e-39
Identity = 90/195 (46.15%), Postives = 114/195 (58.46%), Query Frame = 2
Query:   62 SDPDPLQDICVADLDAP-ISINGFPCKPASEVXXXXXXXXXXXXXXXXXVFK-RAVTFGDVFGFPAVNTQGVSLFRIDLGVGGINPPHTHPRATEAGIVLKGRVLVGFV---TTNNTFFSKVLTPGMVFLIPRAHVHFQLNVGKGKATFVPIFNSQNPGVSDSVGTLFDTNPSVPNSVLTKSFLVSDDVINAIRS 631
            SDPDPLQD CVADLD   +S+NG  CKP SE                       AVT  DV  +P  NT GVS+ R+D   GG NPPH HPRATE G+V+KG +LVG +    + N  +S+V+  G  F+IPR  +HFQ NVGK +A  V  FNSQNPG+     TLF ++P +P  VLTK+  V   V+  ++S
Sbjct:    1 SDPDPLQDFCVADLDGKAVSVNGHTCKPMSEAGDDFLFSSKLTKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDFAPGGTNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGETFVIPRGLMHFQFNVGKTEAYMVVSFNSQNPGIVFVPLTLFGSDPPIPTPVLTKALRVEAGVVELLKS 195          
BLAST of DC900280 vs. ExPASy Swiss-Prot
Match: GL52_ORYSJ (Germin-like protein 5-1 OS=Oryza sativa subsp. japonica GN=Os05g0277500 PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.529e-38
Identity = 87/199 (43.72%), Postives = 111/199 (55.78%), Query Frame = 2
Query:   53 SHASDPDPLQDICVADLDAPISINGFPCKPASEVXXXXXXXXXXXXXXXXXVFKRAVTFGDVFGFPAVNTQGVSLFRIDLGVGGINPPHTHPRATEAGIVLKGRVLVGFVTTNNTFFSKVLTPGMVFLIPRAHVHFQLNVGKGKATFVPIFNSQNPGVSDSVGTLFDTNPSVPNSVLTKSFLVSDDVINAIRSARTSNK 649
            S A DPD LQDICVADL + + +NGF CK A+                    +   VT  +V   P +NT GVS+ RID   GG+NPPHTHPRATE   VL+G + VGF+TT N  ++K ++ G VF+ PR  +HFQ N G   A  +  FNSQ PG      TLF  +P VP+ VLTK+F V    +  I+S     K
Sbjct:   23 STAGDPDLLQDICVADLTSAVKVNGFACK-AAVTEDDFYFKGLAAAGNTNNTYGSVVTGANVEKLPGLNTLGVSMSRIDYAPGGLNPPHTHPRATEMVFVLQGTLDVGFITTANKLYTKTISAGDVFVFPRGLLHFQKNNGDTPAAVISAFNSQLPGTQSLAMTLFAASPEVPDGVLTKAFQVGTKEVEKIKSRLAPKK 220          
BLAST of DC900280 vs. ExPASy Swiss-Prot
Match: GL22_ARATH (Germin-like protein subfamily 2 member 2 OS=Arabidopsis thaliana GN=At1g02335 PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.997e-38
Identity = 86/198 (43.43%), Postives = 109/198 (55.05%), Query Frame = 2
Query:   59 ASDPDPLQDICVADLDAPISINGFPCKPASEVXXXXXXXXXXXXXXXXX-VFKRAVTFGDVFGFPAVNTQGVSLFRIDLGVGGINPPHTHPRATEAGIVLKGRVLVGFVTTNNTFFSKVLTPGMVFLIPRAHVHFQLNVGKGKATFVPIFNSQNPGVSDSVGTLFDTNPSVPNSVLTKSFLVSDDVINAIRSARTSNK 649
            A DPD LQD+CVAD      +NGFPCK    +                      AVT  +V   P +NT  VSL RID   GG+NPPHTHPRATE   VL+G + VGF+TT N  F+K +  G VF+ PR  VHFQ N GK  A+ +  FNSQ PG +    TLF   P++P  VLTK+F V   +++ I+    + K
Sbjct:   22 AYDPDALQDLCVADKSHGTKLNGFPCKETLNITESDFFFAGISKPAVINSTMGSAVTGANVEKIPGLNTLSVSLARIDYAPGGLNPPHTHPRATEVVYVLEGELEVGFITTANKLFTKTIKIGEVFVFPRGLVHFQKNNGKSPASVLSAFNSQLPGTASVAATLFAAEPALPEDVLTKTFQVGSKMVDKIKERLATKK 219          
BLAST of DC900280 vs. ExPASy Swiss-Prot
Match: RHRE_PEA (Rhicadhesin receptor OS=Pisum sativum GN=GER1 PE=1 SV=2)

HSP 1 Score: 157.532 bits (397), Expect = 7.590e-38
Identity = 86/192 (44.79%), Postives = 111/192 (57.81%), Query Frame = 2
Query:   59 ASDPDPLQDICVADLDAPISINGFPCKPASEVXXXXXXXXXXXXXXXXX-VFKRAVTFGDVFGFPAVNTQGVSLFRIDLGVGGINPPHTHPRATEAGIVLKGRVLVGFVTTNNTFFSKVLTPGMVFLIPRAHVHFQLNVGKGKATFVPIFNSQNPGVSDSVGTLFDTNPSVPNSVLTKSFLVSDDVINAIRS 631
            A+D D LQD+CVAD  + I +NGF CKPAS V                   F   VT  +V   P +NT GVS+ RID   GG+NPPHTHPRATE   VL+G++ VGF+TT N   +K +  G  F+ P+  VHFQ N G   AT +  FNSQ PG  +   TLF+  P VP++VLTK+F +    +  I+S
Sbjct:   20 AADADALQDLCVADYASVILVNGFACKPASNVTAEDFFSNLLVKQGATNNTFGSLVTGANVQRIPGLNTLGVSMARIDYAPGGLNPPHTHPRATEMVFVLEGQLDVGFITTTNQLIAKTIAKGETFVFPKGLVHFQKNNGWEPATVIAGFNSQLPGTVNIPLTLFNATPPVPDNVLTKAFQIGTKEVQKIKS 211          
BLAST of DC900280 vs. ExPASy Swiss-Prot
Match: NEC1_NICPL (Nectarin-1 OS=Nicotiana plumbaginifolia GN=NEC1 PE=1 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 9.913e-38
Identity = 86/191 (45.03%), Postives = 111/191 (58.12%), Query Frame = 2
Query:   59 ASDPDPLQDICVADLDAPISINGFPCKPASEVXXXXXXXXXXXXXXXXXVFKRAVTFGDVFGFPAVNTQGVSLFRIDLGVGGINPPHTHPRATEAGIVLKGRVLVGFVTTNNTFFSKVLTPGMVFLIPRAHVHFQLNVGKGKATFVPIFNSQNPGVSDSVGTLFDTNPSVPNSVLTKSFLVSDDVINAIRS 631
            A+D D LQD+CVADL + + +NGFPCK  +                    F   VT  +V   P +NT GVSL RID   GGINPPHTHPRA+E   V++G + VGF+TT N   SK +T G VF+ PR  VHFQ N GK  A  V  FNSQ PG      TLF  +P+VP+ VL ++F ++ + +  I+S
Sbjct:   32 AADEDMLQDVCVADLHSKVKVNGFPCK-TNFTAADFSSFAISKPGATNNKFGSKVTTANVEQVPGLNTLGVSLARIDYAPGGINPPHTHPRASEMVFVMEGELDVGFITTANVLVSKQITKGEVFVFPRGLVHFQKNNGKIPAAVVSAFNSQLPGTQSIPITLFGASPTVPDDVLAQTFQINIEDVQQIKS 221          
BLAST of DC900280 vs. ExPASy Swiss-Prot
Match: GER3_WHEAT (Oxalate oxidase GF-3.8 OS=Triticum aestivum PE=1 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 9.913e-38
Identity = 89/196 (45.41%), Postives = 114/196 (58.16%), Query Frame = 2
Query:   59 ASDPDPLQDICVADLDAP-ISINGFPCKPASEVXXXXXXXXXXXXXXXXXVFK-RAVTFGDVFGFPAVNTQGVSLFRIDLGVGGINPPHTHPRATEAGIVLKGRVLVGFV---TTNNTFFSKVLTPGMVFLIPRAHVHFQLNVGKGKATFVPIFNSQNPGVSDSVGTLFDTNPSVPNSVLTKSFLVSDDVINAIRS 631
            +S+P PLQD CVADLD   +S+NG  CKP SE                       AVT  +V  +P  NT GVS+ R+D   GG NPPH HPRATE GIV+KG +LVG +    + N  +S+V+  G  FLIPR  +HFQ NVGK +A+ V  FNSQ+P V     TLF +NP +P  VLTK+  V   V+  ++S
Sbjct:   23 SSNPHPLQDFCVADLDGKAVSVNGHMCKPMSEAGDDFLFSSKLAKAGNTSTPNGSAVTDLNVAEWPGTNTLGVSMNRVDFAPGGTNPPHIHPRATEIGIVMKGELLVGILGSLDSGNKLYSRVVRAGETFLIPRGLMHFQFNVGKTEASMVVFFNSQSPSVVFVPLTLFGSNPPIPKPVLTKALRVEAGVVELLKS 218          
BLAST of DC900280 vs. ExPASy Swiss-Prot
Match: GL84_ORYSJ (Germin-like protein 8-4 OS=Oryza sativa subsp. japonica GN=GER1 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 6.425e-37
Identity = 87/195 (44.62%), Postives = 113/195 (57.95%), Query Frame = 2
Query:   59 ASDPDPLQDICVADLDAPISINGFPCKPASEVXXXXXXXXXXXXXXXXXVFKRA--VTFGDVFGFPAVNTQGVSLFRIDLGVGGINPPHTHPRATEAGIVLKGRVLVGFVTTN-NTFFSKVLTPGMVFLIPRAHVHFQLNVGKGK-ATFVPIFNSQNPGVSDSVGTLFDTNPSVPNSVLTKSFLVSDDVINAIRS 631
            A DP PLQD CVAD+ +P+ +NGFPCK   EV                 + K    VT  +V  FP +NT G+SL RID    G+NPPH HPRATE   VL+G + VGFVT+N N  FSKV+  G  F+ P+A +HFQ+N+   K A      NSQNPGV      +F + P + + VLTK+F V   VI+ ++S
Sbjct:   23 AFDPSPLQDFCVADMKSPVRVNGFPCKNPMEVNSDDFFNAAKFDMPRSTMNKVGSNVTNLNVLNFPGLNTLGISLARIDYAPLGVNPPHIHPRATELLTVLEGTLYVGFVTSNPNRLFSKVVHKGDTFVFPKAMIHFQMNLDHNKPAVAQSSLNSQNPGVITIASAVFGSKPPISDDVLTKAFQVEKKVIDWLKS 217          
BLAST of DC900280 vs. ExPASy Swiss-Prot
Match: GL37_ORYSJ (Germin-like protein 3-7 OS=Oryza sativa subsp. japonica GN=GER7 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 6.425e-37
Identity = 84/196 (42.86%), Postives = 116/196 (59.18%), Query Frame = 2
Query:   59 ASDPDPLQDICVA----DLDAPISINGFPCKPASEVXXXXXXXXXXXXXXXXX-VFKRAVTFGDVFGFPAVNTQGVSLFRIDLGVGGINPPHTHPRATEAGIVLKGRVLVGFVTTNNTFFSKVLTPGMVFLIPRAHVHFQLNVGKGKATFVPIFNSQNPGVSDSVGTLFDTNPSVPNSVLTKSFLVSDDVINAIRS 631
            A+DP+P+QD CVA      +A  +  GFPCKPAS V                   F  ++  G+V  FPA+NT GV++ R+DL  GG+NP H+HPRA E   V+ GR+LVGFV+T   ++SKV+  G  F IPR  +HFQ N G   A  + +FNSQ PGV  +   LF  +P +P++VL KSF V  ++I  ++S
Sbjct:   34 AADPEPIQDFCVAVPRAGGEASPAYPGFPCKPASAVVSDDFFFAGLAAAGSTDNPFGASLKPGNVEAFPALNTLGVAINRVDLAPGGVNPLHSHPRAAELVHVITGRMLVGFVSTAGKYYSKVVGEGETFAIPRGLMHFQYNPGNASARAMTVFNSQLPGVVPAATALFGADPEIPDAVLAKSFQVDAEIIKLLKS 229          
BLAST of DC900280 vs. ExPASy Swiss-Prot
Match: GL24_ARATH (Germin-like protein subfamily 2 member 4 OS=Arabidopsis thaliana GN=GLP10 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 6.425e-37
Identity = 85/193 (44.04%), Postives = 108/193 (55.96%), Query Frame = 2
Query:   59 ASDPDPLQDICVADLDAPISINGFPCKPASEVXXXXXXXXXXXXXXXXX-VFKRAVTFGDVFGFPAVNTQGVSLFRIDLGVGGINPPHTHPRATEAGIVLKGRVLVGFVTTNNTFFSKVLTPGMVFLIPRAHVHFQLNVGKGK-ATFVPIFNSQNPGVSDSVGTLFDTNPSVPNSVLTKSFLVSDDVINAIRS 631
            A DPD LQD+CVAD  + I +NGF CKP S +                      AVT  +V     +NT GVSL RID   GG+NPPHTHPRATE   VL+G + VGF+TT N  F+K +  G VF+ PR  +H+Q N  K K A+ +  FNSQ PG      TLF   P++P+ VLT +F +    I  I+S
Sbjct:   21 AYDPDTLQDLCVADRTSGIKVNGFTCKPESNITASDFFFAGIGKPAVVNNTVGSAVTGANVEKIAGLNTLGVSLARIDYAPGGLNPPHTHPRATEVIFVLEGELDVGFITTANKLFAKTVKKGEVFVFPRGLIHYQKNNDKAKPASVISAFNSQLPGTQSIAATLFTATPAIPDHVLTTTFQIGTKEIEKIKS 213          
BLAST of DC900280 vs. ExPASy Swiss-Prot
Match: NEC1_NICLS (Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana sanderae GN=NECI PE=1 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.096e-36
Identity = 83/191 (43.46%), Postives = 109/191 (57.07%), Query Frame = 2
Query:   59 ASDPDPLQDICVADLDAPISINGFPCKPASEVXXXXXXXXXXXXXXXXXVFKRAVTFGDVFGFPAVNTQGVSLFRIDLGVGGINPPHTHPRATEAGIVLKGRVLVGFVTTNNTFFSKVLTPGMVFLIPRAHVHFQLNVGKGKATFVPIFNSQNPGVSDSVGTLFDTNPSVPNSVLTKSFLVSDDVINAIRS 631
            A+D D LQD+CVADL + + +NGFPCK  +                    F   VT  +V   P +NT GVSL RID   GGINPPHTHPRA+E   V++G + VGF+TT N   SK +  G VF+ PR  VHFQ N G+  A  +  FNSQ PG      TLF  +P VP+ VL ++F ++ + +  I+S
Sbjct:   32 AADEDMLQDVCVADLHSKVKVNGFPCK-TNFTAADFSSLAISKPGATNNKFGSVVTTANVEQVPGLNTLGVSLARIDYAPGGINPPHTHPRASEMVFVMEGELDVGFITTANVLVSKKIIKGEVFVFPRGLVHFQKNNGEVPAAVISAFNSQLPGTQSIPITLFGASPPVPDDVLAQTFQINTEDVQQIKS 221          
The following BLAST results are available for this feature:
BLAST of DC900280 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
OXO1_HORVU5.256e-3946.15Oxalate oxidase 1 OS=Hordeum vulgare PE=1 SV=1[more]
GL52_ORYSJ1.529e-3843.72Germin-like protein 5-1 OS=Oryza sativa subsp. jap... [more]
GL22_ARATH1.997e-3843.43Germin-like protein subfamily 2 member 2 OS=Arabid... [more]
RHRE_PEA7.590e-3844.79Rhicadhesin receptor OS=Pisum sativum GN=GER1 PE=1... [more]
NEC1_NICPL9.913e-3845.03Nectarin-1 OS=Nicotiana plumbaginifolia GN=NEC1 PE... [more]
GER3_WHEAT9.913e-3845.41Oxalate oxidase GF-3.8 OS=Triticum aestivum PE=1 S... [more]
GL84_ORYSJ6.425e-3744.62Germin-like protein 8-4 OS=Oryza sativa subsp. jap... [more]
GL37_ORYSJ6.425e-3742.86Germin-like protein 3-7 OS=Oryza sativa subsp. jap... [more]
GL24_ARATH6.425e-3744.04Germin-like protein subfamily 2 member 4 OS=Arabid... [more]
NEC1_NICLS1.096e-3643.46Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana s... [more]

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Properties
Property NameValue
Genbank descriptionDC900280 VSS Citrus sinensis cDNA clone VS28627 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900280 ID=DC900280; Name=DC900280; organism=Citrus sinensis; type=EST; length=791bp
ATCAATGTCACTCTTCGGGCTGCTACTAGTGTTAGTGATTCTACCCTTCC
CTTCCCACGCAAGTGACCCTGATCCCTTACAAGACATCTGTGTTGCGGAT
TTGGATGCCCCCATCTCGATCAATGGTTTCCCGTGCAAGCCTGCTTCGGA
AGTGACTTCTGATGATTTCTTCACGGATTTTTCCAAGGATCCGACGACAT
TCGATGTCTTTAAGCGTGCAGTTACATTTGGTGATGTGTTTGGCTTTCCA
GCGGTCAACACTCAAGGAGTTTCACTCTTCCGAATTGACCTGGGTGTCGG
CGGAATAAATCCGCCTCACACGCATCCTCGCGCAACTGAGGCTGGTATTG
TTCTTAAAGGGAGGGTGCTTGTGGGATTTGTAACAACTAATAATACCTTT
TTCTCAAAGGTTTTGACTCCCGGGATGGTGTTCTTAATTCCTAGAGCACA
TGTCCATTTCCAATTAAACGTTGGAAAAGGAAAGGCTACTTTCGTGCCCA
TTTTCAACAGTCAAAATCCCGGCGTTTCGGATTCAGTCGGTACTCTGTTT
GATACTAATCCCTCAGTTCCCAATAGTGTGTTGACCAAATCTTTCCTAGT
AAGTGATGATGTGATCAATGCCATCAGATCGGCTCGAACGTCAAATAAGT
CTGGCCATCAATTCAACACCCGGTCTAGCTATTAGCATTCTCCATGCTTG
ATCGATATCTTTTATTGTCTCAAAATTGTTAGATTTATTTTATCTAGCAA
TTGTTAAATAAAATTACAGCTGAGGCAATATATAACTATCG
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