DC900270
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU1_SOYBN (Elongation factor Tu, chloroplastic OS=Glycine max GN=TUFA PE=3 SV=1) HSP 1 Score: 294.278 bits (752), Expect = 6.223e-79 Identity = 146/158 (92.41%), Postives = 153/158 (96.84%), Query Frame = 3 Query: 3 TVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 TVDLVGL+ETRN TVTGVEMFQK LDEA+AGDNVGLLLRGVQK DIQRGMVLAKPGTITPHTKF AIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTG+V+SIMNDKDEES MV+PGDR+KMVVELI+PVACEQGMRFAIREGGKTVGAGVIQSIIE Sbjct: 322 TVDLVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQKTDIQRGMVLAKPGTITPHTKFSAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTSIMNDKDEESTMVLPGDRVKMVVELIVPVACEQGMRFAIREGGKTVGAGVIQSIIE 479
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU2_SOYBN (Elongation factor Tu, chloroplastic OS=Glycine max GN=TUFB1 PE=3 SV=1) HSP 1 Score: 291.582 bits (745), Expect = 4.033e-78 Identity = 142/158 (89.87%), Postives = 153/158 (96.84%), Query Frame = 3 Query: 3 TVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 TVD+VG+K+TRN TVTGVEMFQK LDEA+AGDNVGLLLRG+QK DIQRGMVLAKPGTITPHTKF AIVYVLKKEEGGRHSPFF+GYRPQFYMRTTDVTG+V+ IMNDKDEESKMVMPGDR+K+VVELI+PVACEQGMRFAIREGGKTVGAGVIQSIIE Sbjct: 322 TVDIVGVKDTRNTTVTGVEMFQKILDEALAGDNVGLLLRGIQKTDIQRGMVLAKPGTITPHTKFSAIVYVLKKEEGGRHSPFFSGYRPQFYMRTTDVTGKVTEIMNDKDEESKMVMPGDRVKLVVELIVPVACEQGMRFAIREGGKTVGAGVIQSIIE 479
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_ARATH (Elongation factor Tu, chloroplastic OS=Arabidopsis thaliana GN=TUFA PE=1 SV=1) HSP 1 Score: 288.886 bits (738), Expect = 2.614e-77 Identity = 140/158 (88.61%), Postives = 154/158 (97.47%), Query Frame = 3 Query: 3 TVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 TVDLVGL+ETR++TVTGVEMFQK LDEA+AGDNVGLLLRG+QKADIQRGMVLAKPG+ITPHTKF AI+YVLKKEEGGRHSPFFAGYRPQFYMRTTDVTG+V+ IMNDKDEESKMVMPGDR+K+VVELI+PVACEQGMRFAIREGGKTVGAGVI +I+E Sbjct: 319 TVDLVGLRETRSYTVTGVEMFQKILDEALAGDNVGLLLRGIQKADIQRGMVLAKPGSITPHTKFEAIIYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTKIMNDKDEESKMVMPGDRVKIVVELIVPVACEQGMRFAIREGGKTVGAGVIGTILE 476
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTUB_NICSY (Elongation factor TuB, chloroplastic OS=Nicotiana sylvestris GN=TUFB PE=2 SV=1) HSP 1 Score: 284.648 bits (727), Expect = 4.930e-76 Identity = 140/157 (89.17%), Postives = 149/157 (94.90%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 VD+VGLK+TRN TVTGVEMFQK LDEAMAGDNVGLLLRG+QK DIQRGMVLAKPGTITPHTKF A+VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTG+V+ IM+DK EESKMVMPGDR+ MVVELIMPVACEQGMRFAIREGGKTVGAGVIQ I+E Sbjct: 329 VDIVGLKDTRNTTVTGVEMFQKILDEAMAGDNVGLLLRGIQKIDIQRGMVLAKPGTITPHTKFEALVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTVIMSDKGEESKMVMPGDRVNMVVELIMPVACEQGMRFAIREGGKTVGAGVIQKILE 485
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_PEA (Elongation factor Tu, chloroplastic OS=Pisum sativum GN=tufA PE=2 SV=1) HSP 1 Score: 284.263 bits (726), Expect = 6.439e-76 Identity = 141/157 (89.81%), Postives = 151/157 (96.18%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 VDLVGL+ETRN TVTGVEMFQK LD+AMAGDNVGLLLRG+QK DIQRGMVLAKPGTITPH+KF AIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTG+V+SIMNDKDEESKMVMPGDR+K+VVELI+PVA EQGMRFAIREGGKTVGAGVI +IIE Sbjct: 332 VDLVGLRETRNTTVTGVEMFQKILDDAMAGDNVGLLLRGIQKIDIQRGMVLAKPGTITPHSKFSAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTSIMNDKDEESKMVMPGDRVKIVVELIVPVAIEQGMRFAIREGGKTVGAGVIGAIIE 488
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_TOBAC (Elongation factor Tu, chloroplastic OS=Nicotiana tabacum GN=TUFA PE=3 SV=1) HSP 1 Score: 283.493 bits (724), Expect = 1.098e-75 Identity = 140/158 (88.61%), Postives = 149/158 (94.30%), Query Frame = 3 Query: 3 TVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 TVD+VGLK+TR+ TVTGVEMFQK LDEAMAGDNVGLLLRG+QK DIQRGMVLAKPGTITPHTKF AIVYVLKKEEGGRHSPFF+GYRPQFYMRTTDVTG+V+SI DK EESKMVMPGDR+ +VVELIMPVACEQGMRFAIREGGKTVGAGVIQ IIE Sbjct: 321 TVDIVGLKDTRSTTVTGVEMFQKILDEAMAGDNVGLLLRGIQKIDIQRGMVLAKPGTITPHTKFEAIVYVLKKEEGGRHSPFFSGYRPQFYMRTTDVTGKVTSITTDKGEESKMVMPGDRVNLVVELIMPVACEQGMRFAIREGGKTVGAGVIQKIIE 478
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTUA_NICSY (Elongation factor TuA, chloroplastic OS=Nicotiana sylvestris GN=TUFA PE=2 SV=2) HSP 1 Score: 283.493 bits (724), Expect = 1.098e-75 Identity = 140/158 (88.61%), Postives = 149/158 (94.30%), Query Frame = 3 Query: 3 TVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 TVD+VGLK+TR+ TVTGVEMFQK LDEAMAGDNVGLLLRG+QK DIQRGMVLAKPGTITPHTKF AIVYVLKKEEGGRHSPFF+GYRPQFYMRTTDVTG+V+SI DK EESKMVMPGDR+ +VVELIMPVACEQGMRFAIREGGKTVGAGVIQ IIE Sbjct: 321 TVDIVGLKDTRSTTVTGVEMFQKILDEAMAGDNVGLLLRGIQKIDIQRGMVLAKPGTITPHTKFEAIVYVLKKEEGGRHSPFFSGYRPQFYMRTTDVTGKVTSITTDKGEESKMVMPGDRVNLVVELIMPVACEQGMRFAIREGGKTVGAGVIQKIIE 478
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_LEPTE (Elongation factor Tu, chloroplastic OS=Leptosira terrestris GN=tufA PE=3 SV=1) HSP 1 Score: 245.743 bits (626), Expect = 2.538e-64 Identity = 113/157 (71.97%), Postives = 141/157 (89.81%), Query Frame = 3 Query: 3 TVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 473 T+++VGL+ETR TVTG+EMFQKTL+E++AGDNVG+LLRG+QK DIQRGMVLAKPG+ITPHTKF A VY+L ++EGGRH+PFFAGYRPQFY+RTTDVTG++ + D D+ ++MVMPGDRIKM VELI P+A E+GMRFAIREGG+TVGAGV+ +I+ Sbjct: 252 TIEIVGLRETRTTTVTGLEMFQKTLEESVAGDNVGVLLRGIQKIDIQRGMVLAKPGSITPHTKFTAQVYILTRDEGGRHTPFFAGYRPQFYVRTTDVTGKIETFRTDDDQPTQMVMPGDRIKMEVELIQPIAIEKGMRFAIREGGRTVGAGVVSAIV 408
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_ACAM1 (Elongation factor Tu OS=Acaryochloris marina (strain MBIC 11017) GN=tuf PE=3 SV=1) HSP 1 Score: 244.973 bits (624), Expect = 4.329e-64 Identity = 117/158 (74.05%), Postives = 139/158 (87.97%), Query Frame = 3 Query: 3 TVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 TV+LVG+++TR+ TVTGVEMFQKTLDE MAGDNVGLLLRGVQK DI+RGMVLAKPG+ITPHT+F + VY+LKK+EGGRH+PFF GYRPQFY+RTTDVTG +S+ D ++MVMPGDRIKM VELI P+A EQGMRFAIREGG+TVGAGV+ I++ Sbjct: 252 TVELVGIRDTRSTTVTGVEMFQKTLDEGMAGDNVGLLLRGVQKEDIERGMVLAKPGSITPHTQFESEVYILKKDEGGRHTPFFPGYRPQFYVRTTDVTGTISAFTADDGSAAEMVMPGDRIKMTVELINPIAIEQGMRFAIREGGRTVGAGVVSKILK 409
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_SYNP6 (Elongation factor Tu OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=tuf PE=3 SV=1) HSP 1 Score: 244.588 bits (623), Expect = 5.654e-64 Identity = 115/158 (72.78%), Postives = 138/158 (87.34%), Query Frame = 3 Query: 3 TVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 T+++VGL++TR+ TVTGVEMFQKTLDE +AGDNVGLLLRG+QK DI+RGMVLAKPG+ITPHTKF + VYVLKKEEGGRH+PFF GYRPQFY+RTTDVTG +S D ++MV+PGDRIKM VELI P+A EQGMRFAIREGG+T+GAGV+ I++ Sbjct: 252 TIEIVGLRDTRSTTVTGVEMFQKTLDEGLAGDNVGLLLRGIQKTDIERGMVLAKPGSITPHTKFESEVYVLKKEEGGRHTPFFPGYRPQFYVRTTDVTGAISDFTADDGSAAEMVIPGDRIKMTVELINPIAIEQGMRFAIREGGRTIGAGVVSKILQ 409 The following BLAST results are available for this feature:
BLAST of DC900270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900270 ID=DC900270; Name=DC900270; organism=Citrus sinensis; type=EST; length=885bpback to top |