DC900270
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_CYAA5 (Elongation factor Tu OS=Cyanothece sp. (strain ATCC 51142) GN=tuf PE=3 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 7.642e-61 Identity = 110/158 (69.62%), Postives = 133/158 (84.18%), Query Frame = 3 Query: 3 TVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 T+++VG+++TR+ TVTGVEMFQKTLDE MAGDNVGLLLRG++K DI+RGMV+AKPG+ITPHT+F VYVL KEEGGRH+PFF YRPQFY+RTTDVTG + D +MVMPGDRIKM VELI P+A EQGMRFAIREGG+T+GAGV+ I++ Sbjct: 252 TIEIVGIRDTRSTTVTGVEMFQKTLDEGMAGDNVGLLLRGIKKEDIERGMVIAKPGSITPHTQFEGEVYVLTKEEGGRHTPFFKNYRPQFYVRTTDVTGTIQDYTADDGSAVEMVMPGDRIKMTVELISPIAIEQGMRFAIREGGRTIGAGVVSKILK 409
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_ANASP (Elongation factor Tu OS=Anabaena sp. (strain PCC 7120) GN=tuf PE=1 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 7.642e-61 Identity = 109/157 (69.43%), Postives = 137/157 (87.26%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 V+LVG+++TRN TVTG+EMF+K+LDE MAGDN G+LLRG+QKADI+RGMVLAKPG+ITPHT+F VYVL ++EGGR +PFFAGYRPQFY+RTTDVTG + + +D+ E +MVMPGDRIK+ VELI P+A EQGMRFAIREGG+T+GAGV+ I++ Sbjct: 253 VELVGIRDTRNTTVTGIEMFKKSLDEGMAGDNAGVLLRGIQKADIERGMVLAKPGSITPHTQFEGEVYVLTEKEGGRKTPFFAGYRPQFYVRTTDVTGTIKAFTSDEGETVEMVMPGDRIKVTVELINPIAIEQGMRFAIREGGRTIGAGVVSKIVK 409
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_PROM2 (Elongation factor Tu OS=Prochlorococcus marinus (strain MIT 9215) GN=tuf PE=3 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 9.981e-61 Identity = 113/157 (71.97%), Postives = 134/157 (85.35%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 V++VG+++TR TVTGVEMF+K LDE MAGDNVGLLLRGVQK DI+RGMVL K G+ITPHT+F VYVLKKEEGGRH+PFFAGYRPQFY+RTTDVTG++++ +D +MVMPGDRIKM ELI PVA EQGMRFAIREGG+T+GAGV+ II+ Sbjct: 243 VEIVGIRDTRLTTVTGVEMFRKLLDEGMAGDNVGLLLRGVQKEDIERGMVLVKKGSITPHTQFEGEVYVLKKEEGGRHTPFFAGYRPQFYIRTTDVTGQITAFTSDDGSNVEMVMPGDRIKMTGELICPVAIEQGMRFAIREGGRTIGAGVVSKIIK 399
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_RHDSA (Elongation factor Tu, chloroplastic OS=Rhodomonas salina GN=tufA PE=3 SV=1) HSP 1 Score: 233.032 bits (593), Expect = 1.702e-60 Identity = 107/158 (67.72%), Postives = 134/158 (84.81%), Query Frame = 3 Query: 3 TVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 T++++GL+ETR T+TG+EMFQK+L+EA+AGDNVG+L+RG+QK DI+RGMVLA PG+ITPHTKF VYVL KEEGGRH+PFF GYRPQFY+RTTDVTG ++ D ++MVMPGDRIKM +LI P+A E+GMRFAIREGG+TVGAGV+ I+E Sbjct: 252 TIEIIGLRETRTTTITGLEMFQKSLEEALAGDNVGILVRGIQKTDIERGMVLAAPGSITPHTKFEGEVYVLTKEEGGRHTPFFTGYRPQFYVRTTDVTGTIAQFTADDGSAAEMVMPGDRIKMTAQLIHPIAIEKGMRFAIREGGRTVGAGVVSKILE 409
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_PROMS (Elongation factor Tu OS=Prochlorococcus marinus (strain AS9601) GN=tuf PE=3 SV=1) HSP 1 Score: 233.032 bits (593), Expect = 1.702e-60 Identity = 112/157 (71.34%), Postives = 134/157 (85.35%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 V++VG+++TR TVTGVEMF+K LDE MAGDNVGLLLRGVQK DI+RGMVL K G+ITPHT+F VYVLKKEEGGRH+PFFAGYRPQFY+RTTDVTG++++ +D +MVMPGDRIKM ELI PVA EQGMRFAIREGG+T+GAGV+ I++ Sbjct: 243 VEIVGIRDTRVTTVTGVEMFRKLLDEGMAGDNVGLLLRGVQKEDIERGMVLVKKGSITPHTQFEGEVYVLKKEEGGRHTPFFAGYRPQFYIRTTDVTGQITAFTSDDGSNVEMVMPGDRIKMTGELICPVAIEQGMRFAIREGGRTIGAGVVSKILK 399
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_PROM9 (Elongation factor Tu OS=Prochlorococcus marinus (strain MIT 9312) GN=tuf PE=3 SV=1) HSP 1 Score: 233.032 bits (593), Expect = 1.702e-60 Identity = 112/157 (71.34%), Postives = 134/157 (85.35%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 V++VG+++TR TVTGVEMF+K LDE MAGDNVGLLLRGVQK DI+RGMVL K G+ITPHT+F VYVLKKEEGGRH+PFFAGYRPQFY+RTTDVTG++++ +D +MVMPGDRIKM ELI PVA EQGMRFAIREGG+T+GAGV+ I++ Sbjct: 243 VEIVGIRDTRLTTVTGVEMFRKLLDEGMAGDNVGLLLRGVQKEDIERGMVLVKKGSITPHTQFEGEVYVLKKEEGGRHTPFFAGYRPQFYIRTTDVTGQITAFTSDDGSNVEMVMPGDRIKMTGELICPVAIEQGMRFAIREGGRTIGAGVVSKILK 399
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_PROM0 (Elongation factor Tu OS=Prochlorococcus marinus (strain MIT 9301) GN=tuf PE=3 SV=1) HSP 1 Score: 233.032 bits (593), Expect = 1.702e-60 Identity = 112/157 (71.34%), Postives = 134/157 (85.35%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 V++VG+++TR TVTGVEMF+K LDE MAGDNVGLLLRGVQK DI+RGMVL K G+ITPHT+F VYVLKKEEGGRH+PFFAGYRPQFY+RTTDVTG++++ +D +MVMPGDRIKM ELI PVA EQGMRFAIREGG+T+GAGV+ I++ Sbjct: 243 VEIVGIRDTRLTTVTGVEMFRKLLDEGMAGDNVGLLLRGVQKEDIERGMVLVKKGSITPHTQFEGEVYVLKKEEGGRHTPFFAGYRPQFYIRTTDVTGQITAFTSDDGSNVEMVMPGDRIKMTGELICPVAIEQGMRFAIREGGRTIGAGVVSKILK 399
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_SYNPX (Elongation factor Tu OS=Synechococcus sp. (strain WH8102) GN=tuf PE=3 SV=1) HSP 1 Score: 232.646 bits (592), Expect = 2.223e-60 Identity = 111/157 (70.70%), Postives = 131/157 (83.44%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 +++VG+K+ R TVTGVEMF+K L+E MAGDN GLLLRG+QK DI+RGMVL KPG+ITPHTKF VYVLKKEEGGRH+PFFAGYRPQFY+RTTDVTG++++ D +MVMPGDRIKM ELI PVA E GMRFAIREGG+T+GAGV+ IIE Sbjct: 243 IEIVGIKDARKTTVTGVEMFRKLLEEGMAGDNCGLLLRGIQKEDIERGMVLVKPGSITPHTKFEGEVYVLKKEEGGRHTPFFAGYRPQFYIRTTDVTGQITAFTADDGSAVEMVMPGDRIKMTGELICPVAMENGMRFAIREGGRTIGAGVVSKIIE 399
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_ANAVT (Elongation factor Tu OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=tuf PE=3 SV=1) HSP 1 Score: 232.646 bits (592), Expect = 2.223e-60 Identity = 108/157 (68.79%), Postives = 136/157 (86.62%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 V+LVG+++TRN TVTG+EMF+K+LDE MAGDN G+LLRG+QK DI+RGMVLAKPG+ITPHT+F VYVL ++EGGR +PFFAGYRPQFY+RTTDVTG + + +D+ E +MVMPGDRIK+ VELI P+A EQGMRFAIREGG+T+GAGV+ I++ Sbjct: 253 VELVGIRDTRNTTVTGIEMFKKSLDEGMAGDNAGVLLRGIQKTDIERGMVLAKPGSITPHTQFEGEVYVLTEKEGGRKTPFFAGYRPQFYVRTTDVTGTIKAFTSDEGEAVEMVMPGDRIKVTVELINPIAIEQGMRFAIREGGRTIGAGVVSKIVK 409
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_PROMA (Elongation factor Tu OS=Prochlorococcus marinus GN=tuf PE=3 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 2.904e-60 Identity = 112/157 (71.34%), Postives = 133/157 (84.71%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 V++VG+++TR TVTGVEMF+K LDE MAGDNVGLLLRG+QK DI+RGMVL K G+ITPHT+F VYVLKKEEGGRH+PFFAGYRPQFY+RTTDVTG++++ D +MVMPGDRIKM ELI PVA EQGMRFAIREGG+T+GAGV+ II+ Sbjct: 243 VEIVGIRDTRLTTVTGVEMFRKLLDEGMAGDNVGLLLRGIQKEDIERGMVLVKKGSITPHTQFEGEVYVLKKEEGGRHTPFFAGYRPQFYIRTTDVTGQITAFTADDGSSVEMVMPGDRIKMTGELICPVAIEQGMRFAIREGGRTIGAGVVSKIIK 399 The following BLAST results are available for this feature:
BLAST of DC900270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900270 ID=DC900270; Name=DC900270; organism=Citrus sinensis; type=EST; length=885bpback to top |