DC900270
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU2_RHOFD (Elongation factor Tu 2 OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=tuf2 PE=3 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 2.724e-50 Identity = 92/156 (58.97%), Postives = 120/156 (76.92%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 473 +++VG+ +T+ T TGVEMF+K LD+ AGDNVG+LLRG ++ D+QRG VL KPG+I PHT F +YVL K+EGGRH+PFF YRPQFY RTTDVTG + + E +MVMPGD + ++V+LI P+A E+G+RFAIREGGKTVGAGV+ +I Sbjct: 245 IEIVGIHDTQKTTCTGVEMFRKLLDQGQAGDNVGILLRGTKREDVQRGQVLCKPGSIKPHTHFTGEIYVLSKDEGGRHTPFFNNYRPQFYFRTTDVTGAI-----ELPEGKEMVMPGDNVSIIVKLINPIAMEEGLRFAIREGGKTVGAGVVAKVI 395
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU2_PHOLL (Elongation factor Tu 2 OS=Photorhabdus luminescens subsp. laumondii GN=tuf2 PE=3 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 2.724e-50 Identity = 96/156 (61.54%), Postives = 122/156 (78.21%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 473 V++VG+K+T T TGVEMF+K LDE AG+NVG+LLRG ++ +I+RG VLAKPG+I PHT F + VY+L K+EGGRH+PFF GYRPQFY RTTDVTG + + E +MVMPGD I+M V LI P+A +QG+RFAIREGG+TVGAGV+ +I Sbjct: 243 VEIVGIKDTTKTTCTGVEMFRKLLDEGRAGENVGVLLRGTKRDEIERGQVLAKPGSIKPHTTFESEVYILSKDEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIQMKVTLIAPIAMDQGLRFAIREGGRTVGAGVVAKVI 393
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU2_BARBK (Elongation factor Tu 2 OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=tuf2 PE=3 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 2.724e-50 Identity = 94/157 (59.87%), Postives = 121/157 (77.07%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 +++VG++ T TVTGVEMF+K LD+ AGDN+G LLRG+ + I+RG VLAKPG++TPHTKF A Y+L K+EGGRH+PFF YRPQFY RTTDVTG V+ E ++MVMPGD + M V LI+P+A E+ +RFAIREGG+TVGAG++ IIE Sbjct: 240 IEIVGIRPTSKTTVTGVEMFRKLLDQGQAGDNIGALLRGIDREGIERGQVLAKPGSVTPHTKFKAEAYILTKDEGGRHTPFFTNYRPQFYFRTTDVTGIVT-----LPEGTEMVMPGDNVAMDVSLIVPIAMEEKLRFAIREGGRTVGAGIVSKIIE 391
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU1_PHOLL (Elongation factor Tu 1 OS=Photorhabdus luminescens subsp. laumondii GN=tuf1 PE=3 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 2.724e-50 Identity = 96/156 (61.54%), Postives = 122/156 (78.21%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 473 V++VG+K+T T TGVEMF+K LDE AG+NVG+LLRG ++ +I+RG VLAKPG+I PHT F + VY+L K+EGGRH+PFF GYRPQFY RTTDVTG + + E +MVMPGD I+M V LI P+A +QG+RFAIREGG+TVGAGV+ +I Sbjct: 243 VEIVGIKDTTKTTCTGVEMFRKLLDEGRAGENVGVLLRGTKRDEIERGQVLAKPGSIKPHTTFESEVYILSKDEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIQMKVTLIAPIAMDQGLRFAIREGGRTVGAGVVAKVI 393
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU1_BARBK (Elongation factor Tu 1 OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=tuf1 PE=3 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 2.724e-50 Identity = 94/157 (59.87%), Postives = 121/157 (77.07%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 +++VG++ T TVTGVEMF+K LD+ AGDN+G LLRG+ + I+RG VLAKPG++TPHTKF A Y+L K+EGGRH+PFF YRPQFY RTTDVTG V+ E ++MVMPGD + M V LI+P+A E+ +RFAIREGG+TVGAG++ IIE Sbjct: 240 IEIVGIRPTSKTTVTGVEMFRKLLDQGQAGDNIGALLRGIDREGIERGQVLAKPGSVTPHTKFKAEAYILTKDEGGRHTPFFTNYRPQFYFRTTDVTGIVT-----LPEGTEMVMPGDNVAMDVSLIVPIAMEEKLRFAIREGGRTVGAGIVSKIIE 391
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_SHESH (Elongation factor Tu OS=Shewanella sediminis (strain HAW-EB3) GN=tuf PE=3 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 3.558e-50 Identity = 94/156 (60.26%), Postives = 120/156 (76.92%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 473 V++VG+K+T T TGVEMF+K LDE AG+N G+LLRG ++ D++RG VLA PG+ITPHT F + +YVL KEEGGRH+PFF GYRPQFY RTTDVTG + + E +MVMPGD + M V LI P+A ++G+RFAIREGG+TVGAGV+ I+ Sbjct: 243 VEIVGIKDTTKTTCTGVEMFRKLLDEGRAGENCGVLLRGTKREDVERGQVLAAPGSITPHTTFKSEIYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNVAMTVTLICPIAMDEGLRFAIREGGRTVGAGVVAEIV 393
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_SHEDO (Elongation factor Tu OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=tuf PE=3 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 3.558e-50 Identity = 98/156 (62.82%), Postives = 119/156 (76.28%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 473 V++VG+K T T TGVEMF+K LDE AG+N G+LLRG ++ D++RG VLAKP +I PHT F + VYVL KEEGGRH+PFF GYRPQFY RTTDVTG + + E +MVMPGD IKMVV LI P+A + G+RFAIREGG+TVGAGV+ II Sbjct: 243 VEIVGVKATTKTTCTGVEMFRKLLDEGRAGENCGVLLRGTKRDDVERGQVLAKPASINPHTTFESEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMVVTLIYPIAMDDGLRFAIREGGRTVGAGVVAKII 393
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_PSEPW (Elongation factor Tu OS=Pseudomonas putida (strain W619) GN=tuf1 PE=3 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 3.558e-50 Identity = 97/157 (61.78%), Postives = 119/157 (75.80%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 +++VGL++T T TGVEMF+K LDE AG+N G+LLRG ++ D++RG VL KPG++ PHTKF A VYVL KEEGGRH+PFF GYRPQFY RTTDVTG + E +MVMPGD I+M V LI +A E G+RFAIREGG+TVGAGV+ IIE Sbjct: 246 LEIVGLRDTTTTTCTGVEMFRKLLDEGRAGENCGVLLRGTKRDDVERGQVLVKPGSVKPHTKFTAEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGNC-----ELPEGVEMVMPGDNIQMTVTLIKTIAMEDGLRFAIREGGRTVGAGVVAKIIE 397
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_PSEPG (Elongation factor Tu OS=Pseudomonas putida (strain GB-1) GN=tuf1 PE=3 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 3.558e-50 Identity = 97/157 (61.78%), Postives = 119/157 (75.80%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 +++VGL++T T TGVEMF+K LDE AG+N G+LLRG ++ D++RG VL KPG++ PHTKF A VYVL KEEGGRH+PFF GYRPQFY RTTDVTG + E +MVMPGD I+M V LI +A E G+RFAIREGG+TVGAGV+ IIE Sbjct: 246 LEIVGLRDTTTTTCTGVEMFRKLLDEGRAGENCGVLLRGTKRDDVERGQVLVKPGSVKPHTKFTAEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGNC-----ELPEGVEMVMPGDNIQMTVTLIKTIAMEDGLRFAIREGGRTVGAGVVAKIIE 397
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_PSEPF (Elongation factor Tu OS=Pseudomonas fluorescens (strain Pf0-1) GN=tuf1 PE=3 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 3.558e-50 Identity = 97/157 (61.78%), Postives = 119/157 (75.80%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 +++VGL++T T TGVEMF+K LDE AG+N G+LLRG ++ D++RG VL KPG++ PHTKF A VYVL KEEGGRH+PFF GYRPQFY RTTDVTG + E +MVMPGD I+M V LI +A E G+RFAIREGG+TVGAGV+ IIE Sbjct: 246 LEIVGLRDTTTTTCTGVEMFRKLLDEGRAGENCGVLLRGTKRDDVERGQVLVKPGSVKPHTKFTAEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGNC-----ELPEGVEMVMPGDNIQMTVTLIKTIAMEDGLRFAIREGGRTVGAGVVAKIIE 397 The following BLAST results are available for this feature:
BLAST of DC900270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900270 ID=DC900270; Name=DC900270; organism=Citrus sinensis; type=EST; length=885bpback to top |