DC900270
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_CAMJD (Elongation factor Tu OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=tuf PE=3 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 4.647e-50 Identity = 95/158 (60.13%), Postives = 124/158 (78.48%), Query Frame = 3 Query: 3 TVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 T+++VG+K+T+ TVTGVEMF+K +D+ AGDNVG+LLRG +K ++ RGMVLAKP +ITPHT F A VY+L K+EGGRH+PFF YRPQFY+RTTDVTG + + +MVMPG+ +++ V LI PVA E+G RFAIREGGKTVG+GV+ II+ Sbjct: 247 TIEIVGIKDTQTTTVTGVEMFRKEMDQGEAGDNVGVLLRGTKKEEVIRGMVLAKPKSITPHTDFEAEVYILNKDEGGRHTPFFNNYRPQFYVRTTDVTGSIKLA-----DGVEMVMPGENVRITVSLIAPVALEEGTRFAIREGGKTVGSGVVSKIIK 399
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_CAMJ8 (Elongation factor Tu OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=tuf PE=3 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 4.647e-50 Identity = 95/158 (60.13%), Postives = 124/158 (78.48%), Query Frame = 3 Query: 3 TVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 T+++VG+K+T+ TVTGVEMF+K +D+ AGDNVG+LLRG +K ++ RGMVLAKP +ITPHT F A VY+L K+EGGRH+PFF YRPQFY+RTTDVTG + + +MVMPG+ +++ V LI PVA E+G RFAIREGGKTVG+GV+ II+ Sbjct: 247 TIEIVGIKDTQTTTVTGVEMFRKEMDQGEAGDNVGVLLRGTKKEEVIRGMVLAKPKSITPHTDFEAEVYILNKDEGGRHTPFFNNYRPQFYVRTTDVTGSIKLA-----DGVEMVMPGENVRITVSLIAPVALEEGTRFAIREGGKTVGSGVVSKIIK 399
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_BUCAT (Elongation factor Tu OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain Tuc7) GN=tuf PE=3 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 4.647e-50 Identity = 97/156 (62.18%), Postives = 120/156 (76.92%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 473 V++VG+K+T T TGVEMF+K LDE AG+NVG+LLRG ++ +I+RG VLAKPG+I PHT F + VYVL KEEGGRH+PFF GYRPQFY RTTDVTG + + E +MVMPGD IKM V LI P+A G+RFAIREGG+TVGAGV+ ++ Sbjct: 243 VEIVGIKKTTKTTCTGVEMFRKLLDEGRAGENVGVLLRGTKRDEIERGQVLAKPGSIHPHTTFESEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGSI-----ELPEGIEMVMPGDNIKMTVTLINPIAMADGLRFAIREGGRTVGAGVVSKVL 393
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_BUCAP (Elongation factor Tu OS=Buchnera aphidicola subsp. Schizaphis graminum GN=tuf PE=3 SV=2) HSP 1 Score: 198.364 bits (503), Expect = 4.647e-50 Identity = 97/156 (62.18%), Postives = 120/156 (76.92%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 473 V++VG+K+T T TGVEMF+K LDE AG+NVG+LLRG ++ +I+RG VLAKPG+I PHT F + VYVL KEEGGRH+PFF GYRPQFY RTTDVTG + + E +MVMPGD IKM V LI P+A G+RFAIREGG+TVGAGV+ ++ Sbjct: 243 VEIVGIKKTTKTTCTGVEMFRKLLDEGRAGENVGVLLRGTKRDEIERGQVLAKPGSIHPHTTFESEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGSI-----ELPEGVEMVMPGDNIKMTVTLIHPIAMADGLRFAIREGGRTVGAGVVSKVL 393
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_BUCAI (Elongation factor Tu OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=tuf PE=3 SV=2) HSP 1 Score: 198.364 bits (503), Expect = 4.647e-50 Identity = 97/156 (62.18%), Postives = 120/156 (76.92%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 473 V++VG+K+T T TGVEMF+K LDE AG+NVG+LLRG ++ +I+RG VLAKPG+I PHT F + VYVL KEEGGRH+PFF GYRPQFY RTTDVTG + + E +MVMPGD IKM V LI P+A G+RFAIREGG+TVGAGV+ ++ Sbjct: 243 VEIVGIKKTTKTTCTGVEMFRKLLDEGRAGENVGVLLRGTKRDEIERGQVLAKPGSIHPHTTFESEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGSI-----ELPEGIEMVMPGDNIKMTVTLINPIAMADGLRFAIREGGRTVGAGVVSKVL 393
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_BUCA5 (Elongation factor Tu OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A) GN=tuf PE=3 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 4.647e-50 Identity = 97/156 (62.18%), Postives = 120/156 (76.92%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 473 V++VG+K+T T TGVEMF+K LDE AG+NVG+LLRG ++ +I+RG VLAKPG+I PHT F + VYVL KEEGGRH+PFF GYRPQFY RTTDVTG + + E +MVMPGD IKM V LI P+A G+RFAIREGG+TVGAGV+ ++ Sbjct: 243 VEIVGIKKTTKTTCTGVEMFRKLLDEGRAGENVGVLLRGTKRDEIERGQVLAKPGSIHPHTTFESEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGSI-----ELPEGIEMVMPGDNIKMTVTLINPIAMADGLRFAIREGGRTVGAGVVSKVL 393
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU2_SHEFN (Elongation factor Tu 2 OS=Shewanella frigidimarina (strain NCIMB 400) GN=tuf2 PE=3 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 4.647e-50 Identity = 97/156 (62.18%), Postives = 120/156 (76.92%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 473 V++VG++ T T TGVEMF+K LDE AG+N G+LLRG ++ D++RG VLAKPG+I PHT F + VYVL KEEGGRH+PFF GYRPQF+ RTTDVTG + + E +MVMPGD IKMVV LI P+A + G+RFAIREGG+TVGAGV+ II Sbjct: 243 VEIVGVRPTTKTTCTGVEMFRKLLDEGRAGENCGVLLRGTKRDDVERGQVLAKPGSINPHTTFESEVYVLSKEEGGRHTPFFKGYRPQFFFRTTDVTGTI-----ELPEGVEMVMPGDNIKMVVTLIYPIAMDDGLRFAIREGGRTVGAGVVAKII 393
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU1_SHEFN (Elongation factor Tu 1 OS=Shewanella frigidimarina (strain NCIMB 400) GN=tuf1 PE=3 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 4.647e-50 Identity = 97/156 (62.18%), Postives = 120/156 (76.92%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 473 V++VG++ T T TGVEMF+K LDE AG+N G+LLRG ++ D++RG VLAKPG+I PHT F + VYVL KEEGGRH+PFF GYRPQF+ RTTDVTG + + E +MVMPGD IKMVV LI P+A + G+RFAIREGG+TVGAGV+ II Sbjct: 243 VEIVGVRPTTKTTCTGVEMFRKLLDEGRAGENCGVLLRGTKRDDVERGQVLAKPGSINPHTTFESEVYVLSKEEGGRHTPFFKGYRPQFFFRTTDVTGTI-----ELPEGVEMVMPGDNIKMVVTLIYPIAMDDGLRFAIREGGRTVGAGVVAKII 393
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_RALEH (Elongation factor Tu OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=tuf1 PE=3 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 6.069e-50 Identity = 96/157 (61.15%), Postives = 121/157 (77.07%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 +++VG+K T T TGVEMF+K LD+ AGDNVGLLLRG ++ D++RG VL KPG+I PHT F VY+L K+EGGRH+PFF YRPQFY RTTDVTG SI KD+E MVMPGD + + V+LI P+A E+G+RFAIREGG+TVGAGV+ I++ Sbjct: 245 IEIVGIKPTVKTTCTGVEMFRKLLDQGQAGDNVGLLLRGTKREDVERGQVLCKPGSIKPHTHFTGEVYILSKDEGGRHTPFFNNYRPQFYFRTTDVTG---SIELPKDKE--MVMPGDNVSITVKLIAPIAMEEGLRFAIREGGRTVGAGVVAKILD 396
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_JANMA (Elongation factor Tu OS=Janthinobacterium sp. (strain Marseille) GN=tuf1 PE=3 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 6.069e-50 Identity = 96/157 (61.15%), Postives = 122/157 (77.71%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 +++VG+++T+ T TGVEMF+K LD+ AGDNVG+LLRG ++ D++RG VLAKPG+I PH F +YVL K+EGGRH+PFF YRPQFY RTTDVTG SI KD+E MVMPGD + + V LI P+A E+G+RFAIREGG+TVGAGV+ IIE Sbjct: 245 IEIVGIRDTQKTTCTGVEMFRKLLDQGQAGDNVGVLLRGTKREDVERGQVLAKPGSIKPHKHFTGEIYVLSKDEGGRHTPFFNNYRPQFYFRTTDVTG---SIELPKDKE--MVMPGDNVSITVMLINPIAMEEGLRFAIREGGRTVGAGVVAKIIE 396 The following BLAST results are available for this feature:
BLAST of DC900270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900270 ID=DC900270; Name=DC900270; organism=Citrus sinensis; type=EST; length=885bpback to top |