DC900270
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_BLOFL (Elongation factor Tu OS=Blochmannia floridanus GN=tuf PE=3 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 6.069e-50 Identity = 93/156 (59.62%), Postives = 122/156 (78.21%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 473 V++VG+K+T T TG+EMF+K LDE AG+NVG+LLRG ++ +++RG VL+KPG I PH+ F + VY+L K+EGGRH+PFF GYRPQFY RTTDVTG + + +E +MVMPGD IKMVV LI P+A + G+RFAIREGG+TVGAGV+ +I Sbjct: 243 VEIVGIKDTVKTTCTGIEMFRKLLDEGRAGENVGVLLRGTKRDEVERGQVLSKPGCIKPHSNFESEVYILNKDEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPKEVEMVMPGDNIKMVVHLISPIAMDDGLRFAIREGGRTVGAGVVSRVI 393
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_BART1 (Elongation factor Tu OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=tuf1 PE=3 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 6.069e-50 Identity = 93/157 (59.24%), Postives = 121/157 (77.07%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 ++++G++ T TVTGVEMF+K LD+ AGDN+G LLRGV + I+RG VLAKPG++TPHT+F A Y+L K+EGGRH+PFF YRPQFY RTTDVTG V+ E ++MVMPGD + M V LI+P+A E+ +RFAIREGG+TVGAG++ IIE Sbjct: 240 IEIIGIRPTSKTTVTGVEMFRKLLDQGQAGDNIGALLRGVDREGIERGQVLAKPGSVTPHTRFKAEAYILTKDEGGRHTPFFTNYRPQFYFRTTDVTGIVT-----LPEGTEMVMPGDNVAMDVSLIVPIAMEEKLRFAIREGGRTVGAGIVSKIIE 391
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_NOCSJ (Elongation factor Tu OS=Nocardioides sp. (strain BAA-499 / JS614) GN=tuf PE=3 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 7.927e-50 Identity = 97/156 (62.18%), Postives = 123/156 (78.85%), Query Frame = 3 Query: 6 VDLVGLKE-TRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSI 470 V+++G++E ++ TVTGVEMF+K LDE AG+NVGLLLRG ++ D++RGMV+AKPGT TPHT F A VY+L KEEGGRH+PFF YRPQFY RTTDVTG V+ E ++MVMPGD +M VELI P+A ++G+RFAIREGG+TVGAG + I Sbjct: 245 VEILGIREASQKSTVTGVEMFRKLLDEGQAGENVGLLLRGTKREDVERGMVVAKPGTTTPHTNFEASVYILSKEEGGRHTPFFNNYRPQFYFRTTDVTGVVT-----LPEGTEMVMPGDNTEMAVELIQPIAMDEGLRFAIREGGRTVGAGRVTKI 395
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_NITHX (Elongation factor Tu OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=tuf PE=3 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 7.927e-50 Identity = 94/157 (59.87%), Postives = 120/157 (76.43%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 +++VG++ T+ TVTGVEMF+K LD+ AGDN+G LLRG ++ D++RG VL KPG++ PHTKF A Y+L KEEGGRH+PFF YRPQFY RTTDVTG V ++MVMPGD + M V LI+P+A E+ +RFAIREGG+TVGAGV+ SIIE Sbjct: 245 IEIVGIRPTQKTTVTGVEMFRKLLDQGQAGDNIGALLRGTKREDVERGQVLCKPGSVKPHTKFKAEAYILTKEEGGRHTPFFTNYRPQFYFRTTDVTGVV-----HLPAGTEMVMPGDNVAMEVHLIVPIAMEEKLRFAIREGGRTVGAGVVASIIE 396
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_DESVM (Elongation factor Tu OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=tuf PE=3 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 7.927e-50 Identity = 95/157 (60.51%), Postives = 120/157 (76.43%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 V++VG+K+T T TGVEMF+K LD+ AGDN+G LLRG+++ D++RG VLA P +I PH KF A VYVL KEEGGRH+PFF+GYRPQFY RTTD+TG ++ + +MVMPGD VELI P+A EQG+RFAIREGG+TVGAGV+ I+E Sbjct: 246 VEIVGIKDTVKSTCTGVEMFRKLLDQGQAGDNIGALLRGIKREDVERGQVLAAPKSIKPHRKFKAEVYVLSKEEGGRHTPFFSGYRPQFYFRTTDITGIIALA-----DGVEMVMPGDNSTFTVELIAPIAMEQGLRFAIREGGRTVGAGVVSEILE 397
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_DESHY (Elongation factor Tu OS=Desulfitobacterium hafniense (strain Y51) GN=tuf PE=3 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 7.927e-50 Identity = 100/158 (63.29%), Postives = 122/158 (77.22%), Query Frame = 3 Query: 6 VDLVGLKETRNFTV-TGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 +++VGL E TV TGVEMF+K LD+A AGDN+G LLRGV + DI+RG VLAK G+I PHTKF V+VL KEEGGRH+PFF YRPQFY RTTDVTG V+ E ++MVMPGDR+ + E+I P+A E+G+RFAIREGG+TVGAGV+ SIIE Sbjct: 248 IEIVGLTEAPRKTVCTGVEMFRKLLDQAQAGDNIGALLRGVDRKDIERGQVLAKTGSIKPHTKFTGEVFVLSKEEGGRHTPFFNNYRPQFYFRTTDVTGVVT-----LPEGTEMVMPGDRVTITCEIISPIAMEEGLRFAIREGGRTVGAGVVVSIIE 400
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_DESHD (Elongation factor Tu OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=tuf PE=3 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 7.927e-50 Identity = 100/158 (63.29%), Postives = 122/158 (77.22%), Query Frame = 3 Query: 6 VDLVGLKETRNFTV-TGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 +++VGL E TV TGVEMF+K LD+A AGDN+G LLRGV + DI+RG VLAK G+I PHTKF V+VL KEEGGRH+PFF YRPQFY RTTDVTG V+ E ++MVMPGDR+ + E+I P+A E+G+RFAIREGG+TVGAGV+ SIIE Sbjct: 248 IEIVGLTEAPRKTVCTGVEMFRKLLDQAQAGDNIGALLRGVDRKDIERGQVLAKTGSIKPHTKFTGEVFVLSKEEGGRHTPFFNNYRPQFYFRTTDVTGVVT-----LPEGTEMVMPGDRVTITCEIISPIAMEEGLRFAIREGGRTVGAGVVVSIIE 400
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_BORGA (Elongation factor Tu OS=Borrelia garinii GN=tuf PE=3 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 7.927e-50 Identity = 98/157 (62.42%), Postives = 119/157 (75.80%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 V++VG+KETR TVTGVEMFQK L++ AGDNVGLLLRGV K DI+RG VL+ PGTITPH KF A +Y L KEEGGRH PFF GYRPQF+ RTTDVTG V+ E +MVMPGD + +VVELI +A ++ + FA+REGG+TV +G I I+E Sbjct: 244 VEIVGIKETRKTTVTGVEMFQKILEQGQAGDNVGLLLRGVDKKDIERGQVLSAPGTITPHKKFKASIYCLTKEEGGRHKPFFPGYRPQFFFRTTDVTGVVAL------EGKEMVMPGDNVDIVVELISSIAMDKNVEFAVREGGRTVASGRILEILE 394
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_BORAP (Elongation factor Tu OS=Borrelia afzelii (strain PKo) GN=tuf PE=3 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 7.927e-50 Identity = 98/157 (62.42%), Postives = 119/157 (75.80%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 V++VG+KETR TVTGVEMFQK L++ AGDNVGLLLRGV K DI+RG VL+ PGTITPH KF A +Y L KEEGGRH PFF GYRPQF+ RTTDVTG V+ E +MVMPGD + +VVELI +A ++ + FA+REGG+TV +G I I+E Sbjct: 244 VEIVGIKETRKTTVTGVEMFQKILEQGQAGDNVGLLLRGVDKKDIERGQVLSAPGTITPHKKFKASIYCLTKEEGGRHKPFFPGYRPQFFFRTTDVTGVVAL------EGKEMVMPGDNVDIVVELISSIAMDKNVEFAVREGGRTVASGRILEILE 394
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU2_WOLPM (Elongation factor Tu 2 OS=Wolbachia pipientis wMel GN=tuf2 PE=3 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 7.927e-50 Identity = 92/157 (58.60%), Postives = 124/157 (78.98%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 ++++GLK T+ TGVEMF+K LD+ AG NVG+LLRG ++ +++RG VLAKPGTITPH KF A VY+LKKEEGGRH+PFFA Y+PQFY+RTTDVTG + + + +MVMPGD + + VEL +P+A ++G+RFAIREGG+TVG+GV+ I+E Sbjct: 239 IEIIGLKATQKTICTGVEMFKKLLDKGSAGLNVGILLRGTKREEVERGQVLAKPGTITPHRKFKAEVYILKKEEGGRHTPFFANYQPQFYLRTTDVTGSIKLL-----DGKEMVMPGDNVSVEVELQVPIAMDKGLRFAIREGGRTVGSGVVSEILE 390 The following BLAST results are available for this feature:
BLAST of DC900270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900270 ID=DC900270; Name=DC900270; organism=Citrus sinensis; type=EST; length=885bpback to top |