DC900267
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900267 vs. ExPASy Swiss-Prot
Match: SYYC_XENTR (Tyrosyl-tRNA synthetase, cytoplasmic OS=Xenopus tropicalis GN=yars PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.598e-13 Identity = 42/95 (44.21%), Postives = 58/95 (61.05%), Query Frame = 3 Query: 3 GIKSHAMVLCASTSDNTK-VELVEPPKSAKIGERVAFPGFE-GEPDDVLNPKKKVWETVQVDLHTNTELVACYKDIPFTTSAGICTVSSIQSGSI 281 GI+S M+LCAST K VE ++PP + GER+ G+E GEP+ L PKKKV+E +QVD + +L A +K F T G T +++ GSI Sbjct: 433 GIESQGMLLCASTEGEQKQVEPLDPPTGSAPGERIYIEGYENGEPEGELKPKKKVFEKLQVDFRISDDLCAQWKGKNFLTKLGSVTCKTLRGGSI 527
BLAST of DC900267 vs. ExPASy Swiss-Prot
Match: G4P1_YEAST (GU4 nucleic-binding protein 1 OS=Saccharomyces cerevisiae GN=ARC1 PE=1 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 5.787e-13 Identity = 41/74 (55.41%), Postives = 47/74 (63.51%), Query Frame = 3 Query: 3 GIKSHAMVLCASTSDNTKVELVEPPKSAKIGERVAFPGFEGE-PDDVLNPKKKVWETVQVDLHTNTELVACYKD 221 GIKS AMVLC S D KVE VEPPK +K G++V F GF E P LNPKKK+WE +Q TN L +KD Sbjct: 275 GIKSTAMVLCGSNDD--KVEFVEPPKDSKAGDKVFFEGFGDEAPMKQLNPKKKIWEHLQPHFTTNDGLEVIFKD 346
BLAST of DC900267 vs. ExPASy Swiss-Prot
Match: SYYC_PONAB (Tyrosyl-tRNA synthetase, cytoplasmic OS=Pongo abelii GN=YARS PE=2 SV=3) HSP 1 Score: 73.1738 bits (178), Expect = 9.871e-13 Identity = 39/95 (41.05%), Postives = 58/95 (61.05%), Query Frame = 3 Query: 3 GIKSHAMVLCASTSD-NTKVELVEPPKSAKIGERVAFPGFE-GEPDDVLNPKKKVWETVQVDLHTNTELVACYKDIPFTTSAGICTVSSIQSGSI 281 G++S M+LCAS N +VE ++PP + GERV G+E G+PD+ L PKKKV+E +Q D + E +A +K F T G + S++ G+I Sbjct: 433 GVESQGMLLCASIEGINRQVEPLDPPAGSAPGERVFVKGYEKGQPDEELKPKKKVFEKLQADFKISEECIAQWKQTNFMTKLGSISCKSLKGGNI 527
BLAST of DC900267 vs. ExPASy Swiss-Prot
Match: SYYC_MOUSE (Tyrosyl-tRNA synthetase, cytoplasmic OS=Mus musculus GN=Yars PE=2 SV=3) HSP 1 Score: 71.633 bits (174), Expect = 2.872e-12 Identity = 38/95 (40.00%), Postives = 57/95 (60.00%), Query Frame = 3 Query: 3 GIKSHAMVLCASTSD-NTKVELVEPPKSAKIGERVAFPGFE-GEPDDVLNPKKKVWETVQVDLHTNTELVACYKDIPFTTSAGICTVSSIQSGSI 281 G+ S M+LCAS + +VE ++PP + GERV G+E G+PD+ L PKKKV+E +Q D + E +A +K F T G + S++ G+I Sbjct: 433 GVDSQGMLLCASVEGVSRQVEPLDPPAGSAPGERVFVQGYEKGQPDEELKPKKKVFEKLQADFKISEECIAQWKQTNFMTKLGFVSCKSLKGGNI 527
BLAST of DC900267 vs. ExPASy Swiss-Prot
Match: SYYC_HUMAN (Tyrosyl-tRNA synthetase, cytoplasmic OS=Homo sapiens GN=YARS PE=1 SV=4) HSP 1 Score: 71.2478 bits (173), Expect = 3.751e-12 Identity = 38/95 (40.00%), Postives = 57/95 (60.00%), Query Frame = 3 Query: 3 GIKSHAMVLCASTSD-NTKVELVEPPKSAKIGERVAFPGFE-GEPDDVLNPKKKVWETVQVDLHTNTELVACYKDIPFTTSAGICTVSSIQSGSI 281 G++S M+LCAS N +VE ++PP + GE V G+E G+PD+ L PKKKV+E +Q D + E +A +K F T G + S++ G+I Sbjct: 433 GVESQGMLLCASIEGINRQVEPLDPPAGSAPGEHVFVKGYEKGQPDEELKPKKKVFEKLQADFKISEECIAQWKQTNFMTKLGSISCKSLKGGNI 527
BLAST of DC900267 vs. ExPASy Swiss-Prot
Match: SYYC_RAT (Tyrosyl-tRNA synthetase, cytoplasmic OS=Rattus norvegicus GN=Yars PE=2 SV=3) HSP 1 Score: 70.8626 bits (172), Expect = 4.899e-12 Identity = 38/95 (40.00%), Postives = 57/95 (60.00%), Query Frame = 3 Query: 3 GIKSHAMVLCASTSD-NTKVELVEPPKSAKIGERVAFPGFE-GEPDDVLNPKKKVWETVQVDLHTNTELVACYKDIPFTTSAGICTVSSIQSGSI 281 G+ S M+LCAS + +VE ++PP + GERV G+E G+PD+ L PKKKV+E +Q D + + VA +K F T G + S++ G+I Sbjct: 433 GVDSQGMLLCASVEGVSRQVEPLDPPAGSAPGERVFVQGYEKGQPDEELKPKKKVFEKLQADFKISDDCVAQWKQTNFMTKLGFVSCKSLKGGNI 527
BLAST of DC900267 vs. ExPASy Swiss-Prot
Match: SYMC_CAEEL (Methionyl-tRNA synthetase, cytoplasmic OS=Caenorhabditis elegans GN=mrs-1 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.425e-11 Identity = 36/75 (48.00%), Postives = 48/75 (64.00%), Query Frame = 3 Query: 3 GIKSHAMVLCASTSDNTKVELVEPPKSAKIGERVAFPGFEGEPDDVLNPKKKVWETVQVDLHTNTELVACYKDIP 227 G++S AMV+CAS+ D KVE++E P +K G V P + PD+ LNPKKK+WETV DL + E A +K P Sbjct: 825 GVESRAMVMCASSPD--KVEIMEVPADSKPGTPVVCPPYTHRPDEQLNPKKKIWETVAEDLKVSAEGFAEWKGQP 897 The following BLAST results are available for this feature:
BLAST of DC900267 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900267 ID=DC900267; Name=DC900267; organism=Citrus sinensis; type=EST; length=562bpback to top |