DC900254
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900254 vs. ExPASy Swiss-Prot
Match: ODPB_MYCGE (Pyruvate dehydrogenase E1 component subunit beta OS=Mycoplasma genitalium GN=pdhB PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.127e-14 Identity = 46/122 (37.70%), Postives = 67/122 (54.92%), Query Frame = 1 Query: 1 VIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPLV-FEPFYMPTKNKILDAI 363 +I EGS++T+V +G + + E + ELIDL+T+ PWDK+TV SV+KTGRLL+ EA + AEI S+ E F L+ RV G D PL E + +++DA+ Sbjct: 200 LISEGSELTIVSYGPTMFDLINLVYSGELKDKGIELIDLRTISPWDKQTVFNSVKKTGRLLVVTEAVKSFTTSAEIITSVTEELFTYLKKAPQRVTGFDIVVPLARGEKYQFEINARVIDAV 321
BLAST of DC900254 vs. ExPASy Swiss-Prot
Match: ODPB_CYAME (Pyruvate dehydrogenase E1 component subunit beta OS=Cyanidioschyzon merolae GN=pdhB PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.127e-14 Identity = 45/128 (35.16%), Postives = 71/128 (55.47%), Query Frame = 1 Query: 1 VIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPL--VFEPFYMPTKNKILDAIKSTVN 378 V+REGSD+T++ + L + QA +G++ E+IDL +L P D ET+ SV KT + +I E TGG AE+ A I F L+AP+ R+ D P P E + +I++A+K+ ++ Sbjct: 198 VVREGSDVTIITYSRMLHHVMQAVKQLVAQGMNPEVIDLISLKPIDLETLVTSVSKTHKAIIVEECMQTGGIAAEVMAQIYSHAFDELDAPIRRLSSKDVPTPYNGYLEQACLVQPTQIVEAVKTLMS 325
BLAST of DC900254 vs. ExPASy Swiss-Prot
Match: ACOB_BACSU (Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta OS=Bacillus subtilis GN=acoB PE=3 SV=3) HSP 1 Score: 76.2554 bits (186), Expect = 1.552e-13 Identity = 41/118 (34.75%), Postives = 67/118 (56.78%), Query Frame = 1 Query: 7 REGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPL--VFEPFYMPTKNKIL 354 REG+D+TL G Q++ +A + GI E++D ++L P D++ + S+ KT RL+I EA +I+A + ++ F L+AP+ R+ TP P V E Y+PT +KI+ Sbjct: 212 REGNDVTLFAVGKQVNTALEAAAQLSERGIEAEVLDPRSLSPLDEDAIFTSLEKTNRLIIIDEANPRCSIATDIAALVADKGFDLLDAPIKRITAPHTPVPFSPVLEDQYLPTPDKIV 329
BLAST of DC900254 vs. ExPASy Swiss-Prot
Match: ODPB_PORPU (Pyruvate dehydrogenase E1 component subunit beta OS=Porphyra purpurea GN=pdhB PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.647e-13 Identity = 46/128 (35.94%), Postives = 71/128 (55.47%), Query Frame = 1 Query: 1 VIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPL--VFEPFYMPTKNKILDAIKSTVN 378 V+R+G DIT++ + + +A +G E++DL +L P D +++ SV+KT R+LI E T G GAE+ A I E F L+APV R+ D P P E + ++I+DA+K+ VN Sbjct: 197 VVRKGKDITILTYSRMRHHVTEALPLLLNDGYDPEVLDLISLKPLDIDSISVSVKKTHRVLIVEECMKTAGIGAELIAQINEHLFDELDAPVVRLSSQDIPTPYNGSLEQATVIQPHQIIDAVKNIVN 324
BLAST of DC900254 vs. ExPASy Swiss-Prot
Match: ODPB_CAEEL (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Caenorhabditis elegans GN=C04C3.3 PE=1 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 5.898e-13 Identity = 42/127 (33.07%), Postives = 70/127 (55.12%), Query Frame = 1 Query: 7 REGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILER-CFLRLEAPVARVCGLDTPFPL--VFEPFYMPTKNKILDAIKSTVN 378 R G +T+V + + +A E G+S E+I+L++L P+D E++ SV KT L+ G G+EI+A ++E F +L+AP+ RV G+D P P E +PT ++ A+K ++N Sbjct: 224 RAGDHVTIVSYSRGVEFSLEAAKQLEAIGVSAEVINLRSLRPFDFESIRQSVHKTHHLVSVETGWPFAGIGSEIAAQVMESDVFDQLDAPLLRVTGVDVPMPYTQTLEAAALPTAEHVVKAVKKSLN 350
BLAST of DC900254 vs. ExPASy Swiss-Prot
Match: ODPB_PORYE (Pyruvate dehydrogenase E1 component subunit beta OS=Porphyra yezoensis GN=pdhB PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.006e-12 Identity = 46/126 (36.51%), Postives = 70/126 (55.56%), Query Frame = 1 Query: 4 IREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPL--VFEPFYMPTKNKILDAIKSTV 375 +R+G DIT++ + + QA KEG E+IDL +L P D +++ SV+KT ++LI E T G GAE+ A I E F L+APV R+ D P P E + ++I+D++KS + Sbjct: 198 VRKGKDITILTYSRMRHHVIQALPALLKEGYDPEVIDLISLKPLDIDSISISVKKTHKVLIVEECMKTAGIGAELIAQINEYLFDELDAPVVRLSSQDIPTPYNGSLEQATVIQPSQIVDSVKSII 323
BLAST of DC900254 vs. ExPASy Swiss-Prot
Match: ODPB_GRATL (Pyruvate dehydrogenase E1 component subunit beta OS=Gracilaria tenuistipitata var. liui GN=pdhB PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.716e-12 Identity = 44/127 (34.65%), Postives = 71/127 (55.91%), Query Frame = 1 Query: 1 VIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPL--VFEPFYMPTKNKILDAIKSTV 375 ++R+G D+T++ + + QA +D +G + E+IDL +L P D ++ S+ KT +L+I E TGG GAEI A I + F L+AP+ R+ D P P E + +I++A+KS V Sbjct: 197 LVRDGLDVTILTYSRMRHHVMQAVVDLVNDGYNPEVIDLISLKPLDITSIAQSLMKTHKLIIVEECMKTGGIGAEIIAQINDNYFDFLDAPIVRLSSQDIPTPYNGKLEKATVIYPQQIIEAVKSIV 323
BLAST of DC900254 vs. ExPASy Swiss-Prot
Match: ODPB_CHAGL (Pyruvate dehydrogenase E1 component subunit beta OS=Chaetosphaeridium globosum GN=pdhB PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.993e-12 Identity = 44/124 (35.48%), Postives = 67/124 (54.03%), Query Frame = 1 Query: 1 VIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPL--VFEPFYMPTKNKILDAIK 366 V+R G+DIT++ + + QA +G E+ID+ +L P D T+ SVRKT ++LI E TGG GA + A+ILE F L+AP+ + D P P E + N+I+ A++ Sbjct: 197 VVRPGNDITILTYSRMRHHVLQAAKVLVNKGYDPEIIDILSLKPLDMGTISLSVRKTHKVLIVEECMRTGGIGASLRAAILEDLFDYLDAPIQCLSSQDVPTPYSGPLEELTVIQPNQIIQAVE 320
BLAST of DC900254 vs. ExPASy Swiss-Prot
Match: ODPB_YEAST (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Saccharomyces cerevisiae GN=PDB1 PE=1 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 8.516e-12 Identity = 44/128 (34.38%), Postives = 71/128 (55.47%), Query Frame = 1 Query: 7 REGSDITLVGWGAQLSI-MEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILE-RCFLRLEAPVARVCGLDTPFPLV--FEPFYMPTKNKILDAIKSTVN 378 REG+DI++V + + +E A + +K G+S E+I+L+++ P D E + +V+KT L+ + G GAEI A ++E F L+AP+ RV G D P P E F P I+ A+K ++ Sbjct: 237 REGTDISIVTYTRNVQFSLEAAEILQKKYGVSAEVINLRSIRPLDTEAIIKTVKKTNHLITVESTFPSFGVGAEIVAQVMESEAFDYLDAPIQRVTGADVPTPYAKELEDFAFPDTPTIVKAVKEVLS 364
BLAST of DC900254 vs. ExPASy Swiss-Prot
Match: ODPB_ASCSU (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Ascaris suum PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.453e-11 Identity = 44/127 (34.65%), Postives = 64/127 (50.39%), Query Frame = 1 Query: 7 REGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILER-CFLRLEAPVARVCGLDTPFPLV--FEPFYMPTKNKILDAIKSTVN 378 R G DIT+V + + A + K GI CE+I+L+ + P D +TV+ SV KT L+ G GAEISA + E F L+ P+ RV G+D P P E +P ++ +K +N Sbjct: 233 RPGKDITIVSLSIGVDVSLHAADELAKSGIDCEVINLRCVRPLDFQTVKDSVIKTKHLVTVESGWPNCGVGAEISARVTESDAFGYLDGPILRVTGVDVPMPYAQPLETAALPQPADVVKMVKKCLN 359 The following BLAST results are available for this feature:
BLAST of DC900254 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 52
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900254 ID=DC900254; Name=DC900254; organism=Citrus sinensis; type=EST; length=642bpback to top |