DC900244
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900244 vs. ExPASy Swiss-Prot
Match: S35E1_HUMAN (Solute carrier family 35 member E1 OS=Homo sapiens GN=SLC35E1 PE=1 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 2.545e-23 Identity = 63/179 (35.20%), Postives = 105/179 (58.66%), Query Frame = 1 Query: 25 NMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTEVSFNWAGFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYVRSL----IAAICYHAYQQVSYMILQRVSPVTHSVGNCVKR 549 ++S+ KV VS+ HT+KAT P + VLLS + + E + V SLIPI+ GV LA+VTE+SF+ G SA+A+ L +N+ SKKV+ ++ + ++ L +I+ + MIP ++++ A+L S+ L + +L ++ C A +++ IL VSP+++SV N KR Sbjct: 127 HVSIWKVPVSYAHTVKATMPIWVVLLSRIIMKEKQSTKVYLSLIPIISGVLLATVTELSFDMWGLVSALAATLCFSLQNIFSKKVL--RDSRIHHLRLLNILGCHAVFFMIPTWVLVD----LSAFLVSSDLTYVYQWPWTLLLLAVSGFCNFAQNVIAFSILNLVSPLSYSVANATKR 299 HSP 2 Score: 29.6462 bits (65), Expect = 2.545e-23 Identity = 12/29 (41.38%), Postives = 18/29 (62.07%), Query Frame = 2 Query: 575 MFFRTPVSAINAFGTGIALAGVFLYSRVK 661 + R PV++ N G A+ GVFLY++ K Sbjct: 308 IMLRNPVTSTNVLGMMTAILGVFLYNKTK 336
BLAST of DC900244 vs. ExPASy Swiss-Prot
Match: S35E1_RAT (Solute carrier family 35 member E1 OS=Rattus norvegicus GN=Slc35e1 PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 7.296e-23 Identity = 58/175 (33.14%), Postives = 102/175 (58.29%), Query Frame = 1 Query: 25 NMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTEVSFNWAGFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYVRSLIAAICYHAYQQVSYMILQRVSPVTHSVGNCVKR 549 ++S+ KV VS+ HT+KAT P + VLLS + + E + V SL+PI+ GV LA+VTE+SF+ G SA+A+ L +N+ SKKV+ ++ + ++ L +I+ + MIP ++++ TF + + + +++ C A +++ IL +SP+++SV N KR Sbjct: 127 HVSIWKVPVSYAHTVKATMPIWVVLLSRIIMKEKQSTKVYLSLVPIISGVLLATVTELSFDVWGLVSALAATLCFSLQNIFSKKVL--RDSRIHHLRLLNILGCHAVFFMIPTWVLVDLSTFLVSSDLAYVSQWPWTLLLLVVSGFCNFAQNVIAFSILNLISPLSYSVANATKR 299 HSP 2 Score: 29.6462 bits (65), Expect = 7.296e-23 Identity = 12/29 (41.38%), Postives = 18/29 (62.07%), Query Frame = 2 Query: 575 MFFRTPVSAINAFGTGIALAGVFLYSRVK 661 + R PV++ N G A+ GVFLY++ K Sbjct: 308 IMLRNPVTSTNVLGMMTAILGVFLYNKTK 336
BLAST of DC900244 vs. ExPASy Swiss-Prot
Match: S35E1_MOUSE (Solute carrier family 35 member E1 OS=Mus musculus GN=Slc35e1 PE=1 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 7.296e-23 Identity = 62/179 (34.64%), Postives = 105/179 (58.66%), Query Frame = 1 Query: 25 NMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTEVSFNWAGFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYVRSL----IAAICYHAYQQVSYMILQRVSPVTHSVGNCVKR 549 ++S+ KV VS+ HT+KAT P + VLLS + + E + V SL+PI+ GV LA+VTE+SF+ G SA+A+ L +N+ SKKV+ ++ + ++ L +I+ + MIP ++++ TF L S+ L + +L ++ C A +++ IL +SP+++SV N KR Sbjct: 127 HVSIWKVPVSYAHTVKATMPIWVVLLSRIIMKEKQSTKVYLSLVPIISGVLLATVTELSFDVWGLVSALAATLCFSLQNIFSKKVL--RDSRIHHLRLLNILGCHAVFFMIPTWVLVDLSTF----LVSSDLAYVSQWPWTLLLLAVSGFCNFAQNVIAFSILNLISPLSYSVANATKR 299 HSP 2 Score: 29.6462 bits (65), Expect = 7.296e-23 Identity = 12/29 (41.38%), Postives = 18/29 (62.07%), Query Frame = 2 Query: 575 MFFRTPVSAINAFGTGIALAGVFLYSRVK 661 + R PV++ N G A+ GVFLY++ K Sbjct: 308 IMLRNPVTSTNVLGMMTAILGVFLYNKTK 336
BLAST of DC900244 vs. ExPASy Swiss-Prot
Match: S35E1_DROME (Solute carrier family 35 member E1 homolog OS=Drosophila melanogaster GN=CG14621 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.614e-22 Identity = 60/182 (32.97%), Postives = 106/182 (58.24%), Query Frame = 1 Query: 7 LGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTEVSFNWAGFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYVRSLIAAICYHAYQQ-VSYMILQRVSPVTHSVGNCVKR 549 L ++ +++SL KV VS+ HT+KAT P F+V+L+ +F GE V SL+PI+ GV +A+VTE+SF+ G SA+ S + +N+ SKKV+ K+ + ++ L ++ +S + +P+ L M+ + +A NL + L A + Q +++ +L V+P+T++V + KR Sbjct: 90 LASVTSHISLWKVPVSYAHTVKATMPLFTVVLTRVFFGEKQPTLVYLSLLPIITGVGIATVTEISFDMMGLISALISTMGFSMQNIFSKKVL--KDTNIHHLRLLHLLGKLSLFIFLPLWLYMDSFA---VFRHTAIKNLDYRVIALLFADGVLNWLQNIIAFSVLSLVTPLTYAVASASKR 266 HSP 2 Score: 26.9498 bits (58), Expect = 4.614e-22 Identity = 10/26 (38.46%), Postives = 17/26 (65.38%), Query Frame = 2 Query: 590 PVSAINAFGTGIALAGVFLYSRVKRI 667 PV+ +N G +A+ GV Y+R K++ Sbjct: 280 PVTWVNCVGMTLAIVGVLCYNRAKQL 305
BLAST of DC900244 vs. ExPASy Swiss-Prot
Match: S35E2_HUMAN (Solute carrier family 35 member E2 OS=Homo sapiens GN=SLC35E2 PE=2 SV=2) HSP 1 Score: 103.99 bits (258), Expect = 1.448e-21 Identity = 59/173 (34.10%), Postives = 99/173 (57.23%), Query Frame = 1 Query: 28 MSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTEVSFNWAGFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYVRSLIAAICYHAYQQVSYMILQRVSPVTHSVGNCVK 546 +SL VAVSF T+K++ P F+V++S M LGE+ L V SLIP+MGG+AL + TE+SFN GF +A+++N+ + +NV SKK++ + L + + +++P + V +S N ++V + L + +H +Y ++ ++SPVT SV + VK Sbjct: 162 VSLKNVAVSFAETVKSSAPIFTVIMSRMILGEYTGLLVNLSLIPVMGGLALCTATEISFNVLGFSAALSTNIMDCLQNVFSKKLLSGDKYRFSAPELQFYTSAAAVAMLVPARVFFTDVPVIGRSGKSFSYN-QDVVLLLLTDGVLFHLQSVTAYALMGKISPVTFSVASTVK 333
BLAST of DC900244 vs. ExPASy Swiss-Prot
Match: S35E2_MOUSE (Solute carrier family 35 member E2 OS=Mus musculus GN=Slc35e2 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 3.566e-20 Identity = 58/173 (33.53%), Postives = 97/173 (56.07%), Query Frame = 1 Query: 28 MSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTEVSFNWAGFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYVRSLIAAICYHAYQQVSYMILQRVSPVTHSVGNCVK 546 +SL VAVSF T+K++ P F+V++S M LGE+ L V SLIP+MGG+AL + TE+SFN GF +A+++N+ + +NV SKK++ + L + + L+IP + +S + +++ + L +H +Y ++ ++SPVT SV + VK Sbjct: 162 VSLKNVAVSFAETVKSSAPIFTVIMSRMILGEYTGLLVNLSLIPVMGGLALCTATEISFNILGFSAALSTNIMDCLQNVFSKKLLSGDKYRFSAPELQFYTSAAAVALLIPAWTFFMDIPVIGRSGKSFSYS-QDIVLLLLTDGALFHLQSVTAYALMGKISPVTFSVASTVK 333
BLAST of DC900244 vs. ExPASy Swiss-Prot
Match: YG1B_SCHPO (Putative transporter C83.11 OS=Schizosaccharomyces pombe GN=SPBC83.11 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 9.407e-13 Identity = 50/187 (26.74%), Postives = 91/187 (48.66%), Query Frame = 1 Query: 10 GNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTEVSFNWAGFWSAMASNLTNQSRNVLSKKVMV-------NKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYVRSLIAAICYHAYQQVSYMILQRVSPVTHSVGNCVKR 549 G++F +++ K+ VS HT+KA P F+VL + SL+P+ GV LA E+S + G A+ S S+N+ K+ + + ++ + + L + ++FI+MIPV L EG AYL G V++ + + + +++ +L +SPV +S+ + +KR Sbjct: 83 GHVFGSLATTKIPVSTVHTVKALSPLFTVLAYRFMFRHVYSAMTYFSLVPLTFGVTLACSFELSADIVGLLYALISTCIFVSQNIFGSKIFMEAKSHSTHTKKHYNKLNLLLYSSGVAFIVMIPVWLYQEGF----AYLPEVG---SPVFLNLIYNGLSHFFQNILAFTLLSIISPVAYSIASLIKR 262 The following BLAST results are available for this feature:
BLAST of DC900244 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900244 ID=DC900244; Name=DC900244; organism=Citrus sinensis; type=EST; length=1002bpback to top |