DC900215
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_SYNP6 (Uroporphyrinogen decarboxylase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=hemE PE=3 SV=1) HSP 1 Score: 311.997 bits (798), Expect = 2.657e-84 Identity = 146/252 (57.94%), Postives = 191/252 (75.79%), Query Frame = 1 Query: 1 IKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAK 756 I+ KGP++ PI T +V V + DPEE+ P++ L LR+EV NEAAVLGF GAP+TLA+Y +EG SSK ++ IK LAFS+P +LH LL K ++A Y+ +Q D GAQ VQ+FDSWA +LSP+D++ F+LPY +++ VK HP++ LILY SGS G+LER+ +G D+VS+DWTVD+ + RRRLGPD+ +QGN+DPG LFGS+DFI +RI DTVRKAG +HILNLGHGI GTPE+N HFFE AK Sbjct: 93 IESKGPILEPPIRTAEQVAAVHDLDPEEATPFIRPILETLRQEVGNEAAVLGFAGAPWTLAAYAIEGKSSKTYANIKHLAFSEPTILHELLGKLADNIAIYLCHQIDCGAQVVQLFDSWAGQLSPIDYDTFALPYQQRVFQQVKAKHPEVPLILYISGSAGVLERMGQSGCDIVSVDWTVDLLDARRRLGPDIGLQGNIDPGVLFGSQDFIRDRILDTVRKAGNQRHILNLGHGILPGTPEDNARHFFETAK 344
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_SYNE7 (Uroporphyrinogen decarboxylase OS=Synechococcus elongatus (strain PCC 7942) GN=hemE PE=3 SV=2) HSP 1 Score: 311.997 bits (798), Expect = 2.657e-84 Identity = 146/252 (57.94%), Postives = 191/252 (75.79%), Query Frame = 1 Query: 1 IKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAK 756 I+ KGP++ PI T +V V + DPEE+ P++ L LR+EV NEAAVLGF GAP+TLA+Y +EG SSK ++ IK LAFS+P +LH LL K ++A Y+ +Q D GAQ VQ+FDSWA +LSP+D++ F+LPY +++ VK HP++ LILY SGS G+LER+ +G D+VS+DWTVD+ + RRRLGPD+ +QGN+DPG LFGS+DFI +RI DTVRKAG +HILNLGHGI GTPE+N HFFE AK Sbjct: 93 IESKGPILEPPIRTAEQVAAVHDLDPEEATPFIRPILETLRQEVGNEAAVLGFAGAPWTLAAYAIEGKSSKTYANIKHLAFSEPTILHELLGKLADNIAIYLCHQIDCGAQVVQLFDSWAGQLSPIDYDTFALPYQQRVFQQVKAKHPEVPLILYISGSAGVLERMGQSGCDIVSVDWTVDLLDARRRLGPDIGLQGNIDPGVLFGSQDFIRDRILDTVRKAGNQRHILNLGHGILPGTPEDNARHFFETAK 344
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_SYNS3 (Uroporphyrinogen decarboxylase OS=Synechococcus sp. (strain CC9311) GN=hemE PE=3 SV=1) HSP 1 Score: 311.612 bits (797), Expect = 3.470e-84 Identity = 151/254 (59.45%), Postives = 194/254 (76.38%), Query Frame = 1 Query: 1 IKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAKAI 762 ++ KGP I DPI + ++V+ +R PEES+P+VG+ L LR V N+AAVLGFVGAP+TLA+YVVEG SSK+++ IK++AF +P++LH LL F TS+A Y++YQ D+GAQ VQ+FDSWA +LSP D++ F+ PY K++VD VKQTHPD ILY SGS G+LER+ TGVD++SLDWTVDMAEG RL + VQGNVDPG LFG+ + I +RI+D VRKA +HILNLGHGI GTPEEN FFE K + Sbjct: 91 VESKGPQIGDPIRSLSQVEALRPLQPEESMPFVGEVLGRLRSSVGNQAAVLGFVGAPWTLAAYVVEGKSSKNYAVIKKMAFQEPELLHKLLDHFATSIATYLRYQIDSGAQVVQMFDSWAGQLSPADYDTFAAPYQKKVVDLVKQTHPDTPFILYISGSAGVLERMGRTGVDIISLDWTVDMAEGLARLPDHIGVQGNVDPGLLFGTPEAIRDRIDDCVRKARGRRHILNLGHGILPGTPEENGRAFFEAGKTV 344
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_SYNPW (Uroporphyrinogen decarboxylase OS=Synechococcus sp. (strain WH7803) GN=hemE PE=3 SV=1) HSP 1 Score: 310.842 bits (795), Expect = 5.919e-84 Identity = 154/254 (60.63%), Postives = 192/254 (75.59%), Query Frame = 1 Query: 1 IKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAKAI 762 I+ KGP I DPI T A+VD + +P ES+P+VG+ L LR+ V NEAAVLGFVGAP+TLA+YVVEG SSK+++ IK +AF +P +LH LL F S+A+Y++YQ D+GAQ VQ+FDSWA +LSP D++ F+ PY K++VD VKQTHPD ILY SGS G+LER+A TGVD++SLDWTVDMAE RL + VQGNVDPG LFG+ + I RI+D VRKA KHILNLGHGI GTPEEN A FF K++ Sbjct: 91 IESKGPQIGDPIRTMAQVDALHPLNPAESMPFVGEVLGRLRQSVGNEAAVLGFVGAPWTLAAYVVEGKSSKNYAVIKAMAFQEPALLHKLLDHFAESIAQYLRYQIDSGAQVVQMFDSWAGQLSPADYDTFAAPYQKKVVDLVKQTHPDTPFILYISGSAGVLERMATTGVDIISLDWTVDMAEALARLPEHIGVQGNVDPGLLFGTPEAIEARIDDCVRKARGRKHILNLGHGILPGTPEENGASFFRSGKSV 344
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_PROMA (Uroporphyrinogen decarboxylase OS=Prochlorococcus marinus GN=hemE PE=3 SV=1) HSP 1 Score: 310.842 bits (795), Expect = 5.919e-84 Identity = 152/254 (59.84%), Postives = 193/254 (75.98%), Query Frame = 1 Query: 1 IKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAKAI 762 ++ KGP+I DPI T +V +R +P+ S+P+VG+ L LRE V NEAAVLGFVGAP+TLA+YVVEG SSK++S IK +AF QP +LH LL F S+A Y++YQ ++GAQ VQ+FDSWA +LSP+D++ ++ PY K++VD VKQ+HPD +ILY SGS G++ER+A TGVD+VSLDWTVDMAEG RL ++ +QGNVDPG LFG+ I RI DTV+KA KHILNLGHGI GTPEEN FFE K I Sbjct: 91 VESKGPLINDPIRTLEQVKTLRPLEPQVSLPFVGEVLGRLRESVKNEAAVLGFVGAPWTLAAYVVEGKSSKNYSVIKAMAFQQPDLLHKLLNHFAESIANYLKYQIESGAQVVQMFDSWAGQLSPIDYDNYAAPYQKKVVDLVKQSHPDTPMILYISGSAGVIERMAKTGVDIVSLDWTVDMAEGCARLPNNIGIQGNVDPGILFGTPKMIQERIIDTVKKAKGRKHILNLGHGILPGTPEENAKVFFETGKNI 344
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_ANASP (Uroporphyrinogen decarboxylase OS=Anabaena sp. (strain PCC 7120) GN=hemE PE=3 SV=1) HSP 1 Score: 307.76 bits (787), Expect = 5.011e-83 Identity = 144/253 (56.92%), Postives = 189/253 (74.70%), Query Frame = 1 Query: 4 KGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAKAI 762 +GKGP+I PI T A+++Q+R +PE ++P++ L LR+EV N++ VLGFVGAP+TLA+Y VEG SK +S IK +AFS P +LH LL K ++A Y +YQ D+GAQ VQ+FDSWA +LSP D++ F+LPY +++ +KQTHPD LIL SGS G+LER+ +G D+V++DWTVDMA+ R RLG + VQGN+DPG L+ SK FI +RI DTVRKAG W HILNLGHG+ TPEENVA FFE AK + Sbjct: 94 EGKGPIIHAPIRTQAQIEQLRPLEPEAALPFIKTILQALRQEVGNQSTVLGFVGAPWTLAAYAVEGKGSKTYSIIKNMAFSDPTILHQLLSKLADAIAIYARYQIDSGAQVVQMFDSWAGQLSPQDYDTFALPYQQRVFQQIKQTHPDTPLILLVSGSAGVLERMGQSGADIVTVDWTVDMADARARLGKQMKVQGNLDPGVLYASKQFIRDRIIDTVRKAGNWGHILNLGHGVLPDTPEENVAFFFETAKQL 346
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_TRIEI (Uroporphyrinogen decarboxylase OS=Trichodesmium erythraeum (strain IMS101) GN=hemE PE=3 SV=1) HSP 1 Score: 307.375 bits (786), Expect = 6.544e-83 Identity = 143/254 (56.30%), Postives = 195/254 (76.77%), Query Frame = 1 Query: 1 IKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAKAI 762 I+ KGP+I PI T+A++D++ +PEES+P++ + L LR EV NEAAVLGF+GAP+TLA+Y +EG S K ++ IK++AF QP++LH L K ++A Y +YQ ++GAQ +Q+FDSWA +LSP D+E F+LPY K +V VK+THP+ ILY +GS GLLER+ TGVD+VS+DW+VD+AE R+RLG ++ VQGN+DPG LFGS++FI +RI +T+RKAG HILNLGHG+ TPEENV FF+ AK I Sbjct: 93 IESKGPIIDPPIRTEAQIDKLHPIEPEESLPFIREILQTLRREVKNEAAVLGFIGAPWTLAAYAIEGKSCKDYTNIKKMAFCQPEMLHKFLGKLAEAIAVYARYQINSGAQVIQMFDSWAGQLSPQDYETFALPYQKLVVQEVKKTHPNTPFILYINGSAGLLERMPQTGVDIVSVDWSVDIAEARQRLGNNICVQGNIDPGVLFGSQEFIKSRILETIRKAGNRGHILNLGHGVLKETPEENVEFFFKTAKEI 346
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_NOSP7 (Uroporphyrinogen decarboxylase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=hemE PE=3 SV=1) HSP 1 Score: 307.375 bits (786), Expect = 6.544e-83 Identity = 145/255 (56.86%), Postives = 188/255 (73.73%), Query Frame = 1 Query: 4 KGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAKAIRY 768 +GKGP+I P+ T ++D++ +PE ++P++ L LR EV +++ VLGFVGAP+TLA+Y VEG SK +S IK +AFS P +LH LL K ++A Y +YQ D+GAQ VQ+FDSWA +LSP D++ F+LPY +++ VKQTHPD LIL SGS G+LER+A +G D+VS+DW VDMA+ R RLG V VQGN+DPG LFGSK FI +RI DTVRKAG W HILNLGHG+ TPEENVA FFE AK + + Sbjct: 94 EGKGPIIHSPLRTQEQIDRLHPLEPEAALPFIKTILQALRSEVGDKSTVLGFVGAPWTLAAYAVEGKGSKTYSIIKNMAFSDPTILHQLLTKLADAIAIYARYQIDSGAQVVQMFDSWAGQLSPQDYDTFALPYQQRVFQQVKQTHPDTPLILLVSGSAGVLERMAQSGADIVSVDWAVDMADARARLGKQVKVQGNLDPGVLFGSKQFIRDRILDTVRKAGNWGHILNLGHGVLPETPEENVAFFFETAKELNF 348
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_ANAVT (Uroporphyrinogen decarboxylase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=hemE PE=3 SV=1) HSP 1 Score: 307.375 bits (786), Expect = 6.544e-83 Identity = 144/253 (56.92%), Postives = 190/253 (75.10%), Query Frame = 1 Query: 4 KGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAKAI 762 +GKGP+I PI T A+++Q+R +PE ++P++ L LR+EV +++ VLGFVGAP+TLA+Y VEG SK +S IK LAFS+P +LH LL K ++A Y +YQ D+GAQ VQ+FDSWA +LSP D++ F+LPY +++ +KQTHPD LIL SGS G+LER+ +G D+V++DWTVDMA+ R RLG + VQGN+DPG L+ SK FI +RI DTVRKAG W HILNLGHG+ TPEENVA FFE AK + Sbjct: 94 EGKGPIIHAPIRTQAQIEQLRPLEPEAALPFIKTILQALRQEVGHQSTVLGFVGAPWTLAAYAVEGKGSKTYSIIKNLAFSEPAILHQLLTKLADAIAIYARYQIDSGAQVVQMFDSWAGQLSPQDYDTFALPYQQRVFQQIKQTHPDTPLILLVSGSAGVLERMGQSGADIVTVDWTVDMADARARLGKQMKVQGNLDPGVLYASKQFIRDRIIDTVRKAGNWGHILNLGHGVLPDTPEENVAFFFETAKQL 346
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_SYNS9 (Uroporphyrinogen decarboxylase OS=Synechococcus sp. (strain CC9902) GN=hemE PE=3 SV=1) HSP 1 Score: 306.99 bits (785), Expect = 8.547e-83 Identity = 151/254 (59.45%), Postives = 192/254 (75.59%), Query Frame = 1 Query: 1 IKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAKAI 762 I+ KGP I DPI + +V +R +P ES+P+VG+ L LR+ V N+AAVLGFVGAP+TLA+YVVEG SSK+++ IK +AF +P++LH LL F S+A Y++YQ D+GAQ VQ+FDSWA +LSP D++ F+ PY K++VD VKQTHPD +LY SGS G+LER+A TGVD++SLDWTVDMAE RL + VQGNVDPG LFG+ D I RI+DTVRKA +HILNLGHGI GTPEEN A FF K++ Sbjct: 91 IESKGPQIGDPIRSMEQVKALRPLNPAESMPFVGEVLGRLRKTVGNQAAVLGFVGAPWTLAAYVVEGKSSKNYAVIKAMAFREPELLHTLLNHFAESIANYLRYQIDSGAQVVQMFDSWAGQLSPADYDTFAAPYQKKVVDLVKQTHPDTPFVLYISGSAGVLERMARTGVDIISLDWTVDMAEACARLPEHIGVQGNVDPGLLFGTPDAIQARIDDTVRKARGRRHILNLGHGILPGTPEENGAAFFRSGKSV 344 The following BLAST results are available for this feature:
BLAST of DC900215 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DC900215 ID=DC900215; Name=DC900215; organism=Citrus sinensis; type=EST; length=840bpback to top |