DC900215
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_PROM4 (Uroporphyrinogen decarboxylase OS=Prochlorococcus marinus (strain MIT 9211) GN=hemE PE=3 SV=1) HSP 1 Score: 306.99 bits (785), Expect = 8.547e-83 Identity = 149/254 (58.66%), Postives = 192/254 (75.59%), Query Frame = 1 Query: 1 IKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAKAI 762 ++ KGP+I DPI ++++ +R P ES P+VG+ L LR+ V NEAAVLGFVGAP+TLA+YVVEG SSK+++ IK +AF +P++LH LL F S+A Y+ YQ D+GAQ VQ+FDSWA +LSP+D+E F+ PY K+++D VK+THP+ +ILY SGS G+LER+ TGVD+VSLDWTVDMAEG RL +V +QGNVDPG LFGS + I RI DTV+KA K ILNLGHGI GTPEEN FFE K++ Sbjct: 91 VESKGPLIKDPIRNESQIKTLRALSPSESCPFVGEVLKRLRDSVGNEAAVLGFVGAPWTLAAYVVEGKSSKNYAVIKAMAFQEPELLHKLLDHFADSIANYLCYQIDSGAQVVQMFDSWAGQLSPIDYETFAAPYQKKVIDLVKKTHPETPMILYISGSAGVLERMGRTGVDIVSLDWTVDMAEGCARLPQNVGIQGNVDPGLLFGSPESIRARIIDTVKKAKGRKFILNLGHGILPGTPEENARVFFEAGKSV 344
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_SYNSC (Uroporphyrinogen decarboxylase OS=Synechococcus sp. (strain CC9605) GN=hemE PE=3 SV=1) HSP 1 Score: 306.605 bits (784), Expect = 1.116e-82 Identity = 151/254 (59.45%), Postives = 191/254 (75.20%), Query Frame = 1 Query: 1 IKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAKAI 762 I+ KGP I DPI + A+VD +R +P ES+P+VG+ L LR+ V NEAAVLGFVGAP+TLA+YVVEG SSK+++ IK + F +P++LH LL F S+A Y++YQ D+GAQ VQ+FDSWA +LSP D++ F+ PY K++VD VK+THPD ILY SGS G++ER+A TGVD+VSLDWTVDMAE RL + VQGNVDPG LFG+ + I RI+D VRKA KHILNLGHGI GTPEEN FF K++ Sbjct: 91 IESKGPQIGDPIRSMAQVDALRPLNPSESMPFVGEVLGRLRQSVGNEAAVLGFVGAPWTLAAYVVEGKSSKNYAVIKAMVFREPEILHKLLDHFAESIANYLRYQIDSGAQVVQMFDSWAGQLSPADYDTFAAPYQKKVVDLVKKTHPDTPFILYISGSAGVIERMANTGVDIVSLDWTVDMAEALARLPEHIGVQGNVDPGLLFGTPEAIEARIDDCVRKARGRKHILNLGHGILPGTPEENGEAFFRAGKSV 344
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_SYNPX (Uroporphyrinogen decarboxylase OS=Synechococcus sp. (strain WH8102) GN=hemE PE=3 SV=1) HSP 1 Score: 306.605 bits (784), Expect = 1.116e-82 Identity = 152/254 (59.84%), Postives = 191/254 (75.20%), Query Frame = 1 Query: 1 IKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAKAI 762 I+ KGP I DPI + +V+ +R +P ES+P+VG+ L LRE V NEAAVLGFVGAP+TLA+YVVEG SSK+++ IK +AF +P++LH LL F S+A Y+++Q D+GAQ VQ+FDSWA +LSP D++ F+ PY K++VD VKQTHPD ILY SGS G+LER+A TGVD++SLDWTVDM E RL + VQGNVDPG LFG+ D I RI+D VRKA KHILNLGHGI GTPEEN A FF K++ Sbjct: 91 IESKGPQIGDPIRSMDQVNALRPLNPSESMPFVGEVLGRLRESVGNEAAVLGFVGAPWTLAAYVVEGKSSKNYAVIKAMAFREPELLHKLLDHFAESIANYLRFQIDSGAQVVQMFDSWAGQLSPADYDTFAAPYQKKVVDLVKQTHPDTPFILYISGSAGVLERMATTGVDIISLDWTVDMGEALARLPEHIGVQGNVDPGLLFGTPDAIEARIDDCVRKARGRKHILNLGHGILPGTPEENGAAFFRSGKSV 344
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_SYNR3 (Uroporphyrinogen decarboxylase OS=Synechococcus sp. (strain RCC307) GN=hemE PE=3 SV=1) HSP 1 Score: 300.442 bits (768), Expect = 8.000e-81 Identity = 149/254 (58.66%), Postives = 189/254 (74.41%), Query Frame = 1 Query: 1 IKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAKAI 762 I+ KGP I DPI A+V+ +R P E++P+VG+ L LR V N A VLGFVGAP+TLA+YVVEG SSK+++ IK +AF +P++LH LL F S+A Y++YQ D+GAQ VQ+FDSWA ELSP D++ F+ PY +++V+ VKQTHPD +ILY SGS G+LER+ TGVD +SLDWTVDMA+G RL + VQGNVDPG LFG+ + I RI+DTVRKA +HILNLGHGI GTPEEN A FFE K + Sbjct: 91 IESKGPQINDPIRNLAQVEALRPLVPAETMPFVGEVLGRLRSSVGNNATVLGFVGAPWTLAAYVVEGKSSKNYAVIKAMAFREPEMLHKLLNHFAESIATYLRYQIDSGAQVVQMFDSWAGELSPADYDTFAAPYQRKVVELVKQTHPDTPMILYISGSAGVLERMGRTGVDFISLDWTVDMADGCARLPHHLGVQGNVDPGLLFGTPEAIRVRIDDTVRKARGRRHILNLGHGILPGTPEENGAAFFEAGKTV 344
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_PROM1 (Uroporphyrinogen decarboxylase OS=Prochlorococcus marinus (strain NATL1A) GN=hemE PE=3 SV=1) HSP 1 Score: 300.442 bits (768), Expect = 8.000e-81 Identity = 147/254 (57.87%), Postives = 190/254 (74.80%), Query Frame = 1 Query: 1 IKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAKAI 762 ++ KGP+I DPI + +V ++ PEES+ +VG+ L LRE V N+AAVLGFVGAP+TLA+YVVEG SSK+++ IK +AF +P++LH LL F S+A Y+ YQ +GAQ VQ+FDSWA +LSP D++EF+ PY +++V+ VK+ HPD +ILY SGS G+LER+ TGVD+VSLDWTVDMA+G +RL V VQGNVDPG LFG+ D I +RI D V+KA KHILNLGHGI GTPEEN FFE K + Sbjct: 91 VESKGPLINDPIRSLKQVKDLKPLQPEESMSFVGEVLGRLRESVGNKAAVLGFVGAPWTLAAYVVEGKSSKNYAVIKAMAFQEPELLHQLLNHFAESIANYLSYQIQSGAQVVQMFDSWAGQLSPQDYDEFAAPYQQKVVNLVKEKHPDTPMILYISGSAGVLERMGQTGVDIVSLDWTVDMADGLKRLPQSVGVQGNVDPGLLFGTPDAIRSRIVDVVKKAKGRKHILNLGHGILPGTPEENARVFFEAGKNV 344
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_PROMT (Uroporphyrinogen decarboxylase OS=Prochlorococcus marinus (strain NATL2A) GN=hemE PE=3 SV=1) HSP 1 Score: 300.056 bits (767), Expect = 1.045e-80 Identity = 147/254 (57.87%), Postives = 190/254 (74.80%), Query Frame = 1 Query: 1 IKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAKAI 762 ++ KGP+I DPI + +V ++ PEES+ +VG+ L LRE V N+AAVLGFVGAP+TLA+YVVEG SSK+++ IK +AF +P++LH LL F S+A Y+ YQ +GAQ VQ+FDSWA +LSP D++EF+ PY +++V+ VK+ HPD +ILY SGS G++ER+ TGVD+VSLDWTVDMA+G +RL V VQGNVDPG LFG+ D I +RI D VRKA KHILNLGHGI GTPEEN FFE K + Sbjct: 91 VESKGPLINDPIRSLKQVKDLKPLQPEESMSFVGEVLGRLRESVGNKAAVLGFVGAPWTLAAYVVEGKSSKNYAVIKAMAFQEPELLHQLLNHFAESIANYLSYQIQSGAQVVQMFDSWAGQLSPQDYDEFAAPYQQKVVNLVKEKHPDTPMILYISGSAGVIERMGQTGVDIVSLDWTVDMADGLKRLPQAVGVQGNVDPGLLFGTPDAIRSRIVDVVRKAKGRKHILNLGHGILPGTPEENARVFFEAGKNV 344
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_PROMM (Uroporphyrinogen decarboxylase OS=Prochlorococcus marinus (strain MIT 9313) GN=hemE PE=3 SV=1) HSP 1 Score: 297.36 bits (760), Expect = 6.772e-80 Identity = 143/254 (56.30%), Postives = 189/254 (74.41%), Query Frame = 1 Query: 1 IKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAKAI 762 ++ KGP+I PI + ++++ ++ +P ++P+VG+ L LRE V N+AAVLGFVGAP+TLA+YVVEG SSK+++ IK +AF QP +LH LL F S+A Y++YQ D+GAQ VQ+FDSWA +LSP D++ F+ PY K++VD VK THPD +ILY SGS G+LER+ TGVD++SLDWTVDMA+G RL + VQGNVDPG LFG+ + I RI D VRKA +HILNLGHGI GTPE+N FFE K + Sbjct: 91 VESKGPLIQKPIRSLSQIEALQPLEPNATMPFVGEVLGRLRESVGNKAAVLGFVGAPWTLAAYVVEGKSSKNYAVIKAMAFQQPDLLHRLLNHFAESIATYLRYQIDSGAQVVQMFDSWAGQLSPADYDTFAAPYQKRVVDLVKSTHPDTPMILYISGSAGVLERMGRTGVDIISLDWTVDMADGCARLPEHLGVQGNVDPGLLFGTPEAIRERIVDAVRKARGRRHILNLGHGILPGTPEDNAKVFFETGKTV 344
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_PROM3 (Uroporphyrinogen decarboxylase OS=Prochlorococcus marinus (strain MIT 9303) GN=hemE PE=3 SV=1) HSP 1 Score: 296.204 bits (757), Expect = 1.509e-79 Identity = 143/254 (56.30%), Postives = 188/254 (74.02%), Query Frame = 1 Query: 1 IKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAKAI 762 ++ KGP+I PI + ++++ ++ +P ++P+VG+ L LRE V N AAVLGFVGAP+TLA+YVVEG SSK+++ IK +AF QP +LH LL F S+A Y++YQ D+GAQ VQ+FDSWA +LSP D++ F+ PY K++VD VK THPD +ILY SGS G+LER+ TGVD++SLDWTVDMA+G RL + VQGNVDPG LFG+ + I RI D VRKA +HILNLGHGI GTPE+N FFE K + Sbjct: 91 VESKGPLIQKPIRSLSQIEALQPLEPNATMPFVGEVLGRLRESVGNRAAVLGFVGAPWTLAAYVVEGKSSKNYAVIKAMAFQQPDLLHRLLNHFAESIATYLRYQIDSGAQVVQMFDSWAGQLSPADYDTFAAPYQKRVVDLVKSTHPDTPMILYISGSAGVLERMGRTGVDIISLDWTVDMADGCARLPEHLGVQGNVDPGLLFGTPEAIRERIVDAVRKARGRRHILNLGHGILPGTPEDNAKVFFETGKNV 344
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_PROM9 (Uroporphyrinogen decarboxylase OS=Prochlorococcus marinus (strain MIT 9312) GN=hemE PE=3 SV=1) HSP 1 Score: 295.049 bits (754), Expect = 3.361e-79 Identity = 140/256 (54.69%), Postives = 194/256 (75.78%), Query Frame = 1 Query: 1 IKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAKAIRY 768 I+ KGP+I DPI T ++++ ++E +P ES+ +VG+ L+ L+++VNNEA VLGFVGAP+TLA+YVVEG SSK++S IK +AF +P +LH LL F S+ +Y+++Q +GAQ VQIFDSWA +LSP D++ F+ PY K++VD VK+ +PD +ILY SGS G++ER+A TGVD++SLDWTVD+ E +R+ ++ +QGNVDPG LFG+K+ I RI+DT K K+ILNLGHGI GTPEEN FFE K + Y Sbjct: 91 IESKGPIIEDPIRTLSQIESLKELNPSESLSFVGQVLSSLKKDVNNEATVLGFVGAPWTLAAYVVEGKSSKNYSLIKSMAFKEPDLLHKLLDHFAKSIGEYLKFQIKSGAQVVQIFDSWAGQLSPQDYDIFAGPYQKKVVDIVKEEYPDTPVILYISGSAGVIERMAKTGVDIISLDWTVDIEEACKRIPDEIGIQGNVDPGILFGNKESIKERIDDTFNKIKDRKYILNLGHGILPGTPEENAQTFFEHGKKLTY 346
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_PROMS (Uroporphyrinogen decarboxylase OS=Prochlorococcus marinus (strain AS9601) GN=hemE PE=3 SV=1) HSP 1 Score: 291.582 bits (745), Expect = 3.716e-78 Identity = 141/256 (55.08%), Postives = 191/256 (74.61%), Query Frame = 1 Query: 1 IKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAKAIRY 768 I+ KGP+I DPI T +V+ +RE +P ES+ +VG+ L+ L+++VNNEA +LGFVGAP+TLA+YVVEG SSK++S IK +AF++P +LH LL F S+ +Y++YQ +GAQ VQIFDSWA +LSP D++ F+ PY K++V+ VK +P+ +ILY SGS G+LER+A TGVD++SLDWTVD+ E +R+ + +QGNVDPG LFG+K I RI+DT K K+ILNLGHGI GTPEEN FFE K + Y Sbjct: 91 IESKGPIIEDPIRTLNQVENLRELNPSESLSFVGQVLSSLKKDVNNEATILGFVGAPWTLAAYVVEGKSSKNYSLIKSMAFNEPDLLHKLLDHFAKSIGEYLKYQIKSGAQVVQIFDSWAGQLSPQDYDMFAGPYQKKVVEIVKAEYPETPIILYISGSAGVLERMAKTGVDIISLDWTVDIEEACKRIPRGIGIQGNVDPGILFGNKKSIKERIDDTFNKIKDRKYILNLGHGILPGTPEENAQTFFEHGKKLTY 346 The following BLAST results are available for this feature:
BLAST of DC900215 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DC900215 ID=DC900215; Name=DC900215; organism=Citrus sinensis; type=EST; length=840bpback to top |