DC900215
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_PROMP (Uroporphyrinogen decarboxylase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=hemE PE=3 SV=1) HSP 1 Score: 290.812 bits (743), Expect = 6.339e-78 Identity = 141/256 (55.08%), Postives = 189/256 (73.83%), Query Frame = 1 Query: 1 IKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAKAIRY 768 I+ KGP+I DPI +V++++E P ES+ +VG+ L+ L+++V NEA VLGFVGAP+TLA+YVVEG SSK++S IK +AF +P +LH LL F S+ +Y++YQ +GAQ VQIFDSWA +LSP D++ F+ PY K++VD VK+ PD +ILY SGS G+LER+A TGVD++SLDWTVD+ E +R+ + +QGNVDPG LFG+KD I RI++T K K+ILNLGHGI GTPEEN FFE K + Y Sbjct: 91 IESKGPIIEDPIRNIRQVEKLKELIPNESLSFVGEVLSSLKKDVKNEATVLGFVGAPWTLAAYVVEGKSSKNYSLIKSMAFKEPDLLHKLLDHFAKSIGEYLKYQIKSGAQVVQIFDSWAGQLSPQDYDIFAGPYQKKVVDIVKEEFPDTPIILYISGSAGVLERMAKTGVDIISLDWTVDIEEACKRIPTGIGIQGNVDPGILFGNKDSIKERIDNTFNKVKERKYILNLGHGILPGTPEENAKTFFEHGKKLTY 346
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_PROM0 (Uroporphyrinogen decarboxylase OS=Prochlorococcus marinus (strain MIT 9301) GN=hemE PE=3 SV=1) HSP 1 Score: 290.426 bits (742), Expect = 8.279e-78 Identity = 141/256 (55.08%), Postives = 191/256 (74.61%), Query Frame = 1 Query: 1 IKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAKAIRY 768 I+ KGP+I DPI T +V+ ++E P ES+ +VG+ LT L+++VNNEA VLGFVGAP+TLA+YVVEG SSK++S IK +AF++P +LH LL F S+ +Y++YQ +GAQ VQIFDSWA +LSP D++ F+ PY K++V+ VK +P+ +ILY SGS G+LER+A TGVD++SLDWTVD+ E +R+ + +QGNVDPG LFG+K+ I RI++T K K+ILNLGHGI GTPEEN FFE K + Y Sbjct: 91 IESKGPIIEDPIRTLNQVENLKELSPSESLSFVGEVLTSLKKDVNNEATVLGFVGAPWTLAAYVVEGKSSKNYSLIKSMAFNKPDLLHKLLDHFAKSIGEYLKYQIKSGAQVVQIFDSWAGQLSPQDYDIFAGPYQKKVVEIVKAEYPETPIILYISGSAGVLERMAKTGVDIISLDWTVDIEEACKRIPRGIGIQGNVDPGILFGNKESIKERIDNTFNKIKDRKYILNLGHGILPGTPEENAQTFFEHGKKLTY 346
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_PROM2 (Uroporphyrinogen decarboxylase OS=Prochlorococcus marinus (strain MIT 9215) GN=hemE PE=3 SV=1) HSP 1 Score: 289.656 bits (740), Expect = 1.412e-77 Identity = 138/256 (53.91%), Postives = 190/256 (74.22%), Query Frame = 1 Query: 1 IKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAKAIRY 768 I+ KGP+I DPI +++ ++E +P ES+ +VG+ L+ L+++VNNEA VLGFVGAP+TLA+YVVEG SSK++S IK +AF +P +LH LL F S+ +Y++YQ +GAQ VQIFDSWA +LSP D++ F+ PY K++VD VK HP+ +ILY SGS G++ER+A TG+D++SLDWTVD+ E +R+ + +QGNVDPG LFG+K+ I RI++T K K+ILNLGHGI GTPEEN FFE K + Y Sbjct: 91 IESKGPIIEDPIRNLNQIENLKELNPSESLSFVGQVLSSLKKDVNNEATVLGFVGAPWTLAAYVVEGKSSKNYSLIKSMAFKEPGLLHKLLDHFAKSIGEYLKYQIKSGAQVVQIFDSWAGQLSPEDYDIFAGPYQKKVVDIVKAEHPETPVILYISGSAGVIERMAKTGIDIISLDWTVDIEEACKRIPSGIGIQGNVDPGILFGNKESIKERIDNTFNKTKDRKYILNLGHGILPGTPEENAQTFFEHGKKLTY 346
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_PROM5 (Uroporphyrinogen decarboxylase OS=Prochlorococcus marinus (strain MIT 9515) GN=hemE PE=3 SV=1) HSP 1 Score: 287.345 bits (734), Expect = 7.008e-77 Identity = 139/256 (54.30%), Postives = 190/256 (74.22%), Query Frame = 1 Query: 1 IKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAKAIRY 768 I+ KGP+I +PI +++ ++E P ES+ +VG+ L+ L+++VNNEA VLGFVGAP+TLA+YVVEG SSK++S IK +AF +P +LH LL F S+ +Y++YQ +GAQ VQIFDSWA +LSP D++ F+ PY K++VD VK+ +P+ +ILY SGS GLLER+A TGVD++SLDWTVD+ E +R+ + +QGNVDPG LFG+K+ I RI+ T K+ K+ILNLGHGI GTPEEN FFE K + Y Sbjct: 91 IESKGPIIENPIKNIHQIENLKELVPSESLSFVGEVLSSLKKDVNNEATVLGFVGAPWTLAAYVVEGKSSKNYSLIKSMAFKEPDLLHKLLDHFAKSIGEYLKYQIKSGAQVVQIFDSWAGQLSPQDYDIFAGPYQKKVVDIVKEKYPETPIILYISGSAGLLERMARTGVDIISLDWTVDIEEACKRIPEGIGIQGNVDPGLLFGNKESIKERIDITFNKSKGRKYILNLGHGILPGTPEENAQTFFEHGKKLTY 346
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_GLOVI (Uroporphyrinogen decarboxylase OS=Gloeobacter violaceus GN=hemE PE=3 SV=1) HSP 1 Score: 281.952 bits (720), Expect = 2.944e-75 Identity = 140/254 (55.12%), Postives = 183/254 (72.05%), Query Frame = 1 Query: 1 IKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAKAI 762 ++ +GPVI PI T +V+ VR DPE S+ +V L LR EV A VLGFVGAP+TLA+Y VEG SSK ++ IK++AFS+P +LHALL KF ++A+YV +Q D+GAQAVQ+FD+WA +L+P D+ F+LPY ++IV+ V+Q HP+ LILY + S GLL + +GVDV+SLDWTVDMAE R LGPD+AVQGN+DP L G + I +RI D V KAG HI+NLGHGI TPE+N FFE K++ Sbjct: 88 VESRGPVIDPPIRTREQVEAVRPLDPEASLAFVRTILQTLRREVGEAATVLGFVGAPWTLAAYAVEGKSSKDYALIKQMAFSEPDLLHALLTKFADAIARYVIFQIDSGAQAVQLFDTWAGQLNPADYRAFALPYERRIVEQVRQVHPETPLILYINHSAGLLRHVGESGVDVMSLDWTVDMAEARAILGPDMAVQGNLDPCVLLGDQAQIRSRILDIVEKAGPTGHIMNLGHGILPSTPEDNARFFFETVKSL 341
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_SYNJB (Uroporphyrinogen decarboxylase OS=Synechococcus sp. GN=hemE PE=3 SV=1) HSP 1 Score: 275.789 bits (704), Expect = 2.110e-73 Identity = 136/252 (53.97%), Postives = 181/252 (71.83%), Query Frame = 1 Query: 1 IKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAK 756 ++ +GP+I PI + A+++++R +PEES+P++ L+ LR EV +A +LGFVG+P+TLA Y VEG SSK ++ IK LAF+QP +LH LL K S+A+YV YQ + GAQ VQ+FD+WA +LSPVD+E ++LPY KQIVD VK +P + LILY +GS LLER+ G+DV SLDW DMAE R RLG +AVQGN+DP L GS +FI R + +RKAG HI+NLGHGI TPE NV +FFE + Sbjct: 87 VEHQGPIIDPPIRSQAQIERIRLLEPEESLPFIKTILSTLRREVEGKATLLGFVGSPWTLACYAVEGRSSKDYAHIKSLAFAQPPLLHQLLSKLADSIARYVIYQIEGGAQVVQLFDTWAGQLSPVDYECWALPYQKQIVDQVKARYPQVPLILYINGSAALLERVGKAGIDVFSLDWMSDMAEARARLG-SLAVQGNLDPMVLLGSPEFIRQRTLEVIRKAGSRGHIMNLGHGIHPSTPEANVHYFFETVR 337
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_SYNJA (Uroporphyrinogen decarboxylase OS=Synechococcus sp. (strain JA-3-3Ab) GN=hemE PE=3 SV=1) HSP 1 Score: 273.092 bits (697), Expect = 1.368e-72 Identity = 137/252 (54.37%), Postives = 179/252 (71.03%), Query Frame = 1 Query: 1 IKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAK 756 ++ +GP+I PI + A+V+Q+R +PEES+P++ L+ LR EV +A +LGFVG+P+TLA Y VEG SSK ++ IK LAF+QP+VLH LL K S+A+YV YQ + GAQ VQ+FD+WA +LSP D+E ++LPY KQIVD VK P + LILY +GS LLER+ G+DV SLDW DMAE R RLG +AVQGN+DP L GS FI R + ++KAG HI+NLGHG+ TPE NV HFFE + Sbjct: 103 VEQQGPIIDPPIRSQAQVEQIRLLEPEESLPFIKTILSTLRREVEGKATLLGFVGSPWTLACYAVEGRSSKDYAHIKSLAFTQPQVLHQLLSKLADSIARYVIYQIECGAQVVQLFDTWAGQLSPGDYETWALPYQKQIVDQVKARCPQVPLILYINGSAALLERVGKAGIDVFSLDWMSDMAEARARLG-SLAVQGNLDPMVLLGSPKFIRQRTLEVIQKAGSRGHIMNLGHGVHHTTPEANVHHFFETVR 353
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP1_ORYSJ (Uroporphyrinogen decarboxylase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0622300 PE=2 SV=1) HSP 1 Score: 265.774 bits (678), Expect = 2.184e-70 Identity = 131/255 (51.37%), Postives = 185/255 (72.55%), Query Frame = 1 Query: 10 KGPVIFDPINTDAEVDQVREFDPE--ESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAKAIRY 768 KGPVI P+ ++ +QVRE P E + +VG++L ILR E++ +AA+LGFVGAP+T+A+YVVEGG + ++ IK + + P VL LL ++++Y+ YQ ++GAQ +QIFDSW +L P +E++S PY+KQIV+ +K P++ L+LY +G+GGLLER+ TGVDV+ LDWTVDMA+GRRRLG ++VQGNVDP LF +T+ I+ V+ AG HILNLGHG+ V TPEE VAHFF+V +++RY Sbjct: 135 KGPVIQSPVRSE---EQVRELTPIDFEKLRFVGESLKILRTEIDGQAALLGFVGAPWTIATYVVEGGMTNTYTNIKSMCHTAPNVLRGLLSHLADAISEYIIYQVNSGAQCIQIFDSWGGQLPPHVWEQWSKPYIKQIVNKIKIECPNVPLVLYINGNGGLLERMTDTGVDVIGLDWTVDMADGRRRLGNKISVQGNVDPAFLFSPLPVLTDEIHRVVKSAGPKGHILNLGHGVLVKTPEEAVAHFFDVTRSLRY 386
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP1_ARATH (Uroporphyrinogen decarboxylase 1, chloroplastic OS=Arabidopsis thaliana GN=At3g14930 PE=2 SV=2) HSP 1 Score: 265.003 bits (676), Expect = 3.725e-70 Identity = 130/253 (51.38%), Postives = 179/253 (70.75%), Query Frame = 1 Query: 10 KGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAKAIRY 768 KGPVI PI T+ ++ ++ D E+ + +VG +L ILR EV AAVLGFVGAP+T+A+Y+VEGG+++ ++ IK + + P VL ALL T ++ +YV YQ ++GA +QIFDSW +L+P +E +S PY+++I+ VK+ PD ++ Y +G+GGLLER+ TG DV+ LDWTVDMA+GRRRLG +V+VQGNVDP LF +T I V+ AG HILNLGHG+ VGTPEE VAHFFE A+ + Y Sbjct: 148 KGPVIQSPIRTEEDMKRLHPIDFEK-LQFVGDSLKILRREVGEHAAVLGFVGAPWTIATYIVEGGTTRTYTVIKNMCHTAPDVLRALLSHLTKAITEYVVYQVEHGAHCIQIFDSWGGQLTPEMWERWSKPYIEEIIHAVKKRCPDTPIVFYINGNGGLLERMKGTGADVIGLDWTVDMADGRRRLGSEVSVQGNVDPAYLFSPLPALTEEIERVVKCAGPKGHILNLGHGVLVGTPEEAVAHFFETARNLDY 399
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_THEEB (Uroporphyrinogen decarboxylase OS=Thermosynechococcus elongatus (strain BP-1) GN=hemE PE=3 SV=1) HSP 1 Score: 246.514 bits (628), Expect = 1.371e-64 Identity = 116/254 (45.67%), Postives = 169/254 (66.54%), Query Frame = 1 Query: 1 IKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAKAI 762 ++ KGP+I PI T +V + +PE + P++ L LR+EV + AAVLGF GAP+TLA+Y +EG SSK + +IK +A+ +P +LH L T++A Y+ YQ D GAQ VQ+FDSWA +LS D++ F+ PY KQ++ VK +PD+ +ILY +GS +++R+A TGVD+VSLDWTVD+ R++ P V +QGN+DP LF + + R + + K+I NLGHG+ GTPEENVA F+ K++ Sbjct: 89 VESKGPIIDPPIRTLEQVQHLHPLEPEAACPFIRPILATLRQEVGDRAAVLGFAGAPWTLAAYAIEGKSSKDYIQIKTMAYREPDLLHKFLNHLATAIADYLCYQIDCGAQVVQLFDSWAGQLSRQDYDTFAFPYQKQVIQQVKAVYPDVPIILYINGSAAIVDRMAATGVDIVSLDWTVDLGTIRQQFPPSVGLQGNLDPVILFAPQPVLKERSLAIIEAGRKGKYIFNLGHGVLQGTPEENVAFLFDWVKSL 342 The following BLAST results are available for this feature:
BLAST of DC900215 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DC900215 ID=DC900215; Name=DC900215; organism=Citrus sinensis; type=EST; length=840bpback to top |