DC900215
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_RICBR (Uroporphyrinogen decarboxylase OS=Rickettsia bellii (strain RML369-C) GN=hemE PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.811e-24 Identity = 65/218 (29.82%), Postives = 113/218 (51.83%), Query Frame = 1 Query: 118 LREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLER-LALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAKAIRY 768 +R+E+ +++GF G+P+T+ +Y++EG + F K+ + + LL T ++ Q +GA ++IFDSWA L +F++F + K+I+ ++K PD+ +I + G+G L E+ L D++++D + + E + V VQGN+DP L +K I +I+ + I NLGHGI TP ENV + + Y Sbjct: 123 VRKELPKSTSLIGFAGSPWTVMTYMLEGKGKQDFRVSKKFIYENKDLAKELLNFITEKTIHHLINQIKSGANIIKIFDSWAGILPEEEFKKFVIEPTKKIIKSIKGYFPDIPIITFPKGAGLLYEKFLEEVPTDIIAIDPLIPL-EKMKLWSNKVTVQGNLDPVILLTNKKIIKEKIHKILSIMENKNFIFNLGHGILPETPPENVEFLVKCIREYEY 339
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_RICB8 (Uroporphyrinogen decarboxylase OS=Rickettsia bellii (strain OSU 85-389) GN=hemE PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.811e-24 Identity = 65/218 (29.82%), Postives = 113/218 (51.83%), Query Frame = 1 Query: 118 LREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLER-LALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAKAIRY 768 +R+E+ +++GF G+P+T+ +Y++EG + F K+ + + LL T ++ Q +GA ++IFDSWA L +F++F + K+I+ ++K PD+ +I + G+G L E+ L D++++D + + E + V VQGN+DP L +K I +I+ + I NLGHGI TP ENV + + Y Sbjct: 123 VRKELPKSTSLIGFAGSPWTVMTYMLEGKGKQDFRVSKKFIYENKDLAKELLNFITEKTIHHLINQIKSGANIIKIFDSWAGILPEEEFKKFVIEPTKKIIKSIKGYFPDIPIITFPKGAGLLYEKFLEEVPTDIIAIDPLIPL-EKMKLWSNKVTVQGNLDPVILLTNKKIIKEKIHKILSIMENKNFIFNLGHGILPETPPENVEFLVKCIREYEY 339
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_CAUCR (Uroporphyrinogen decarboxylase OS=Caulobacter crescentus GN=hemE PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.366e-24 Identity = 74/248 (29.84%), Postives = 133/248 (53.63%), Query Frame = 1 Query: 7 GKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLAL-TGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFE 747 G+GP + D + ++ ++ E +++ VG+ LT +R ++ + A++GF GAP+T+A+Y++E GSS S + A+ P+ L AL++ + Y+ Q D GAQA+++F+SWA LS F+ +I++ ++ + +I + G+G L+E A T V V+LD + G + + +QG +DP L D + R+++ + + + +I NLGHGI TP +V E Sbjct: 99 GEGPKLGDMPSVESMAEKAGEAG--KALSLVGETLTRVRSALDPDKALIGFAGAPWTVATYMIEKGSSDR-SGARTFAYQNPETLDALIQVLVDATIDYLAMQVDAGAQALKLFESWAEGLSEPLFDRLVTQPHIRIIEGLRARGVTVPIIGFPRGAGTLVEDYAARTPVQGVALDTSASAKLG-QTIQKTKTIQGALDPLLLRAGGDALLKRVDEMLEQWNQGPYIFNLGHGILPDTPIAHVEAVLE 342
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_CAUCN (Uroporphyrinogen decarboxylase OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=hemE PE=3 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 2.366e-24 Identity = 74/248 (29.84%), Postives = 133/248 (53.63%), Query Frame = 1 Query: 7 GKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLAL-TGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFE 747 G+GP + D + ++ ++ E +++ VG+ LT +R ++ + A++GF GAP+T+A+Y++E GSS S + A+ P+ L AL++ + Y+ Q D GAQA+++F+SWA LS F+ +I++ ++ + +I + G+G L+E A T V V+LD + G + + +QG +DP L D + R+++ + + + +I NLGHGI TP +V E Sbjct: 99 GEGPKLGDMPSVESMAEKAGEAG--KALSLVGETLTRVRSALDPDKALIGFAGAPWTVATYMIEKGSSDR-SGARTFAYQNPETLDALIQVLVDATIDYLAMQVDAGAQALKLFESWAEGLSEPLFDRLVTQPHIRIIEGLRARGVTVPIIGFPRGAGTLVEDYAARTPVQGVALDTSASAKLG-QTIQKTKTIQGALDPLLLRAGGDALLKRVDEMLEQWNQGPYIFNLGHGILPDTPIAHVEAVLE 342
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_RHOSK (Uroporphyrinogen decarboxylase OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=hemE PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 8.990e-24 Identity = 70/235 (29.79%), Postives = 110/235 (46.81%), Query Frame = 1 Query: 73 DPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSG-GLLERLALTGVDVVSLD------WTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAK 756 D E++ V + IL E+ E +GF G P+T+A+Y++ G SK + +L + AL+ + T + +Y+ Q + G + V++FDSWA L DFE+F++ K+IV +K P L +I + +G G + TG D V++D W + + R VQGN+DP + + + V HI NLGHGI ENV E + Sbjct: 112 DIHETLAPVYETCRILARELPKETTFIGFAGMPWTVATYMIAGRGSKDQAAAHKLKDTDRPAFEALMDRVTEATIEYLAKQVEAGCEVVKLFDSWAGSLKGQDFEDFAVAPAKRIVSELKARFPGLPVIAFPREAGEGYIGFAEKTGADCVAIDNSVSPEWAAEKVQAGR-----TCVQGNLDPKYMVTGGEELVQATKRVVEAFRNGPHIFNLGHGITPEADPENVTLLVETIR 341
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_RHOS1 (Uroporphyrinogen decarboxylase OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=hemE PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 8.990e-24 Identity = 70/235 (29.79%), Postives = 110/235 (46.81%), Query Frame = 1 Query: 73 DPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSG-GLLERLALTGVDVVSLD------WTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAK 756 D E++ V + IL E+ E +GF G P+T+A+Y++ G SK + +L + AL+ + T + +Y+ Q + G + V++FDSWA L DFE+F++ K+IV +K P L +I + +G G + TG D V++D W + + R VQGN+DP + + + V HI NLGHGI ENV E + Sbjct: 112 DIHETLAPVYETCRILARELPKETTFIGFAGMPWTVATYMIAGRGSKDQAAAHKLKDTDRPAFEALMDRVTEATIEYLAKQVEAGCEVVKLFDSWAGSLKGQDFEDFAVAPAKRIVSELKARFPGLPVIAFPREAGEGYIGFAEKTGADCVAIDNSVSPEWAAEKVQAGR-----TCVQGNLDPKYMVTGGEELVQATKRVVEAFRNGPHIFNLGHGITPEADPENVTLLVETIR 341
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_CHLMU (Uroporphyrinogen decarboxylase OS=Chlamydia muridarum GN=hemE PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.416e-23 Identity = 73/222 (32.88%), Postives = 114/222 (51.35%), Query Frame = 1 Query: 73 DPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQ-THPDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKH-ILNLGHGIKVGTPEENV 732 DP + ++ +A+ L + + ++ F +PFTLASY++EGG+SK SK + P ALL + A Y+Q Q GA AVQ+F+S + L P F ++ + +++ +KQ +P +SL L L TG D + D+ V+++E R+LG ++QGN DP L +D + + + + H I NLGHGI TP ENV Sbjct: 104 DPFSTFSFLIEAIQKLTKRLT--VPLIAFAASPFTLASYLIEGGASKDCSKTIAFLYQYPDKFEALLNEIIKGTAIYLQLQVQAGASAVQLFESSSLRLPPSLFSKYVVSPNAKLIRLIKQRENPPVSLFCRCFYQEFL--SLYATGADTLHPDYHVELSEIYRQLGDPGSIQGNFDPALLLLPQDLLIAHLETYLAPLKQQSHYIFNLGHGILPQTPLENV 321
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_PHEZH (Uroporphyrinogen decarboxylase OS=Phenylobacterium zucineum (strain HLK1) GN=hemE PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.462e-23 Identity = 80/245 (32.65%), Postives = 125/245 (51.02%), Query Frame = 1 Query: 7 GKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDV--VSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVA 735 G+GP + + +A DQV S VG+ L +R E+ + A++GF GAP+T+A+Y++E S+ + A++ P L ALL + A+Y+ QA GAQA+++F+SWA LS FE + IV+ V+ + +I + G+G +E A GV V ++LD A GRR +QG +D L + R++ + + G I NLGHG+ TP EN+A Sbjct: 93 GEGPKLGELPPIEALRDQVEASTGRLSA--VGETLARVRAELEPDRALIGFAGAPWTVATYMLERKGSER-EAARAYAYAHPDELDALLDVLVDATARYLVMQAKAGAQALKLFESWAESLSEDVFERIVVRPHAAIVEKVRAAGVTVPIIGFPRGAGAQVETYA-EGVPVEGIALDVQATAALGRRLQAQGRCIQGALDNLLLREGGPALDARVDQLLAQWGDGPWIFNLGHGVLPDTPIENIA 333
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_RHOS4 (Uroporphyrinogen decarboxylase OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=hemE PE=1 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 7.610e-23 Identity = 69/235 (29.36%), Postives = 109/235 (46.38%), Query Frame = 1 Query: 73 DPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSG-GLLERLALTGVDVVSLD------WTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAK 756 D E++ V + IL E+ E +GF G P+T+A+Y++ G SK + +L + AL+ + T + +Y+ Q + G + V++FDSWA L DFE+F++ K+IV +K L +I + +G G + TG D V++D W + + R VQGN+DP + + + V HI NLGHGI ENV E + Sbjct: 112 DIHETLAPVYETCRILARELPKETTFIGFAGMPWTVATYMIAGRGSKDQAAAHKLKDTDRPAFEALMDRVTEATIEYLAKQVEAGCEVVKLFDSWAGSLKGQDFEDFAVAPAKRIVSELKARFQGLPVIAFPREAGEGYIGFAEKTGADCVAIDNSVSPEWAAEKVQAGR-----TCVQGNLDPKYMVTGGEELVQATKRVVEAFRNGPHIFNLGHGITPEADPENVTLLVETIR 341
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_RICPR (Uroporphyrinogen decarboxylase OS=Rickettsia prowazekii GN=hemE PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.695e-22 Identity = 65/226 (28.76%), Postives = 115/226 (50.88%), Query Frame = 1 Query: 58 QVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLER-LALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENV 732 Q + D + V K + ++E++ + +++GF G+P+T+ SY++EG + F K+ + + LL T + Y+ Q +G ++IFDSW+ L+ DF EF + K+I+ VK+ +I + G+G L E+ + +D++++D V + E + V +QGN+DP L +K+ I + ++ I NLGHGI T ENV Sbjct: 102 QYLQRDSNNKLEKVYKIIKKVKEKLPSNTSLIGFAGSPWTVMSYMLEGKGKRDFRTSKKFIYENKILAKDLLNFITEKTSDYLINQVKSGVDLLKIFDSWSGVLAEDDFTEFVIEPTKKIILKVKEVFVKTPIITFPKGAGLLYEKFIEEVPIDILAVDQMVPL-EKMKEWSNKVIIQGNLDPVILLTNKEIIKEKTYKILQAMKGKNFIFNLGHGILPETHPENV 326 The following BLAST results are available for this feature:
BLAST of DC900215 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900215 ID=DC900215; Name=DC900215; organism=Citrus sinensis; type=EST; length=840bpback to top |