DC900215
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_GEOMG (Uroporphyrinogen decarboxylase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=hemE PE=3 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 1.127e-50 Identity = 105/246 (42.68%), Postives = 154/246 (62.60%), Query Frame = 1 Query: 13 GPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTV-RKAGRWKHILNLGHGIKVGTPEENVAHFFE 747 GPV P+ T A+V+++R +PEE VPYV + ILR+E+ ++GF GAPFTLA Y+VEG SK ++ IKR+ ++ P+V AL+ K T +Y+ Q GAQA+QIFD+W LSP D+E+F LPY +++++ + + + +I + G+G +LE + G DV+ LDW V++ + R LGP++AVQGN+DP L+ K+ I + + AGR HI NLGHGI P EN H E Sbjct: 89 GPVFETPVRTMADVERLRIPNPEEDVPYVLDTIKILRKELAGRVPLIGFGGAPFTLACYMVEGKGSKDWATIKRMMYAAPEVYAALMDKVTMMDMEYLNAQIRAGAQAIQIFDTWGGVLSPTDYEKFVLPYTRKLINGLNR--QNTPVIHFVKGAGTMLETVQKAGGDVMGLDWHVNLGKARDVLGPNMAVQGNLDPTVLYAPKEVIEVEVKRVLDENAGRPGHIFNLGHGILPTVPPENAIHMVE 332
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_ALISL (Uroporphyrinogen decarboxylase OS=Aliivibrio salmonicida (strain LFI1238) GN=hemE PE=3 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 4.281e-50 Identity = 97/251 (38.65%), Postives = 157/251 (62.55%), Query Frame = 1 Query: 7 GKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPD--LSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGR--WKHILNLGHGIKVGTPEENVAHFFE 747 G+GP PI A+VD++ DPE + YV A+ +R+++ E ++GF G+P+TLA+Y+VEGGSSK F+KIK++ +++P +LH LL K ++ +Y+ Q GAQ+V +FD+W L+P D+ EFSL Y+ +IVD + + + + + L+ G LE++A TG D + LDWT+++A+ ++R+G VA+QGN+DP L+ + I ++ + G H+ NLGHGI + P EN F + Sbjct: 94 GEGPKFERPITCKADVDKIGIPDPEGELQYVMNAVRQIRKDLKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPAILHLLLDKLADTVIEYLNAQIKAGAQSVMVFDTWGGVLTPRDYNEFSLRYMHKIVDALIRENEGRRVPVTLFTKNGGMWLEQIAATGCDAIGLDWTINIADAKKRIGDKVALQGNMDPSILYAQPERIRQEVSTILEGFGNEGTGHVFNLGHGIHLDVPPENAGVFVD 344
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_ACTPJ (Uroporphyrinogen decarboxylase OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=hemE PE=3 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 4.281e-50 Identity = 102/250 (40.80%), Postives = 154/250 (61.60%), Query Frame = 1 Query: 7 GKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHP--DLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWK-HILNLGHGIKVGTPEENVAHFFE 747 G+GP PI A+VD + DPE + YV A+ +R E+ E ++GF G+P+TLA+Y+VEGGSSK F+KIK++ ++ P++LHALL K S+ Y+ Q GAQAV +FD+W L+ +++ FSL Y+ +IVD + + + + + L+ G G LE +A TG D V LDWT+D+A+ RRR+G VA+QGN+DP L+ + I + + G+ H+ NLGHGI PE++ F + Sbjct: 94 GEGPKFARPIENKAQVDNLPIPDPESELQYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYADPQILHALLDKLADSVILYLNAQIKAGAQAVMVFDTWGGVLAHNEYKAFSLRYMHKIVDGLIRENEGRKVPVTLFTKGGGLWLEAIAETGCDAVGLDWTIDIADARRRVGHKVALQGNMDPSVLYAQPERIEQEVKQILAGFGQGSGHVFNLGHGIHQDVPEQSPKVFVD 343
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_VIBPA (Uroporphyrinogen decarboxylase OS=Vibrio parahaemolyticus GN=hemE PE=3 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 5.592e-50 Identity = 100/251 (39.84%), Postives = 157/251 (62.55%), Query Frame = 1 Query: 7 GKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPD--LSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAG--RWKHILNLGHGIKVGTPEENVAHFFE 747 G+GPV +PI A+V+++ DPE + YV A+ +R+++N + ++GF G+P+TLA+Y+VEGGSSK F+KIK++ +++P+ LH LL K S+ Y+ Q GAQ+V +FD+W L+P D+ FSL Y+ +IVD + + + + + L+ G LE++A TG D V LDWT+++A+ + R+G VA+QGN+DP L+ S + I + + G H+ NLGHGI + P EN F E Sbjct: 94 GEGPVFDNPITCKADVEKIGLPDPEGELQYVMNAVRQIRKDLNGDVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPQTLHLLLDKLADSVIDYLNAQIKAGAQSVMVFDTWGGVLTPRDYNLFSLQYMHKIVDGLIRENDGRRVPVTLFTKNGGMWLEQIAATGCDAVGLDWTINIADAKARIGDKVALQGNMDPSMLYASPERIREEVAGILEGFGDAGTGHVFNLGHGIHLDVPPENAGVFVE 344
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_VIBHB (Uroporphyrinogen decarboxylase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=hemE PE=3 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 5.592e-50 Identity = 100/251 (39.84%), Postives = 157/251 (62.55%), Query Frame = 1 Query: 7 GKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPD--LSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAG--RWKHILNLGHGIKVGTPEENVAHFFE 747 G+GPV PI A+V+++ DPE + YV A+ +R+++N + ++GF G+P+TLA+Y+VEGGSSK F+KIK++ +++P+ LH LL K S+ +Y+ Q GAQ+V +FD+W L+P D+ FSL Y+ +IVD + + + + + L+ G LE++A TG D V LDWT+++A+ + R+G VA+QGN+DP L+ S + I + + G H+ NLGHGI + P EN F E Sbjct: 94 GEGPVFDKPITCKADVEKIGLPDPEGELQYVMNAVRQIRKDLNGDVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPQTLHLLLDKLADSVIEYLNAQIKAGAQSVMVFDTWGGVLTPRDYNLFSLQYMHKIVDGLIRENDGRRVPVTLFTKNGGMWLEQIAATGCDAVGLDWTINIADAKARIGDKVALQGNMDPSMLYASPERIREEVAGILEGFGDAGTGHVFNLGHGIHLDVPPENAGVFVE 344
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_PSEHT (Uroporphyrinogen decarboxylase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=hemE PE=3 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 7.303e-50 Identity = 98/248 (39.52%), Postives = 154/248 (62.10%), Query Frame = 1 Query: 7 GKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPD--LSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWK-HILNLGHGIKVGTPEENVAHF 741 G+GP PI++ ++V ++ + DP + + YV A++ +R E+ E ++GF G+P+TLA+Y+VEGGSSK F KIK++AF++P+ LH LL K S+ Y+ Q GAQ++ +FDSW LSP D+ EFSL Y+ +IVD + + + + + L+ G +E +A TG D + LDWT+++++ +RR+G VA+QGN+DP L G+ + I + + G H+ NLGHGI EN F Sbjct: 94 GEGPKFERPISSLSDVKKIPKLDPNDDLGYVMNAVSTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKVFGKIKKMAFAEPQTLHLLLDKLADSVIDYLNAQIKAGAQSLMVFDSWGGVLSPRDYNEFSLQYMHKIVDGLIREYDGRRVPVTLFTKNGGQWIEAIAATGCDAIGLDWTINISDAKRRVGDKVALQGNMDPSMLHGTPERIRQEVATILEDFGTGNGHVFNLGHGITPDVDPENAGVF 341
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_COLP3 (Uroporphyrinogen decarboxylase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=hemE PE=3 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 7.303e-50 Identity = 100/251 (39.84%), Postives = 151/251 (60.16%), Query Frame = 1 Query: 7 GKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHP--DLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGR--WKHILNLGHGIKVGTPEENVAHFFE 747 G+GP PI A+VD++ DPE+ + YV A+ +R+E+ E ++GF G+P+TLA+Y++EGGSSK F+KIK++ F++P+ LH LL K S+ Y+ Q GAQ+V +FD+W LSP D+ EFSL Y+ +IVD + + + + + L+ G LE +A TG D V LDWT+D+ + R+G VA+QGN+DP L+ I ++ + G H+ NLGHGI ++ HF E Sbjct: 94 GEGPKFERPITCKADVDKIAVPDPEDELGYVMNAVRTIRKELKGEVPLIGFSGSPWTLATYMIEGGSSKAFTKIKKMMFAEPQTLHLLLDKLADSVISYLNAQIAAGAQSVMVFDTWGGVLSPRDYNEFSLQYMAKIVDGLTRHNEGRQVPVTLFTKNGGMWLESIAATGCDAVGLDWTIDIENAKARVGDKVALQGNMDPSMLYAPLPRIEQEVSKILSGFGEGGTGHVFNLGHGIHPDVNPDHAGHFIE 344
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_PSYIN (Uroporphyrinogen decarboxylase OS=Psychromonas ingrahamii (strain 37) GN=hemE PE=3 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 9.538e-50 Identity = 98/245 (40.00%), Postives = 152/245 (62.04%), Query Frame = 1 Query: 4 KGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTH--PDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWK-HILNLGHGIKVGTPEEN 729 +G+GP + PI +VD + DPE + YV A+ +R E+ ++GF G+P+TLA+Y+VEGGSSK F+KIK++AF +P++LH LL K S+ Y+ Q GAQ+V +FD+W LSP D+++FSL Y+ +IV +++++ + + L+ G LE +A TG D + LDWT+DMA + R+G V +QGN+DP L+ + + I + + G+ H+ NLGHGI + P EN Sbjct: 93 EGEGPKLKRPITCKKDVDNLIMPDPEGELQYVMNAVRTIRRELKGSVPLIGFAGSPWTLATYMVEGGSSKAFTKIKKMAFCEPQLLHTLLDKLADSVIDYLNAQIAAGAQSVMVFDTWGGVLSPRDYKDFSLQYMTKIVAGLQRSYEGQKIPVTLFTKNGGQWLEAIADTGCDAIGLDWTIDMASAKARVGDRVVLQGNMDPSMLYATPERIRQEVATILASFGKGNGHVFNLGHGIHLDVPPEN 337
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_ERWCT (Uroporphyrinogen decarboxylase OS=Erwinia carotovora subsp. atroseptica GN=hemE PE=3 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 1.246e-49 Identity = 103/250 (41.20%), Postives = 154/250 (61.60%), Query Frame = 1 Query: 7 GKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPD--LSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWK-HILNLGHGIKVGTPEENVAHFFE 747 G+GP PI + A+V ++ DPE+ + YV A+ +R+ + E ++GF G+P+TLA+Y+VEGGSSK F+ IK++ F++PK LH LL K S+ Y+ Q GAQAV +FD+W LS D++EFSL Y+ +IVD++++ + + + L+ G G LE +A TG D + LDWT D+A+ RRR+G VA+QGN+DP L+ I + + G+ H+ NLGHGI P E+ F E Sbjct: 94 GEGPRFHSPITSHADVVKLPVPDPEQELGYVMNAVRTIRKNLAGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMFAEPKTLHLLLDKLADSVILYLNAQIRAGAQAVMVFDTWGGALSGRDYKEFSLHYMHKIVDSLQRENEGRRVPVTLFTKGGGQWLEAMAETGCDALGLDWTSDIADARRRVGDKVALQGNMDPSMLYADPARIEQEVASILAGFGQGNGHVFNLGHGIHQDVPPEHAGVFVE 343
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_SHELP (Uroporphyrinogen decarboxylase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=hemE PE=3 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 1.627e-49 Identity = 104/251 (41.43%), Postives = 154/251 (61.35%), Query Frame = 1 Query: 7 GKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPD---LSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWK-HILNLGHGIKVGTPEENVAHFFE 747 G+GP P +T + ++ DPE+ + YV KA++ +R E+ E ++GF G+P+TLA+Y+VEGGSSK F KIK++A+++P LH LL K ++ Y+ Q NGAQ++ IFDSW LS + EFSL Y+++IVD + + H D + + L+ G G LE +A TG D + LDWTVD+A+ RRR+G VA+QGN+DP L+ S + I + + G H+ NLGHGI E+ F + Sbjct: 94 GEGPRFERPTDTLDAIKKLAVPDPEDELGYVMKAVSTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKTFEKIKKMAYAEPAALHMLLDKLADAVTLYLNAQVANGAQSLMIFDSWGGALSHTAYREFSLRYMQKIVDGLTR-HADGRQVPVTLFTKGGGLWLEAMAETGCDALGLDWTVDIADARRRVGHKVALQGNMDPSMLYASPERIHEEVRQILAGYGEGSGHVFNLGHGIHQHVDPEHAGAFIK 343 The following BLAST results are available for this feature:
BLAST of DC900215 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DC900215 ID=DC900215; Name=DC900215; organism=Citrus sinensis; type=EST; length=840bpback to top |