DC900215
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_PHOPR (Uroporphyrinogen decarboxylase OS=Photobacterium profundum GN=hemE PE=3 SV=2) HSP 1 Score: 196.438 bits (498), Expect = 1.627e-49 Identity = 99/251 (39.44%), Postives = 154/251 (61.35%), Query Frame = 1 Query: 7 GKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPD--LSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAG--RWKHILNLGHGIKVGTPEENVAHFFE 747 G+GP PI A+VD++ DPE + YV A+ +R+++ E ++GF G+P+TLA+Y+VEGGSSK F+KIK++ +++P LH LL K S+ +Y+ Q GAQ+V +FD+W L+P D+ EFSL Y+ +IVD + + + + + L+ G LE++A TG D + LDWT+++A+ RR+G VA+QGN+DP L+ + I + + G H+ NLGHGI + P EN F + Sbjct: 94 GEGPKFERPITCKADVDKIGLPDPEGELQYVMNAVRQIRKDLQGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPATLHLLLDKLADSVVEYLNAQIKAGAQSVMVFDTWGGVLTPSDYNEFSLRYMHKIVDGLIRENDGHRVPVTLFTKNGGMWLEQIAATGCDAIGLDWTINIADANRRVGDKVALQGNMDPSILYAQPERIRQEVATILEGYGDEGTGHVFNLGHGIHLDVPPENAGVFVD 344
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_ECO5E (Uroporphyrinogen decarboxylase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=hemE PE=3 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 1.627e-49 Identity = 103/250 (41.20%), Postives = 153/250 (61.20%), Query Frame = 1 Query: 7 GKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPD--LSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWK-HILNLGHGIKVGTPEENVAHFFE 747 G+GP P+ A+VD++ DPE+ + YV A+ +R E+ E ++GF G+P+TLA+Y+VEGGSSK F+ IK++ ++ P+ LHALL K S+A Y+ Q GAQAV IFD+W L+ D+++FSL Y+ +IVD + + + + + L+ G G LE +A TG D + LDWT D+A+ RRR+G VA+QGN+DP L+ I + + G + H+ NLGHGI P E+ F E Sbjct: 94 GEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDKLAKSVALYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDGRRVPVTLFTKGGGQWLEAMAETGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLYAPPARIEEEVATILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVE 343
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_ECO57 (Uroporphyrinogen decarboxylase OS=Escherichia coli O157:H7 GN=hemE PE=3 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 1.627e-49 Identity = 103/250 (41.20%), Postives = 153/250 (61.20%), Query Frame = 1 Query: 7 GKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPD--LSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWK-HILNLGHGIKVGTPEENVAHFFE 747 G+GP P+ A+VD++ DPE+ + YV A+ +R E+ E ++GF G+P+TLA+Y+VEGGSSK F+ IK++ ++ P+ LHALL K S+A Y+ Q GAQAV IFD+W L+ D+++FSL Y+ +IVD + + + + + L+ G G LE +A TG D + LDWT D+A+ RRR+G VA+QGN+DP L+ I + + G + H+ NLGHGI P E+ F E Sbjct: 94 GEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDKLAKSVALYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDGRRVPVTLFTKGGGQWLEAMAETGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLYAPPARIEEEVATILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVE 343
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_ERWT9 (Uroporphyrinogen decarboxylase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=hemE PE=3 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 3.624e-49 Identity = 100/250 (40.00%), Postives = 153/250 (61.20%), Query Frame = 1 Query: 7 GKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPD--LSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWK-HILNLGHGIKVGTPEENVAHFFE 747 G+GP P+ A+V+++ DPE+ + YV A+ +R+ +N E ++GF G+P+TLA+Y+VEGGSSK F+K+K++ +++P+ LH +L K S+ Y+ Q GAQ+V IFD+W L+ D+ EFSL Y+ +IVD + + + + + L+ G G LE +A TG D + LDWT D+A+ RRR+G VA+QGN+DP L+ S I + + G H+ NLGHGI P E+ F E Sbjct: 94 GEGPRFSSPVTCRADVEKLPIPDPEQELGYVMNAVRTIRKNLNGEVPLIGFSGSPWTLATYMVEGGSSKAFTKLKKMMYAEPQTLHLMLDKLADSVTLYLNAQIRAGAQSVMIFDTWGGVLTGRDYLEFSLNYMHKIVDGLLRENDGRRVPVTLFTKGGGQWLEAMAATGCDALGLDWTTDLADARRRVGDRVALQGNMDPSMLYASPARIEQEVAGILEGYGHGNGHVFNLGHGIHQDVPPEHAGAFVE 343
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_ENT38 (Uroporphyrinogen decarboxylase OS=Enterobacter sp. (strain 638) GN=hemE PE=3 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 3.624e-49 Identity = 100/250 (40.00%), Postives = 153/250 (61.20%), Query Frame = 1 Query: 7 GKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPD--LSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWK-HILNLGHGIKVGTPEENVAHFFE 747 G+GP PI + A++D++ DPE + YV A+ +R E+ E ++GF G+P+TLA+Y+VEGGSSK F+ IK++ +++P LHALL K S+ Y+ Q GAQ+V IFD+W L+ D+++FSL Y+ +I+D + + + + + L+ G G LE +A TG D + LDWT D+A+ RRR+G VA+QGN+DP L+ I + + G+ + H+ NLGHGI P E+ F E Sbjct: 94 GEGPRFTSPIKSKADIDKLPIPDPEGELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYAEPMALHALLDKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIIDGLLRENEGRRVPVTLFTKGGGQWLEAMAATGCDALGLDWTTDIADARRRVGDTVALQGNMDPSMLYAQPARIEEEVASILAGFGQGEGHVFNLGHGIHQDVPPEHAGAFVE 343
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_ECOUT (Uroporphyrinogen decarboxylase OS=Escherichia coli (strain UTI89 / UPEC) GN=hemE PE=3 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 3.624e-49 Identity = 102/250 (40.80%), Postives = 152/250 (60.80%), Query Frame = 1 Query: 7 GKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPD--LSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWK-HILNLGHGIKVGTPEENVAHFFE 747 G+GP P+ A+VD++ DPE+ + YV A+ +R E+ E ++GF G+P+TLA+Y+VEGGSSK F+ IK++ ++ P+ LHALL K S+ Y+ Q GAQAV IFD+W L+ D+++FSL Y+ +IVD + + + + + L+ G G LE +A TG D + LDWT D+A+ RRR+G VA+QGN+DP L+ I + + G + H+ NLGHGI P E+ F E Sbjct: 94 GEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDGRRVPVTLFTKGGGQWLEAMAETGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLYAPPARIEEEVASILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVE 343
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_ECOL6 (Uroporphyrinogen decarboxylase OS=Escherichia coli O6 GN=hemE PE=3 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 3.624e-49 Identity = 102/250 (40.80%), Postives = 152/250 (60.80%), Query Frame = 1 Query: 7 GKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPD--LSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWK-HILNLGHGIKVGTPEENVAHFFE 747 G+GP P+ A+VD++ DPE+ + YV A+ +R E+ E ++GF G+P+TLA+Y+VEGGSSK F+ IK++ ++ P+ LHALL K S+ Y+ Q GAQAV IFD+W L+ D+++FSL Y+ +IVD + + + + + L+ G G LE +A TG D + LDWT D+A+ RRR+G VA+QGN+DP L+ I + + G + H+ NLGHGI P E+ F E Sbjct: 94 GEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDGRRVPVTLFTKGGGQWLEAMAETGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLYAPPARIEEEVASILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVE 343
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_ECOK1 (Uroporphyrinogen decarboxylase OS=Escherichia coli O1:K1 / APEC GN=hemE PE=3 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 3.624e-49 Identity = 102/250 (40.80%), Postives = 152/250 (60.80%), Query Frame = 1 Query: 7 GKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPD--LSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWK-HILNLGHGIKVGTPEENVAHFFE 747 G+GP P+ A+VD++ DPE+ + YV A+ +R E+ E ++GF G+P+TLA+Y+VEGGSSK F+ IK++ ++ P+ LHALL K S+ Y+ Q GAQAV IFD+W L+ D+++FSL Y+ +IVD + + + + + L+ G G LE +A TG D + LDWT D+A+ RRR+G VA+QGN+DP L+ I + + G + H+ NLGHGI P E+ F E Sbjct: 94 GEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDGRRVPVTLFTKGGGQWLEAMAETGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLYAPPARIEEEVASILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVE 343
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_ECO7I (Uroporphyrinogen decarboxylase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=hemE PE=3 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 3.624e-49 Identity = 102/250 (40.80%), Postives = 152/250 (60.80%), Query Frame = 1 Query: 7 GKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPD--LSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWK-HILNLGHGIKVGTPEENVAHFFE 747 G+GP P+ A+VD++ DPE+ + YV A+ +R E+ E ++GF G+P+TLA+Y+VEGGSSK F+ IK++ ++ P+ LHALL K S+ Y+ Q GAQAV IFD+W L+ D+++FSL Y+ +IVD + + + + + L+ G G LE +A TG D + LDWT D+A+ RRR+G VA+QGN+DP L+ I + + G + H+ NLGHGI P E+ F E Sbjct: 94 GEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDGRRVPVTLFTKGGGQWLEAMAETGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLYAPPARIEEEVASILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVE 343
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_ECO45 (Uroporphyrinogen decarboxylase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=hemE PE=3 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 3.624e-49 Identity = 102/250 (40.80%), Postives = 152/250 (60.80%), Query Frame = 1 Query: 7 GKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPD--LSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWK-HILNLGHGIKVGTPEENVAHFFE 747 G+GP P+ A+VD++ DPE+ + YV A+ +R E+ E ++GF G+P+TLA+Y+VEGGSSK F+ IK++ ++ P+ LHALL K S+ Y+ Q GAQAV IFD+W L+ D+++FSL Y+ +IVD + + + + + L+ G G LE +A TG D + LDWT D+A+ RRR+G VA+QGN+DP L+ I + + G + H+ NLGHGI P E+ F E Sbjct: 94 GEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDGRRVPVTLFTKGGGQWLEAMAETGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLYAPPARIEEEVASILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVE 343 The following BLAST results are available for this feature:
BLAST of DC900215 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DC900215 ID=DC900215; Name=DC900215; organism=Citrus sinensis; type=EST; length=840bpback to top |