DC900215
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_ECO27 (Uroporphyrinogen decarboxylase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=hemE PE=3 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 3.624e-49 Identity = 102/250 (40.80%), Postives = 152/250 (60.80%), Query Frame = 1 Query: 7 GKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPD--LSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWK-HILNLGHGIKVGTPEENVAHFFE 747 G+GP P+ A+VD++ DPE+ + YV A+ +R E+ E ++GF G+P+TLA+Y+VEGGSSK F+ IK++ ++ P+ LHALL K S+ Y+ Q GAQAV IFD+W L+ D+++FSL Y+ +IVD + + + + + L+ G G LE +A TG D + LDWT D+A+ RRR+G VA+QGN+DP L+ I + + G + H+ NLGHGI P E+ F E Sbjct: 94 GEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDGRRVPVTLFTKGGGQWLEAMAETGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLYAPPARIEEEVASILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVE 343
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_VIBFM (Uroporphyrinogen decarboxylase OS=Vibrio fischeri (strain MJ11) GN=hemE PE=3 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 4.734e-49 Identity = 99/251 (39.44%), Postives = 153/251 (60.96%), Query Frame = 1 Query: 7 GKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPD--LSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAG--RWKHILNLGHGIKVGTPEENVAHFFE 747 G+GP PI A+VD++ DPE + YV A+ +R+++ E ++GF G+P+TLA+Y+VEGGSSK F+KIK++ +++P LH LL K S+ +Y+ Q GAQ+V +FD+W L+P D+ EFSL Y+ +IVD + + + + + L+ G LE +A TG D V LDWT+++A+ + R+G VA+QGN+DP L+ + I + + G H+ NLGHGI + P EN F + Sbjct: 94 GEGPKFERPITCKADVDKIGLPDPEGELQYVMNAVRQIRKDLKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPATLHLLLDKLADSVIEYLNAQIKAGAQSVMVFDTWGGVLTPRDYNEFSLRYMHKIVDGLIRENEGRRVPVTLFTKNGGMWLESIAATGCDAVGLDWTINIADAKARIGDKVALQGNMDPSILYAQPERIRQEVGTILEGFGDAGTGHVFNLGHGIHLDVPPENAGVFVD 344
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_VIBF1 (Uroporphyrinogen decarboxylase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=hemE PE=3 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 4.734e-49 Identity = 99/251 (39.44%), Postives = 153/251 (60.96%), Query Frame = 1 Query: 7 GKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPD--LSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAG--RWKHILNLGHGIKVGTPEENVAHFFE 747 G+GP PI A+VD++ DPE + YV A+ +R+++ E ++GF G+P+TLA+Y+VEGGSSK F+KIK++ +++P LH LL K S+ +Y+ Q GAQ+V +FD+W L+P D+ EFSL Y+ +IVD + + + + + L+ G LE +A TG D V LDWT+++A+ + R+G VA+QGN+DP L+ + I + + G H+ NLGHGI + P EN F + Sbjct: 94 GEGPKFERPITCKADVDKIGLPDPEGELQYVMNAVRQIRKDLKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPATLHLLLDKLADSVIEYLNAQIKAGAQSVMVFDTWGGVLTPRDYNEFSLRYMHKIVDGLIRENEGRRVPVTLFTKNGGMWLESIAATGCDAVGLDWTINIADAKARIGDKVALQGNMDPSILYAQPERIRQEVGTILEGFGDAGTGHVFNLGHGIHLDVPPENAGVFVD 344
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_SHISS (Uroporphyrinogen decarboxylase OS=Shigella sonnei (strain Ss046) GN=hemE PE=3 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 4.734e-49 Identity = 102/250 (40.80%), Postives = 152/250 (60.80%), Query Frame = 1 Query: 7 GKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPD--LSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWK-HILNLGHGIKVGTPEENVAHFFE 747 G+GP P+ A+VD++ DPE+ + YV A+ +R E+ E ++GF G+P+TLA+Y+VEGGSSK F+ IK++ ++ P+ LHALL K S+ Y+ Q GAQAV IFD+W L+ D+++FSL Y+ +IVD + + + + + L+ G G LE +A TG D + LDWT D+A+ RRR+G VA+QGN+DP L+ I + + G + H+ NLGHGI P E+ F E Sbjct: 94 GEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDGRRVPVTLFTKGGGQWLEAMAETGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLYAPPARIEEEVATILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVE 343
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_SHIFL (Uroporphyrinogen decarboxylase OS=Shigella flexneri GN=hemE PE=1 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 4.734e-49 Identity = 102/250 (40.80%), Postives = 152/250 (60.80%), Query Frame = 1 Query: 7 GKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPD--LSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWK-HILNLGHGIKVGTPEENVAHFFE 747 G+GP P+ A+VD++ DPE+ + YV A+ +R E+ E ++GF G+P+TLA+Y+VEGGSSK F+ IK++ ++ P+ LHALL K S+ Y+ Q GAQAV IFD+W L+ D+++FSL Y+ +IVD + + + + + L+ G G LE +A TG D + LDWT D+A+ RRR+G VA+QGN+DP L+ I + + G + H+ NLGHGI P E+ F E Sbjct: 94 GEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRHELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDGRRVPVTLFTKGGGQWLEAMAETGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLYAPPARIEEEVATILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVE 343
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_SHIF8 (Uroporphyrinogen decarboxylase OS=Shigella flexneri serotype 5b (strain 8401) GN=hemE PE=3 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 4.734e-49 Identity = 102/250 (40.80%), Postives = 152/250 (60.80%), Query Frame = 1 Query: 7 GKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPD--LSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWK-HILNLGHGIKVGTPEENVAHFFE 747 G+GP P+ A+VD++ DPE+ + YV A+ +R E+ E ++GF G+P+TLA+Y+VEGGSSK F+ IK++ ++ P+ LHALL K S+ Y+ Q GAQAV IFD+W L+ D+++FSL Y+ +IVD + + + + + L+ G G LE +A TG D + LDWT D+A+ RRR+G VA+QGN+DP L+ I + + G + H+ NLGHGI P E+ F E Sbjct: 94 GEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRHELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDGRRVPVTLFTKGGGQWLEAMAETGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLYAPPARIEEEVATILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVE 343
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_SHIBS (Uroporphyrinogen decarboxylase OS=Shigella boydii serotype 4 (strain Sb227) GN=hemE PE=3 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 4.734e-49 Identity = 102/250 (40.80%), Postives = 152/250 (60.80%), Query Frame = 1 Query: 7 GKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPD--LSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWK-HILNLGHGIKVGTPEENVAHFFE 747 G+GP P+ A+VD++ DPE+ + YV A+ +R E+ E ++GF G+P+TLA+Y+VEGGSSK F+ IK++ ++ P+ LHALL K S+ Y+ Q GAQAV IFD+W L+ D+++FSL Y+ +IVD + + + + + L+ G G LE +A TG D + LDWT D+A+ RRR+G VA+QGN+DP L+ I + + G + H+ NLGHGI P E+ F E Sbjct: 94 GEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDGRRVPVTLFTKGGGQWLEAMAETGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLYAPPARIEEEVATILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVE 343
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_SHIB3 (Uroporphyrinogen decarboxylase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=hemE PE=3 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 4.734e-49 Identity = 102/250 (40.80%), Postives = 152/250 (60.80%), Query Frame = 1 Query: 7 GKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPD--LSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWK-HILNLGHGIKVGTPEENVAHFFE 747 G+GP P+ A+VD++ DPE+ + YV A+ +R E+ E ++GF G+P+TLA+Y+VEGGSSK F+ IK++ ++ P+ LHALL K S+ Y+ Q GAQAV IFD+W L+ D+++FSL Y+ +IVD + + + + + L+ G G LE +A TG D + LDWT D+A+ RRR+G VA+QGN+DP L+ I + + G + H+ NLGHGI P E+ F E Sbjct: 94 GEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDGRRVPVTLFTKGGGQWLEAMAETGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLYAPPARIEEEVATILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVE 343
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_SHEPA (Uroporphyrinogen decarboxylase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=hemE PE=3 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 4.734e-49 Identity = 103/249 (41.37%), Postives = 152/249 (61.04%), Query Frame = 1 Query: 7 GKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPD---LSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWK-HILNLGHGIKVGTPEENVAHF 741 G+GP P +T + ++ DPE+ + YV +A++ +R E+ E ++GF G+P+TLA+Y+VEGGSSK F KIK++A+ +P LH LL K S+ Y+ Q NGAQ++ IFDSW LS + EFSL Y+++IVD + + H D + + L+ G G LE +A TG D + LDWTVD+ + RRR+G VA+QGN+DP L+G+ + I ++ + G H+ NLGHGI E F Sbjct: 94 GEGPRFERPTDTIDSIKKLCIPDPEDELGYVMRAVSTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFEKIKKMAYEEPATLHMLLDKLADSVTLYLNAQVANGAQSLMIFDSWGGALSHHAYREFSLRYMQKIVDGLTR-HADGRQVPVTLFTKGGGLWLESMAETGCDALGLDWTVDIGDARRRVGHKVALQGNMDPSVLYGTPERIHQEVDQILASYGEGTGHVFNLGHGIHQHVDPERAGSF 341
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_SHEHH (Uroporphyrinogen decarboxylase OS=Shewanella halifaxensis (strain HAW-EB4) GN=hemE PE=3 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 4.734e-49 Identity = 103/249 (41.37%), Postives = 152/249 (61.04%), Query Frame = 1 Query: 7 GKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPD---LSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWK-HILNLGHGIKVGTPEENVAHF 741 G+GP P +T + ++ DPE+ + YV +A++ +R E+ E ++GF G+P+TLA+Y+VEGGSSK F KIK++A+ +P LH LL K S+ Y+ Q NGAQ++ IFDSW LS + EFSL Y+++IVD + + H D + + L+ G G LE +A TG D + LDWTVD+ + RRR+G VA+QGN+DP L+G+ + I ++ + G H+ NLGHGI E F Sbjct: 94 GEGPRFERPTDTIDSIKKLCIPDPEDELGYVMRAVSTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFEKIKKMAYEEPATLHMLLDKLADSVTLYLNAQVANGAQSLMIFDSWGGALSHHAYREFSLRYMQKIVDGLTR-HADGRQVPVTLFTKGGGLWLESMAETGCDALGLDWTVDIGDARRRVGHKVALQGNMDPSVLYGTPERIHQEVDQILSSYGEGTGHVFNLGHGIHQHVDPERAGSF 341 The following BLAST results are available for this feature:
BLAST of DC900215 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DC900215 ID=DC900215; Name=DC900215; organism=Citrus sinensis; type=EST; length=840bpback to top |