DC900211
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900211 vs. ExPASy Swiss-Prot
Match: RL221_DICDI (60S ribosomal protein L22 1 OS=Dictyostelium discoideum GN=rpl22 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.979e-16 Identity = 44/105 (41.90%), Postives = 65/105 (61.90%), Query Frame = 2 Query: 116 FVIDCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTREKTKITVTSDSNFSXXXXXXXXXXXXXXHNVRDWLRVIASNKDRSVYELRYFNIAENEGEE 430 FVIDC P KI+D+A+ EK+L +RIKV K G LG +V ++++K+KI + + FS +RD+LRV+A+ K + YELRYFNI ++E +E Sbjct: 15 FVIDCTAPA-GKIVDVAAFEKYLHDRIKVDNKVGNLGSTVVISKDKSKIIINTTIPFSKRYLKYLTKKFLKFKQIRDFLRVVATTK--NTYELRYFNIGDSESQE 116
BLAST of DC900211 vs. ExPASy Swiss-Prot
Match: RL222_DICDI (60S ribosomal protein L22 2 OS=Dictyostelium discoideum GN=rpl22a PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.975e-15 Identity = 43/105 (40.95%), Postives = 64/105 (60.95%), Query Frame = 2 Query: 116 FVIDCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTREKTKITVTSDSNFSXXXXXXXXXXXXXXHNVRDWLRVIASNKDRSVYELRYFNIAENEGEE 430 FVIDC P KI+D+A+ EK+L +RIKV K LG +V ++++K+KI + + FS +RD+LRV+A+ K + YELRYFNI ++E +E Sbjct: 15 FVIDCTAPA-GKIVDVAAFEKYLHDRIKVDNKVSNLGSNVVISKDKSKIIINTTIPFSKRYLKYLTKKFLKFKQIRDFLRVVATTK--NTYELRYFNIGDSESQE 116
BLAST of DC900211 vs. ExPASy Swiss-Prot
Match: RL22_CAEEL (60S ribosomal protein L22 OS=Caenorhabditis elegans GN=rpl-22 PE=1 SV=3) HSP 1 Score: 79.337 bits (194), Expect = 1.672e-14 Identity = 46/106 (43.40%), Postives = 65/106 (61.32%), Query Frame = 2 Query: 116 FVIDCGKPVEDKIMDIASLEKFLQERIKVGGKAGAL-GDSVTVTREKTKITVTSDSNFSXXXXXXXXXXXXXXHNVRDWLRVIASNKDRSVYELRYFNIAENEGEE 430 F ++C PVED I+ I LE FL E+IKV GK G L ++V V K+K++V S+ FS +++RDWLRV+A NK + YE+RYF+I N+GE+ Sbjct: 23 FNVECKNPVEDGILRIEDLEAFLNEKIKVNGKTGHLAANNVKVEVAKSKVSVVSEVPFSKRYLKYLTKKYLKRNSLRDWLRVVAVNK--NTYEVRYFHI--NDGED 124
BLAST of DC900211 vs. ExPASy Swiss-Prot
Match: RL22A_YEAST (60S ribosomal protein L22-A OS=Saccharomyces cerevisiae GN=RPL22A PE=1 SV=3) HSP 1 Score: 75.0998 bits (183), Expect = 3.152e-13 Identity = 38/108 (35.19%), Postives = 58/108 (53.70%), Query Frame = 2 Query: 113 TFVIDCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTREKTKITVTSDSNFSXXXXXXXXXXXXXXHNVRDWLRVIASNKDRSVYELRYFNIAENEGEEED 436 TF +D P E+ + D AS K+L + IKV G G LG++VTVT + T +TV S + FS + +RDW+R +++ + Y L ++ + E EEED Sbjct: 14 TFTVDVSSPTENGVFDPASYAKYLIDHIKVEGAVGNLGNAVTVTEDGTVVTVVSTAKFSGKYLKYLTKKYLKKNQLRDWIRFVSTKTNE--YRLAFYQVTPEEDEEED 119 The following BLAST results are available for this feature:
BLAST of DC900211 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DC900211 ID=DC900211; Name=DC900211; organism=Citrus sinensis; type=EST; length=616bpback to top |