DC900207
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900207 vs. ExPASy Swiss-Prot
Match: AGL8_SINAL (Agamous-like MADS-box protein AGL8 homolog OS=Sinapis alba GN=AGL8 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.447e-22 Identity = 55/130 (42.31%), Postives = 86/130 (66.15%), Query Frame = 3 Query: 180 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS-VRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSR 566 N NRQVTF KRR+GLLKKA+E+SVLCDAEVAL++FSS+G+L+EY+ +S + ++RY + + ++ + E KL+ ++ ++ R+ +GE L +L+ KEL++LE +L I +RSR Sbjct: 13 NKINRQVTFSKRRSGLLKKAHEISVLCDAEVALVIFSSKGKLFEYSTDSCMEKILERYDRYLYSDKQLVGRDISQSENWVLEHAKLKARVEVLEKNKRNFMGEDLDSLSLKELQSLEHQLHAAIKSIRSR 142
BLAST of DC900207 vs. ExPASy Swiss-Prot
Match: AGL15_BRANA (Agamous-like MADS-box protein AGL15 OS=Brassica napus GN=AGL15 PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.223e-22 Identity = 58/129 (44.96%), Postives = 82/129 (63.57%), Query Frame = 3 Query: 180 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSR 566 N +RQVTF KRR GLLKKA+ELSVLCDAEVA+IVFS G+L+E+++ S++ T+ RY S PG + Q E L+ +I +Q + H+ G+ L+ L+ KEL++LE +L + VR R Sbjct: 13 NANSRQVTFSKRRAGLLKKAHELSVLCDAEVAVIVFSKSGKLFEFSSTSMKKTLLRYGNYQISSDVPGINCKTENQEECTEVDLLKDEISMLQEKHLHMQGKPLNLLSLKELQHLEKQLNFSLISVRER 141
BLAST of DC900207 vs. ExPASy Swiss-Prot
Match: AGL15_ARATH (Agamous-like MADS-box protein AGL15 OS=Arabidopsis thaliana GN=AGL15 PE=1 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.037e-20 Identity = 56/129 (43.41%), Postives = 81/129 (62.79%), Query Frame = 3 Query: 180 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSR 566 N +RQVTF KRR+GLLKKA ELSVLCDAEVA+IVFS G+L+EY++ ++ T+ RY N S + + + E L+ Q+ ++Q + + G+ L+ L FKEL++LE +L + VR R Sbjct: 13 NANSRQVTFSKRRSGLLKKARELSVLCDAEVAVIVFSKSGKLFEYSSTGMKQTLSRY-------GNHQSSSASKAEEDCAEVDILKDQLSKLQEKHLQLQGKGLNPLTFKELQSLEQQLYHALITVRER 134
BLAST of DC900207 vs. ExPASy Swiss-Prot
Match: DEF21_ANTMA (MADS-box protein defh21 OS=Antirrhinum majus GN=DEFH21 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.309e-20 Identity = 60/135 (44.44%), Postives = 87/135 (64.44%), Query Frame = 3 Query: 180 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN--SVRATIDRYKKA---CADSSNPGSITEANTQFYQQEATKLRRQIREIQ-NLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSR 566 N T+RQVTF KRR+GL+KK +ELSVLCDA++ LIVFS++G+L EY S++ IDRY KA + N N Q +E T+++ + +Q NL R+ G+ LST+ F+EL LE L++ + +VR+R Sbjct: 13 NNTSRQVTFSKRRSGLMKKTHELSVLCDAQIGLIVFSTKGKLTEYCTPPFSMKQIIDRYVKAKGILPEMENRAGPHADNDQVI-KELTRMKEETLNLQLNLQRY-KGDDLSTVRFEELTELEKLLDQSLNKVRAR 145
BLAST of DC900207 vs. ExPASy Swiss-Prot
Match: FBP1_PETHY (Floral homeotic protein FBP1 OS=Petunia hybrida GN=FBP1 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.016e-20 Identity = 50/129 (38.76%), Postives = 84/129 (65.12%), Query Frame = 3 Query: 180 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSR 566 N++NRQVT+ KRRNG+LKKA E+SVLCDA V++I+F+S G+++E+++ S+ +D+Y K + +A + E K+++ +Q RH+ GE +++LN +EL LE LE G+ +R++ Sbjct: 13 NSSNRQVTYSKRRNGILKKAKEISVLCDARVSVIIFASSGKMHEFSSTSLVDILDQYHKLTG-----RRLLDAKHENLDNEINKVKKDNDNMQIELRHLKGEDITSLNHRELMILEDALENGLTSIRNK 136
BLAST of DC900207 vs. ExPASy Swiss-Prot
Match: JOIN_SOLLC (MADS-box protein JOINTLESS OS=Solanum lycopersicum GN=J PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 3.939e-20 Identity = 57/132 (43.18%), Postives = 83/132 (62.88%), Query Frame = 3 Query: 180 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKACADSSNPGSITEANTQFYQQE---ATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSR 566 N+T RQVTF KRR GL KKA ELSVLCDA+VALI+FSS G+L++Y+++S++ ++R S N + + + + E ++L ++I E + R + GE L LN +EL+ LE LE G+ RV R Sbjct: 13 NSTARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFDYSSSSMKQILERRD---LHSKNLEKLDQPSLELQLVENSNYSRLSKEISEKSHRLRQMRGEELQGLNIEELQQLERSLETGLSRVIER 141
BLAST of DC900207 vs. ExPASy Swiss-Prot
Match: FBP24_PETHY (MADS-box protein FBP24 OS=Petunia hybrida GN=FBP24 PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 5.145e-20 Identity = 55/131 (41.98%), Postives = 80/131 (61.07%), Query Frame = 3 Query: 180 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYAN--NSVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSR 566 N T+RQVTF KRR GLLKK +ELSVLCDA++ LI+FSS+G+L+EY + +S+ I RY + S + + Q Y E K+RR +Q + G+ LS ++EL LE +LE + ++R+R Sbjct: 16 NKTSRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSKGKLFEYCSQPHSMSQIISRYLQTTGASL---PVEDNRVQLY-DEVAKMRRDTLNLQLSLQRYKGDDLSLAQYEELNELEKQLEHALNKIRAR 142
BLAST of DC900207 vs. ExPASy Swiss-Prot
Match: GLOB_TOBAC (Floral homeotic protein GLOBOSA OS=Nicotiana tabacum GN=GLO PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 6.720e-20 Identity = 49/129 (37.98%), Postives = 84/129 (65.12%), Query Frame = 3 Query: 180 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSR 566 N++NRQVT+ KRRNG+LKKA E+SVLCDA V++I+F+S G+++E+++ S+ +D+Y K + +A + E K+++ +Q RH+ GE +++LN +EL LE L+ G+ +R++ Sbjct: 13 NSSNRQVTYSKRRNGILKKAKEISVLCDARVSVIIFASSGKMHEFSSTSLVDILDQYHKLTG-----RRLWDAKHENLDNEINKVKKDNDNMQIELRHLKGEDITSLNHRELMMLEDALDNGLTSIRNK 136
BLAST of DC900207 vs. ExPASy Swiss-Prot
Match: SVP_ARATH (MADS-box protein SVP OS=Arabidopsis thaliana GN=SVP PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.553e-19 Identity = 55/129 (42.64%), Postives = 80/129 (62.02%), Query Frame = 3 Query: 180 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLN---RHILGEALSTLNFKELKNLEARLEKGIGRV 557 N T RQVTF KRR GL KKA ELSVLCDA+VALI+FSS G+L+E+ ++S++ ++R+ S N + + + + E + R +EI + + R + GE L L+ +EL+ LE LE G+ RV Sbjct: 13 NATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEFCSSSMKEVLERHN---LQSKNLEKLDQPSLELQLVENSDHARMSKEIADKSHRLRQMRGEELQGLDIEELQQLEKALETGLTRV 138
BLAST of DC900207 vs. ExPASy Swiss-Prot
Match: M17_MAIZE (MADS-box protein ZMM17 OS=Zea mays GN=M17 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 4.355e-19 Identity = 52/131 (39.69%), Postives = 84/131 (64.12%), Query Frame = 3 Query: 180 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN--SVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSR 566 N+TNRQVTF KRR GLLKKA EL+VLCDA V +++FSS G+++EY + S+R I++Y+ A +N + Q E T+++ ++ +++ R G+ LS+L ++ +LE +LE + +VR+R Sbjct: 13 NSTNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSPACSLRELIEQYQHA----TNSHFEEINHDQQILLEMTRMKNEMEKLETGIRRYTGDDLSSLTLDDVSDLEQQLEYSVSKVRAR 139 The following BLAST results are available for this feature:
BLAST of DC900207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 115
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900207 ID=DC900207; Name=DC900207; organism=Citrus sinensis; type=EST; length=572bpback to top |