DC900207
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900207 vs. ExPASy Swiss-Prot
Match: AP3_ARATH (Floral homeotic protein APETALA 3 OS=Arabidopsis thaliana GN=AP3 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.401e-17 Identity = 55/134 (41.04%), Postives = 78/134 (58.21%), Query Frame = 3 Query: 180 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY--ANNSVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHI---LGEALSTLNFKELKNLEARLEKGIGRVRSR 566 N TNRQVT+ KRRNGL KKA+EL+VLCDA V++I+FSS +L+EY N + + +D Y+ + TQ+ + + TK R+ + +NL I LGE L L+ +EL+ LE +E VR R Sbjct: 13 NQTNRQVTYSKRRNGLFKKAHELTVLCDARVSIIMFSSSNKLHEYISPNTTTKEIVDLYQTI-------SDVDVWATQYERMQETK-RKLLETNRNLRTQIKQRLGECLDELDIQELRRLEDEMENTFKLVRER 138
BLAST of DC900207 vs. ExPASy Swiss-Prot
Match: MADS1_PETHY (Floral homeotic protein PMADS 1 OS=Petunia hybrida GN=PMADS1 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.830e-17 Identity = 48/138 (34.78%), Postives = 82/138 (59.42%), Query Frame = 3 Query: 180 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSV--RATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHI-------LGEALSTLNFKELKNLEARLEKGIGRVRSR 566 N TNRQVT+ KRRNGL KKA EL+VLCDA+V++I+ SS G+L+E+ + S+ + D Y+K + K++ Q+R+++ +NR++ +GE+L+ LN+++L+ L ++ + +R R Sbjct: 13 NQTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMISSTGKLHEFISPSITTKQLFDLYQKT------------VGVDLWNSHYEKMQEQLRKLKEVNRNLRKEIRQRMGESLNDLNYEQLEELMENVDNSLKLIRER 138
BLAST of DC900207 vs. ExPASy Swiss-Prot
Match: MAD26_ORYSJ (MADS-box transcription factor 26 OS=Oryza sativa subsp. japonica GN=MADS26 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.121e-17 Identity = 53/130 (40.77%), Postives = 79/130 (60.77%), Query Frame = 3 Query: 180 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYA-NNSVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILG-EALSTLNFKELKNLEARLEKGIGRVRS 563 N +RQVTFCKRR GLLKKA ELS+LC+A++ +I+FS+ G+LY+ A ++ I+RYK A + +N + +QEA L+++I +Q R+I G A + +EL LE LE + +RS Sbjct: 13 NPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATTGTMEELIERYKSASGEQANACGDQRMDP---KQEAMVLKQEINLLQKGLRYIYGNRANEHMTVEELNALERYLEIWMYNIRS 139
BLAST of DC900207 vs. ExPASy Swiss-Prot
Match: MAD26_ORYSI (MADS-box transcription factor 26 OS=Oryza sativa subsp. indica GN=MADS26 PE=2 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 3.121e-17 Identity = 53/130 (40.77%), Postives = 79/130 (60.77%), Query Frame = 3 Query: 180 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYA-NNSVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILG-EALSTLNFKELKNLEARLEKGIGRVRS 563 N +RQVTFCKRR GLLKKA ELS+LC+A++ +I+FS+ G+LY+ A ++ I+RYK A + +N + +QEA L+++I +Q R+I G A + +EL LE LE + +RS Sbjct: 13 NPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATTGTMEELIERYKSASGEQANACGDQRMDP---KQEAMVLKQEINLLQKGLRYIYGNRANEHMTVEELNALERYLEIWMYNIRS 139
BLAST of DC900207 vs. ExPASy Swiss-Prot
Match: MAD20_ORYSJ (MADS-box transcription factor 20 OS=Oryza sativa subsp. japonica GN=MADS20 PE=2 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 6.954e-17 Identity = 49/137 (35.77%), Postives = 84/137 (61.31%), Query Frame = 3 Query: 180 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN--SVRATIDRYKKACADSSNPGSITEANTQFYQQEAT------KLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSR 566 N +RQVTF KRR GLLKKA+E++VLCD +VA IVFS++G L+ YA++ ++ +++Y + S I E F + E + KLR +I ++ R+++G+ L +L ++++ LE +++ + +RSR Sbjct: 13 NEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASSHTTMERILEKYDRHELLSEGNNVIEE----FPELEGSMSYDHIKLRGRIEALKKSQRNLMGQELDSLTLQDIQQLENQIDTSLNNIRSR 145
BLAST of DC900207 vs. ExPASy Swiss-Prot
Match: MAD33_ORYSJ (MADS-box transcription factor 33 OS=Oryza sativa subsp. japonica GN=MADS33 PE=2 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 9.082e-17 Identity = 54/130 (41.54%), Postives = 76/130 (58.46%), Query Frame = 3 Query: 180 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYA-NNSVRATIDRYKKACADSS-NPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRS 563 N +RQVTFCKRR GLLKKA ELSVLCDA+V +I+FSS+G+L+E A N ++ ++RY+ A PG++ Q +Q LR +I +Q R G + +L LE LE I ++R+ Sbjct: 13 NPVHRQVTFCKRRGGLLKKARELSVLCDADVGVIIFSSQGKLHELATNGNMHNLVERYQSNVAGGQMEPGAL--QRQQVAEQGIFLLREEIDLLQRGLRSTYGGGAGEMTLDKLHALEKGLELWIYQIRT 140
BLAST of DC900207 vs. ExPASy Swiss-Prot
Match: DEFA_ANTMA (Floral homeotic protein DEFICIENS OS=Antirrhinum majus GN=DEFA PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.186e-16 Identity = 48/131 (36.64%), Postives = 79/131 (60.31%), Query Frame = 3 Query: 180 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYAN--NSVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSR 566 N TNRQVT+ KRRNGL KKA+ELSVLCDA+V++I+ SS +L+EY + + + D+Y+KA + ++ + Q+ KL R ++ R +GE+L+ L ++++ NL ++ + +R R Sbjct: 13 NQTNRQVTYSKRRNGLFKKAHELSVLCDAKVSIIMISSTQKLHEYISPTTATKQLFDQYQKAVG-----VDLWSSHYEKMQEHLKKLNEVNRNLRREIRQRMGESLNDLGYEQIVNLIEDMDNSLKLIRER 138
BLAST of DC900207 vs. ExPASy Swiss-Prot
Match: AP32_ASAEU (MADS-box protein AeAP3-2 (Fragment) OS=Asarum europaeum GN=AP3-2 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 2.642e-16 Identity = 49/117 (41.88%), Postives = 77/117 (65.81%), Query Frame = 3 Query: 222 GLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN--SVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSR 566 GLLKKA EL++LCDA++ +I+FSS G+++E+++ S+R IDRY+K S N + + N Q Y E T+++ +I ++Q RH GE L++L E+ LE +LE + +VRSR Sbjct: 2 GLLKKARELAILCDAQLGVIIFSSSGKMFEFSSPPISMREIIDRYQKL---SGNCAPVYD-NQQVY-CEITRMKNEIDKLQATMRHFAGEDLTSLTMNEMLQLEQQLEISVNKVRSR 113
BLAST of DC900207 vs. ExPASy Swiss-Prot
Match: MAD55_ORYSJ (MADS-box transcription factor 55 OS=Oryza sativa subsp. japonica GN=MADS55 PE=2 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 5.887e-16 Identity = 55/144 (38.19%), Postives = 77/144 (53.47%), Query Frame = 3 Query: 192 RQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRY---KKACADSSNPGSI-----------TEANTQFY--------QQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRV 557 RQVTF KRR GL KKA EL+VLCDA+VAL+VFSS G+L ++A++++ ID+Y K + SI T N+ Y + + L Q+ E R + GE L L+ +EL+ +E LE G+ RV Sbjct: 17 RQVTFSKRRRGLFKKAEELAVLCDADVALVVFSSTGKLSQFASSNMNEIIDKYTTHSKNLGKTDKQPSIDLNFFLIILLRTYTNSYAYIHLLLQLEHSKCSSLNEQLAEASLQLRQMRGEELEGLSVEELQQMEKNLEAGLQRV 160
BLAST of DC900207 vs. ExPASy Swiss-Prot
Match: MADS4_ORYSJ (MADS-box transcription factor 4 OS=Oryza sativa subsp. japonica GN=MADS4 PE=1 SV=3) HSP 1 Score: 81.6481 bits (200), Expect = 2.921e-15 Identity = 48/131 (36.64%), Postives = 73/131 (55.73%), Query Frame = 3 Query: 180 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKACAD-SSNPGSIT-EANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSR 566 N+TNRQVTF KRR G+LKKA E+ VLCDAEV +++FSS G+L +Y + + +N G I + + E +++++ +Q RH+ GE L++L KEL +E L G +R + Sbjct: 13 NSTNRQVTFSKRRAGILKKAREIGVLCDAEVGVVIFSSAGKLSDYCTPKTTSVFPPLSRILEKYQTNSGKILWDEKHKSLSAEIDRVKKENDNMQIELRHMKGEDLNSLQPKELIAIEEALNNGQANLRDK 143 The following BLAST results are available for this feature:
BLAST of DC900207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 115
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900207 ID=DC900207; Name=DC900207; organism=Citrus sinensis; type=EST; length=572bpback to top |