DC900205

Overview
NameDC900205
Unique NameDC900205
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length760
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13796 contig Csv1_Contig13796:503..1262. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC900205 vs. ExPASy Swiss-Prot
Match: PER71_ARATH (Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.077e-21
Identity = 60/182 (32.97%), Postives = 95/182 (52.20%), Query Frame = 3
Query:    3 GRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 536
            GRRDGR S A      LP   DS++V  ++F+A+G++   LV L+G H++G   C    +RL+       DP ++P  +  +  +CP        V     D G+    D +YY N+   +G++  D  L TD  TRP V+++   +  F  EF+R++  +S    +TG  GEIR+VC+  N
Sbjct:  151 GRRDGRVSLASNANN-LPGPRDSVAVQQQKFSALGLNTRDLVVLVGGHTIGTAGCGVFRNRLFNTTGQTADPTIDPTFLAQLQTQCPQNGDGSVRVDL---DTGSGSTWDTSYYNNLSRGRGVLQSDQVLWTDPATRPIVQQLMAPRSTFNVEFARSMVRMSNIGVVTGANGEIRRVCSAVN 328          
BLAST of DC900205 vs. ExPASy Swiss-Prot
Match: PER72_ARATH (Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.713e-21
Identity = 58/184 (31.52%), Postives = 99/184 (53.80%), Query Frame = 3
Query:    3 GRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEV-----DPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLAT-DKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 536
            GRRD R +        +P  N++   +L +F   G+D   LV+L GSH++G + C     RLY +      D  L+  +   +  +CP +  D         D  TP   DN+Y++N++  KGL+  D  L T +K+++  V+  A++Q+ FF++F++++  +   +PLTG KGEIR++C   N
Sbjct:  153 GRRDARGASLSGSNNDIPAPNNTFQTILTKFKRQGLDLVDLVSLSGSHTIGNSRCTSFRQRLYNQSGNGKPDMTLSQYYATLLRQRCPRSGGDQTLFFL---DFATPFKFDNHYFKNLIMYKGLLSSDEILFTKNKQSKELVELYAENQEAFFEQFAKSMVKMGNISPLTGAKGEIRRICRRVN 333          
BLAST of DC900205 vs. ExPASy Swiss-Prot
Match: PER15_ARATH (Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.713e-21
Identity = 57/184 (30.98%), Postives = 99/184 (53.80%), Query Frame = 3
Query:    3 GRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEV-----DPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL-ATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 536
            GRRD   +        +P  N++ + ++ RF   G+D   +VAL GSH++G + C     RLY +      D  L   +  ++  +CP +  D    +   N  G     DN+Y++N+++N GL+  D  L ++++++R  VKK A+ Q+ FF++F+ ++  +   +PLTG+ GEIRK C   N
Sbjct:  156 GRRDSTSASLSGSNNNIPAPNNTFNTIVTRFNNQGLDLTDVVALSGSHTIGFSRCTSFRQRLYNQSGNGSPDRTLEQSYAANLRQRCPRSGGDQNLSELDINSAGR---FDNSYFKNLIENMGLLNSDEVLFSSNEQSRELVKKYAEDQEEFFEQFAESMIKMGNISPLTGSSGEIRKNCRKIN 336          
BLAST of DC900205 vs. ExPASy Swiss-Prot
Match: PER49_ARATH (Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=2 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 4.628e-21
Identity = 59/184 (32.07%), Postives = 97/184 (52.72%), Query Frame = 3
Query:    3 GRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPE-----VDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL-ATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 536
            GRRD R +        +P  N++   +L +F   G+D   LVAL GSH++G + C     RLY +      D  L      ++  +CP +  D         D  +    DN+Y++N+++NKGL+  D  L ++++++R  VKK A+ Q  FF++F+ ++  +   +PLTG+ GEIRK C   N
Sbjct:  150 GRRDSRSASLSQSNNNIPAPNNTFQTILSKFNRQGLDITDLVALSGSHTIGFSRCTSFRQRLYNQSGNGSPDMTLEQSFAANLRQRCPKSGGDQILSVL---DIISAASFDNSYFKNLIENKGLLNSDQVLFSSNEKSRELVKKYAEDQGEFFEQFAESMIKMGNISPLTGSSGEIRKNCRKIN 330          
BLAST of DC900205 vs. ExPASy Swiss-Prot
Match: PER6_ARATH (Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.894e-21
Identity = 58/182 (31.87%), Postives = 94/182 (51.65%), Query Frame = 3
Query:    3 GRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDP----ALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 536
            GR+D   S    +E  L   N +M  ++  F + G+    +VAL+G+H++G +HC +   R++ + D      +NP +   +   C +   D +   +  ND  TP   DN YY+N+    GL+  DH +A D RTR  V   A+ +  FF  F++A+  +SE N  TG  GE+R+ C+  N
Sbjct:  143 GRKDSLVSDMNRVEGKLARPNMTMDHIISIFESSGLTVQEMVALVGAHTIGFSHCKEFASRIFNKSDQNGPVEMNPKYAAELRKLCANYTNDEQMSAF--NDVFTPGKFDNMYYKNLKHGYGLLQSDHAIAFDNRTRSLVDLYAEDETAFFDAFAKAMEKVSEKNVKTGKLGEVRRRCDQYN 322          
BLAST of DC900205 vs. ExPASy Swiss-Prot
Match: PER46_ARATH (Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.894e-21
Identity = 57/185 (30.81%), Postives = 95/185 (51.35%), Query Frame = 3
Query:    3 GRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRL-------YPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 536
            GRRDG++S A  +   + D + ++  +++ F++ G+    LV L G+H++G +HC     R        +  +D +L+  +   +++KC  +      V    ND  T  V DN YYRN+  +KGL   D  L  D RTR  V+++A  ++ FF+ +S +   LS      G  GEIR+ C+  N
Sbjct:  145 GRRDGKESMAANVRPNIIDTDFTLDQMIDAFSSKGLSIQDLVVLSGAHTIGASHCNAFNGRFQRDSKGNFEVIDASLDNSYAETLMNKCSSSESSSLTVS---NDPETSAVFDNQYYRNLETHKGLFQTDSALMEDNRTRTMVEELASDEESFFQRWSESFVKLSMVGVRVGEDGEIRRSCSSVN 326          
BLAST of DC900205 vs. ExPASy Swiss-Prot
Match: PER2_ARAHY (Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.759e-20
Identity = 60/187 (32.09%), Postives = 99/187 (52.94%), Query Frame = 3
Query:    3 GRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDY----FFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 536
            GRRDGR S+A  +   LP  +DS+ V  ++FAA G++   LV L+G H++G + C    +RL+        DPA++P  V ++   CP    +  A   V  D G+    D +Y+ N+ + +G++  D  L  D  T+ +V++    + +    F  EF +++  +S     TGT GEIRK+C+  N
Sbjct:  148 GRRDGRVSQASDVSN-LPAPSDSVDVQKQKFAAKGLNTQDLVTLVGGHTIGTSECQFFSNRLFNFNGTAAADPAIDPSFVSNLQALCPQ---NTGAANRVALDTGSQFKFDTSYFSNLRNRRGVLQSDQALWNDPSTKSFVQRYLGLRGFLGLTFNVEFGKSMVKMSNIGVKTGTDGEIRKICSAFN 330          
BLAST of DC900205 vs. ExPASy Swiss-Prot
Match: PER14_ARATH (Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.297e-20
Identity = 57/184 (30.98%), Postives = 99/184 (53.80%), Query Frame = 3
Query:    3 GRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEV-----DPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL-ATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 536
            GRRD   +      + LP+ ++    +  RF+  G++   LVAL GSH++G + C     RLY +      D  L   +   +  +CP +  D    +   N  G     DN+Y++N+++N GL+  D  L ++++++R  VKK A+ Q+ FF++F+ ++  + + +PLTG+ GEIRK C   N
Sbjct:  155 GRRDSATASRAKPNKDLPEPDNLFDTIFLRFSNEGLNLTDLVALSGSHTIGFSRCTSFRQRLYNQSGSGSPDTTLEKSYAAILRQRCPRSGGDQNLSELDINSAGR---FDNSYFKNLIENMGLLNSDQVLFSSNEQSRELVKKYAEDQEEFFEQFAESMIKMGKISPLTGSSGEIRKKCRKIN 335          
BLAST of DC900205 vs. ExPASy Swiss-Prot
Match: PER54_ARATH (Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.000e-20
Identity = 58/185 (31.35%), Postives = 89/185 (48.11%), Query Frame = 3
Query:    3 GRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL--ATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 536
            GRRDG  +        LP   + ++ +  +F A+G+    +V+L G+H+ GR  CV   +RL+        DP LN   +  +   CP    +         D  TP   DNNY+ N+  N GL+  D +L   T   T P V   A +Q  FF+ F +++  +   +PLTG+ GEIR+ C + N
Sbjct:  153 GRRDGLTANLSGANSSLPSPFEGLNNITSKFVAVGLKTTDVVSLSGAHTFGRGQCVTFNNRLFNFNGTGNPDPTLNSTLLSSLQQLCPQ---NGSNTGITNLDLSTPDAFDNNYFTNLQSNNGLLQSDQELFSNTGSATVPIVNSFASNQTLFFEAFVQSMIKMGNISPLTGSSGEIRQDCKVVN 334          
BLAST of DC900205 vs. ExPASy Swiss-Prot
Match: PER38_ARATH (Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.000e-20
Identity = 62/187 (33.16%), Postives = 96/187 (51.34%), Query Frame = 3
Query:    3 GRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGID-APGLVALLGSHSVGRTHCVKLVHRLYPE-----VDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKR---TRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 536
            GRRD  +   ++    LP  + ++  + +RF  +G+D +  LVAL G H+ G++ C  ++ RLY        DP L+  ++  +  +CP        V +   D  TP + DN YY N+ +NKGL+  D +L +      T P V+  A  Q  FF  F +AI  +S  +PLTG +GEIR  C + N
Sbjct:  144 GRRDSLRGFMDLANDNLPGPSSTLKQLKDRFKNVGLDRSSDLVALSGGHTFGKSQCQFIMDRLYNFGETGLPDPTLDKSYLATLRKQCPRNGNQSVLVDF---DLRTPTLFDNKYYVNLKENKGLIQSDQELFSSPDAADTLPLVRAYADGQGTFFDAFVKAIIRMSSLSPLTGKQGEIRLNCRVVN 327          
The following BLAST results are available for this feature:
BLAST of DC900205 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 104
Match NameE-valueIdentityDescription
PER71_ARATH2.077e-2132.97Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=... [more]
PER72_ARATH2.713e-2131.52Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=... [more]
PER15_ARATH2.713e-2130.98Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=... [more]
PER49_ARATH4.628e-2132.07Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=... [more]
PER6_ARATH7.894e-2131.87Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 ... [more]
PER46_ARATH7.894e-2130.81Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=... [more]
PER2_ARAHY1.759e-2032.09Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 ... [more]
PER14_ARATH2.297e-2030.98Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=... [more]
PER54_ARATH3.000e-2031.35Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=... [more]
PER38_ARATH3.000e-2033.16Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=... [more]

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Properties
Property NameValue
Genbank descriptionDC900205 VSS Citrus sinensis cDNA clone VS28242 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900205 ID=DC900205; Name=DC900205; organism=Citrus sinensis; type=EST; length=760bp
CAGGAAGAAGAGATGGTAGAAAAAGCAGAGCAGAGATACTTGAGCAGTAT
CTCCCAGATCACAATGACAGCATGTCTGTTGTTCTTGAGAGGTTTGCAGC
CATTGGCATTGACGCCCCTGGACTTGTTGCTCTGCTAGGATCTCACAGTG
TTGGCAGAACTCATTGTGTGAAGCTGGTGCACCGTCTGTACCCAGAAGTT
GACCCTGCACTGAACCCTGACCATGTTCCGCATATGCTCCATAAGTGTCC
TGATGCAATCCCAGACCCCAAGGCTGTTCAGTATGTGAGGAATGACCGTG
GCACACCCATGGTGCTGGACAACAACTACTATAGGAACATATTGGACAAC
AAGGGCTTGATGATGGTTGATCATCAGCTAGCCACCGACAAGAGGACAAG
ACCTTATGTTAAGAAGATGGCCAAGAGTCAAGACTACTTCTTCAAGGAAT
TTTCAAGAGCCATTACTCTCCTTTCTGAGAACAACCCTCTCACAGGTACA
AAGGGTGAGATCCGAAAGGTTTGCAATCTTGCCAACAAGCTCCACGACAA
GTCCTAGCTAGCTAACAGCTGTATTAGCTACAACAAGTTAATAGCTCCAA
ATTTTTCTTCCTTGTTTCTTCTATGAGGAAGAAAAGAGTGTGAGATGAGC
TCCCAATAAGATGTTTTTTCTAGATCGGTTTGTTTCCTGTGAGATGTTCG
TATTACTGCTATTATGTTCCTTAGATGTACCGTCCAATGTTTAAGCCTAG
GCTTTCCTTT
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