DC900205

Overview
NameDC900205
Unique NameDC900205
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length760
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13796 contig Csv1_Contig13796:503..1262. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC900205 vs. ExPASy Swiss-Prot
Match: PER1C_ARMRU (Peroxidase C1C (Fragment) OS=Armoracia rusticana GN=PRXC1C PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.000e-20
Identity = 68/196 (34.69%), Postives = 97/196 (49.49%), Query Frame = 3
Query:    3 GRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPG-LVALLGSHSVGRTHCVKLVHRLYPEV-----DPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL-----ATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLANK---LHD 548
            GRRD R++  ++    LP  + ++  +   FA +G++ P  LVAL G H+ G+  C  ++ RLY        DP LN  ++  +  +CP        V +   D  TP V DN YY N+ + KGL+  D +L     ATD  T P V+  A     FF  F  A+  +    PLTGT+GEIR  C + N    LHD
Sbjct:  131 GRRDSRQAFLDLANANLPAPSFTLPELKAAFANVGLNRPSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRQQCPRNGNQSVLVDF---DLRTPTVFDNKYYVNLKEQKGLIQSDQELFSSPNATD--TIPLVRSYADGTQTFFNAFVEAMNRMGNITPLTGTQGEIRLNCRVVNSNSLLHD 321          
BLAST of DC900205 vs. ExPASy Swiss-Prot
Match: PER55_ARATH (Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.918e-20
Identity = 58/183 (31.69%), Postives = 97/183 (53.01%), Query Frame = 3
Query:    3 GRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRL-----YPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 536
            GRRDG  S+A  +   LP+    +  +++ FA+ G+    ++AL G+H++G +HC +  +RL     +  VDP ++P +   ++  C D  P+P AV  V  D  +    DN+YY+N++  KGL   D  L  D  ++  V + A + + F+  FS A+  L       G +GEIR+ C+  N
Sbjct:  152 GRRDGLVSKASRVTGKLPEPGLDVRGLVQIFASNGLSLTDMIALSGAHTIGSSHCNRFANRLHNFSTFMPVDPTMDPVYAQQLIQACSD--PNPDAV--VDIDLTSRDTFDNSYYQNLVARKGLFTSDQALFNDLSSQATVVRFANNAEEFYSAFSSAMRNLGRVGVKVGNQGEIRRDCSAFN 330          
BLAST of DC900205 vs. ExPASy Swiss-Prot
Match: PER37_ARATH (Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 5.117e-20
Identity = 62/187 (33.16%), Postives = 97/187 (51.87%), Query Frame = 3
Query:    3 GRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGID-APGLVALLGSHSVGRTHCVKLVHRLYPEV-----DPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATD---KRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 536
            GRRD  +   ++    LP    +++ + +RF  +G+D A  LVAL G H+ G+  C  ++ RLY        DP L+  ++  +  +CP        V +   D  TP + DN YY N+ +NKGL+  D +L +      T P V++ A  Q  FF  F++A+  +S  +PLTG +GEIR  C + N
Sbjct:  144 GRRDSLRGFMDLANDNLPAPFFTLNQLKDRFKNVGLDRASDLVALSGGHTFGKNQCQFIMDRLYNFSNTGLPDPTLDKSYLSTLRKQCPRNGNQSVLVDF---DLRTPTLFDNKYYVNLKENKGLIQSDQELFSSPDASDTLPLVREYADGQGKFFDAFAKAMIRMSSLSPLTGKQGEIRLNCRVVN 327          
BLAST of DC900205 vs. ExPASy Swiss-Prot
Match: PER2_ARMRU (Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.683e-20
Identity = 60/187 (32.09%), Postives = 94/187 (50.27%), Query Frame = 3
Query:    3 GRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPG-LVALLGSHSVGRTHCVKLVHRLYP-----EVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATD---KRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 536
            GRRD  +   ++    LP  + ++ V+ ++F  +G+D P  LVAL G H+ G+  C  ++ RLY      + DP L+  ++  +  +CP    +      V  D  TP + DN YY N+ +NKGL+  D +L +      T P V+  A  Q  FF  F  A+  +   +P TG +GEIR  C + N
Sbjct:  146 GRRDSLRGFMDLANDNLPGPSSTLQVLKDKFRNVGLDRPSDLVALSGGHTFGKNQCQFIMDRLYNFSNSGKPDPTLDKSYLSTLRKQCPR---NGNLSVLVDFDLRTPTIFDNKYYVNLKENKGLIQSDQELFSSPDASDTIPLVRAYADGQGKFFDAFVEAMIRMGNLSPSTGKQGEIRLNCRVVN 329          
BLAST of DC900205 vs. ExPASy Swiss-Prot
Match: PER1_ORYSJ (Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PRX74 PE=2 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 6.683e-20
Identity = 61/188 (32.45%), Postives = 95/188 (50.53%), Query Frame = 3
Query:    3 GRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY--------PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKS--QDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 536
            GRRDGR S A   +Q LP    + + + + FAA  +D   LV L   H++G +HC     RLY         ++DP L   ++  +  KC     +   V+    D G+    D  Y++N+   +GL   D +L T+  TR YV++ A    +D FF +F+ ++  +     LTG++GEIRK CN+ N
Sbjct:  143 GRRDGRVSIANETDQ-LPPPTANFTELTQMFAAKNLDLKDLVVLSAGHTIGTSHCFSFTDRLYNFTGLDNAHDIDPTLELQYMARLRSKCTSLQDNTTLVEM---DPGSFKTFDLGYFKNVAKRRGLFHSDGELLTNGFTRAYVQRHAGGGYKDEFFADFAASMVKMGGVEVLTGSQGEIRKKCNVVN 326          
BLAST of DC900205 vs. ExPASy Swiss-Prot
Match: PER1B_ARMRU (Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.683e-20
Identity = 68/196 (34.69%), Postives = 96/196 (48.98%), Query Frame = 3
Query:    3 GRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPG-LVALLGSHSVGRTHCVKLVHRLYPEV-----DPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL-----ATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLANK---LHD 548
            GRRD  ++  ++    LP    ++  + + FA +G+D P  LVAL G H+ G+  C  ++ RLY        DP LN  ++  +  +CP        V +   D  TP V DN YY N+ + KGL+  D +L     ATD  T P V+  A     FF  F  A+  +    PLTGT+GEIR  C + N    LHD
Sbjct:  150 GRRDSLQAFLDLANANLPAPFFTLPQLKDAFAKVGLDRPSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRQQCPLNGNQSVLVDF---DLRTPTVFDNKYYVNLKEQKGLIQSDQELFSSPNATD--TIPLVRSFADGTQKFFNAFVEAMNRMGNITPLTGTQGEIRLNCRVVNSNSLLHD 340          
BLAST of DC900205 vs. ExPASy Swiss-Prot
Match: PER18_ARATH (Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.683e-20
Identity = 59/185 (31.89%), Postives = 95/185 (51.35%), Query Frame = 3
Query:    3 GRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHR--LYPE-----VDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 536
            GRRDGR S A  +   + D + ++  ++  F++ G+    LV L G+H++G  HC     R  L P+     +D +L+  +   +++KC  ++     V  V ND  T    DN YY+N+L +KGL   D  L  D RTR  V+ +A  Q+ FF  ++ +   +S      G +GEIR+ C+  N
Sbjct:  147 GRRDGRVSMAANVRPNIIDTDFTVDKMINIFSSKGLSVHDLVVLSGAHTIGAAHCNTFNSRFKLDPKGNLELIDASLDNSYAQTLVNKCSSSLDPTTTV--VDNDPETSSTFDNQYYKNLLAHKGLFQTDSALMEDDRTRKIVEILANDQESFFDRWTESFLKMSLMGVRVGEEGEIRRSCSAVN 329          
BLAST of DC900205 vs. ExPASy Swiss-Prot
Match: PER61_ARATH (Probable peroxidase 61 OS=Arabidopsis thaliana GN=PER61 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.944e-19
Identity = 57/185 (30.81%), Postives = 96/185 (51.89%), Query Frame = 3
Query:    3 GRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYP-----EVDPALNPDHVPHMLHKCPDAIPDPKA--VQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 536
            GRRDG    A+ ++  LP  + S+   L  F + G+D   +  LLG+HS+G+THC  +V RLY      + DP +N   V  + + CP      +   + Y+  D G+     ++YY  +L +  ++ VD +L  +  ++   ++ A   + F K F+ A++ +   N LTGT GEIR+ C + N
Sbjct:  153 GRRDGGTLNADAVD--LPSPSISVDESLAYFKSKGLDVLDMTTLLGAHSMGKTHCSYVVDRLYNFKNTGKPDPTMNTTLVSQLRYLCPPRTQKGQTDPLVYLNPDSGSSNRFTSSYYSRVLSHNAVLRVDQELLNNDDSKEITQEFASGFEDFRKSFALAMSRMGSINVLTGTAGEIRRDCRVTN 335          
BLAST of DC900205 vs. ExPASy Swiss-Prot
Match: PER29_ARATH (Peroxidase 29 OS=Arabidopsis thaliana GN=PER29 PE=2 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 3.317e-19
Identity = 56/180 (31.11%), Postives = 92/180 (51.11%), Query Frame = 3
Query:    3 GRRDGRKSRAE-ILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRL--YPEVDPALNPDHVPHMLHKCPDAIPDPKAVQ--YVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCN 527
            GR+D   + ++ + +  LP     +   L  FA  G+     VA++G+H++G THC  ++ R          ++P     +   CP+  P  +A +  +V ND+ T ++ D  YY + +  +G + +D ++  D RTRP+V+  A  QD FF  FS A   LS    LTG +G IR VC+
Sbjct:  158 GRKDSLSTPSKHVADSELPPSTADVDTTLSLFANKGMTIEESVAIMGAHTIGVTHCNNVLSRFDNANATSENMDPRFQTFLRVACPEFSPTSQAAEATFVPNDQ-TSVIFDTAYYDDAIAGRGNLRIDSEIGADPRTRPFVEAFAADQDRFFNAFSSAFVKLSSYKVLTGNEGVIRSVCD 336          
BLAST of DC900205 vs. ExPASy Swiss-Prot
Match: PER16_ARATH (Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=1 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 3.317e-19
Identity = 59/183 (32.24%), Postives = 87/183 (47.54%), Query Frame = 3
Query:    3 GRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYP-----EVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 536
            GRRDGR S    ++  LP  +  +  +   FA  G+    ++AL G+H++G  HC K   R+Y       +DP LN  +   +   CP  +    A+     D  +P   DN Y++N+    GL   D  L +D+R+R  V   A S+  F + F  AIT L      TG  GEIR+ C+  N
Sbjct:  144 GRRDGRLSTVASVQHSLPQPSFKLDQLNTMFARHGLSQTDMIALSGAHTIGFAHCGKFSKRIYNFSPKRPIDPTLNIRYALQLRQMCPIRVDLRIAINM---DPTSPNTFDNAYFKNLQKGMGLFTSDQVLFSDERSRSTVNSFASSEATFRQAFISAITKLGRVGVKTGNAGEIRRDCSRVN 323          
The following BLAST results are available for this feature:
BLAST of DC900205 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 104
Match NameE-valueIdentityDescription
PER1C_ARMRU3.000e-2034.69Peroxidase C1C (Fragment) OS=Armoracia rusticana G... [more]
PER55_ARATH3.918e-2031.69Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=... [more]
PER37_ARATH5.117e-2033.16Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=... [more]
PER2_ARMRU6.683e-2032.09Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3... [more]
PER1_ORYSJ6.683e-2032.45Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PR... [more]
PER1B_ARMRU6.683e-2034.69Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE... [more]
PER18_ARATH6.683e-2031.89Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=... [more]
PER61_ARATH1.944e-1930.81Probable peroxidase 61 OS=Arabidopsis thaliana GN=... [more]
PER29_ARATH3.317e-1931.11Peroxidase 29 OS=Arabidopsis thaliana GN=PER29 PE=... [more]
PER16_ARATH3.317e-1932.24Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=... [more]

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Properties
Property NameValue
Genbank descriptionDC900205 VSS Citrus sinensis cDNA clone VS28242 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900205 ID=DC900205; Name=DC900205; organism=Citrus sinensis; type=EST; length=760bp
CAGGAAGAAGAGATGGTAGAAAAAGCAGAGCAGAGATACTTGAGCAGTAT
CTCCCAGATCACAATGACAGCATGTCTGTTGTTCTTGAGAGGTTTGCAGC
CATTGGCATTGACGCCCCTGGACTTGTTGCTCTGCTAGGATCTCACAGTG
TTGGCAGAACTCATTGTGTGAAGCTGGTGCACCGTCTGTACCCAGAAGTT
GACCCTGCACTGAACCCTGACCATGTTCCGCATATGCTCCATAAGTGTCC
TGATGCAATCCCAGACCCCAAGGCTGTTCAGTATGTGAGGAATGACCGTG
GCACACCCATGGTGCTGGACAACAACTACTATAGGAACATATTGGACAAC
AAGGGCTTGATGATGGTTGATCATCAGCTAGCCACCGACAAGAGGACAAG
ACCTTATGTTAAGAAGATGGCCAAGAGTCAAGACTACTTCTTCAAGGAAT
TTTCAAGAGCCATTACTCTCCTTTCTGAGAACAACCCTCTCACAGGTACA
AAGGGTGAGATCCGAAAGGTTTGCAATCTTGCCAACAAGCTCCACGACAA
GTCCTAGCTAGCTAACAGCTGTATTAGCTACAACAAGTTAATAGCTCCAA
ATTTTTCTTCCTTGTTTCTTCTATGAGGAAGAAAAGAGTGTGAGATGAGC
TCCCAATAAGATGTTTTTTCTAGATCGGTTTGTTTCCTGTGAGATGTTCG
TATTACTGCTATTATGTTCCTTAGATGTACCGTCCAATGTTTAAGCCTAG
GCTTTCCTTT
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