DC900205

Overview
NameDC900205
Unique NameDC900205
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length760
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13796 contig Csv1_Contig13796:503..1262. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC900205 vs. ExPASy Swiss-Prot
Match: PER23_ARATH (Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.667e-18
Identity = 60/186 (32.26%), Postives = 90/186 (48.39%), Query Frame = 3
Query:    3 GRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPG-LVALLGSHSVGRTHCVKLVHRLYP-----EVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKR--TRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 536
            GRRD  ++   +    LP    +++ +   FA +G++ P  LVAL G H+ G+  C  +  RLY        DP+LNP ++  +   CP    +      V  D  TP   D  YY N+L+ KGL+  D  L +     T P V + + +   FF  F  A+  +    PLTGT+GEIR+ C + N
Sbjct:  151 GRRDSVEAFFALANTALPSPFSTLTQLKTAFADVGLNRPSDLVALSGGHTFGKAQCQFVTPRLYNFNGTNRPDPSLNPTYLVELRRLCPQ---NGNGTVLVNFDSVTPTTFDRQYYTNLLNGKGLIQSDQVLFSTPGADTIPLVNQYSSNTFVFFGAFVDAMIRMGNLKPLTGTQGEIRQNCRVVN 333          
BLAST of DC900205 vs. ExPASy Swiss-Prot
Match: PERP7_BRARA (Peroxidase P7 OS=Brassica rapa PE=1 SV=3)

HSP 1 Score: 91.6633 bits (226), Expect = 4.789e-18
Identity = 53/178 (29.78%), Postives = 89/178 (50.00%), Query Frame = 3
Query:    3 GRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 536
            GRRD + +        +P  + S+S ++  F+A+G+    +VAL G+H++G++ CV    R+Y E +  +N          CP A     A      D  +    DN+Y++N++  +GL+  D  L     T   V+  + S   F  +F+ A+  + + +PLTG+ GEIRKVC   N
Sbjct:  122 GRRDAKTASQAAANSNIPAPSMSLSQLISSFSAVGLSTRDMVALSGAHTIGQSRCVNFRARVYNETN--INAAFATLRQRSCPRAAGSGDA-NLAPLDINSATSFDNSYFKNLMAQRGLLHSDQVLFNGGSTDSIVRGYSNSPSSFNSDFAAAMIKMGDISPLTGSSGEIRKVCGKTN 296          
BLAST of DC900205 vs. ExPASy Swiss-Prot
Match: PER7_ARATH (Peroxidase 7 OS=Arabidopsis thaliana GN=PER7 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.789e-18
Identity = 61/186 (32.80%), Postives = 97/186 (52.15%), Query Frame = 3
Query:    3 GRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMA-KSQDYFFKEFSRAITLLSENNPLTGTK--GEIRKVCNLAN 536
            GRRD + S A  +E+ +P     ++ +LE F + G++   LV L G+H++G+  C  +  RLY        DP+++  +  ++  +C        A + V  D  TP V DN YY N+  + G++  D +L  D RT P VK  A +S   F ++F+ ++  L     LTG    GEIRKVC+ +N
Sbjct:  167 GRRDSKHSYARDVEK-VPSGRRDVTALLETFQSYGLNVLDLVVLSGAHTIGKASCGTIQSRLYNYNATSGSDPSIDAKYADYLQRRCR------WASETVDLDPVTPAVFDNQYYINLQKHMGVLSTDQELVKDPRTAPLVKTFAEQSPQIFRQQFAVSMAKLVNVGVLTGEDRVGEIRKVCSKSN 345          
BLAST of DC900205 vs. ExPASy Swiss-Prot
Match: PER65_ARATH (Peroxidase 65 OS=Arabidopsis thaliana GN=PER65 PE=2 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 4.789e-18
Identity = 56/182 (30.77%), Postives = 90/182 (49.45%), Query Frame = 3
Query:    3 GRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLANKLH 545
            GR+DG +S+A  +   +P  N ++  +   F   G     +VAL G+H++G +HC +   RLY    D  +NP     +   C +   D     +  ND  TP   DN Y++N+    GL+  DH L  D  T+P+V   A ++  FF++F+RA+  L          GE+R+ C+  N L+
Sbjct:  154 GRKDGFESKAHKVRGNVPMANQTVPDIHGIFKKNGFSLREMVALSGAHTIGFSHCKEFSDRLYGSRADKEINPRFAAALKDLCKNHTVDDTIAAF--NDVMTPGKFDNMYFKNLKRGLGLLASDHILIKDNSTKPFVDLYATNETAFFEDFARAMEKLGTVGVKGDKDGEVRRRCDHFNNLN 333          
BLAST of DC900205 vs. ExPASy Swiss-Prot
Match: PER58_ARATH (Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.789e-18
Identity = 56/186 (30.11%), Postives = 95/186 (51.08%), Query Frame = 3
Query:    3 GRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY------PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL--ATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 536
            GRRDGR +        LP   DS+ ++  +F+   +D   LVAL G+H+ GR  C  + +RL+       + DP++ P+ +  +  +CP              D  +P   DN+Y++N+ +N+G++  D  L  +T   T   V + A++Q+ FF  F+R++  +     LTG +GEIR+ C   N
Sbjct:  147 GRRDGRTAIRADAVAALPLGPDSLEILTSKFSVHNLDTTDLVALSGAHTFGRVQCGVINNRLHNFSGNSGQSDPSIEPEFLQTLRRQCPQG---GDLTARANLDPTSPDSFDNDYFKNLQNNRGVIESDQILFSSTGAPTVSLVNRFAENQNEFFTNFARSMIKMGNVRILTGREGEIRRDCRRVN 329          
BLAST of DC900205 vs. ExPASy Swiss-Prot
Match: PER3_ARATH (Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.789e-18
Identity = 59/185 (31.89%), Postives = 97/185 (52.43%), Query Frame = 3
Query:    3 GRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEV-----DPALNPDHVPHM-LHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKK-MAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 536
            GRRDGR S A      +P    +++ +   FA  G+D   LV L G+H++G +HC    +RLY        DPAL+ ++  ++   KCP ++ D K +  V  D G+    D +YY+ +L  +GL   D  L T+  T   + + +  S   FF EF++++  +   N  TG+ G +R+ C++AN
Sbjct:  144 GRRDGRISNAAEALANIPPPTSNITNLQTLFANQGLDLKDLVLLSGAHTIGVSHCSSFTNRLYNFTGRGGQDPALDSEYAANLKSRKCP-SLNDNKTI--VEMDPGSRKTFDLSYYQLVLKRRGLFQSDSALTTNPTTLSNINRILTGSVGSFFSEFAKSMEKMGRINVKTGSAGVVRRQCSVAN 325          
BLAST of DC900205 vs. ExPASy Swiss-Prot
Match: PERA2_ARMRU (Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.067e-17
Identity = 56/181 (30.94%), Postives = 86/181 (47.51%), Query Frame = 3
Query:    3 GRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL--ATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVC 524
            GRRD   +        +P   + +S +  +F+A+G++   LVAL G+H+ GR  C    +RL+        DP LN   +  +   CP    +  A      D  TP   DNNY+ N+  N GL+  D +L       T   V   A +Q  FF+ F++++  +   +PLTG+ GEIR  C
Sbjct:  122 GRRDSLTANLAGANSAIPSPFEGLSNITSKFSAVGLNTNDLVALSGAHTFGRARCGVFNNRLFNFSGTNGPDPTLNSTLLSSLQQLCPQ---NGSASTITNLDLSTPDAFDNNYFANLQSNNGLLQSDQELFSTLGSATIAVVTSFASNQTLFFQAFAQSMINMGNISPLTGSNGEIRLDC 299          
BLAST of DC900205 vs. ExPASy Swiss-Prot
Match: PER17_ARATH (Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.393e-17
Identity = 54/185 (29.19%), Postives = 91/185 (49.19%), Query Frame = 3
Query:    3 GRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEV-----DPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDR-GTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLANK 539
            GR+D   +  +  +  +P    + + +++ F    +    +VAL GSHS+G+  C  ++ RLY +      DPAL P +   +   CP         + V  D   TP V DN Y+++++  +G +  D  L T+  TR YVK  ++ QD FF+ F+  +  L +    +G  GEIR  C + N+
Sbjct:  143 GRKDSLTASQQDSDDIMPSPRANATFLIDLFERFNLSVKDMVALSGSHSIGQGRCFSIMFRLYNQSGSGKPDPALEPSYRKKLDKLCPLG-----GDENVTGDLDATPQVFDNQYFKDLVSGRGFLNSDQTLYTNLVTREYVKMFSEDQDEFFRAFAEGMVKLGDLQ--SGRPGEIRFNCRVVNR 320          
BLAST of DC900205 vs. ExPASy Swiss-Prot
Match: PERN1_TOBAC (Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.820e-17
Identity = 60/187 (32.09%), Postives = 95/187 (50.80%), Query Frame = 3
Query:    3 GRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDY----FFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 536
            GRRDGR SRA      LP   DS+ +   +F   G++   LVAL G+H++G   C  +  RL+        DP+++   +P +   CP    +  A + V  D G+    D +Y+ N+ + +G++  D +L TD  T+ +V++    +      F  EF R++  +S     TGT GEIRKVC+  N
Sbjct:  148 GRRDGRVSRAADAGD-LPAFFDSVDIQKRKFLTKGLNTQDLVALTGAHTIGTAGCAVIRDRLFNFNSTGGPDPSIDATFLPQLRALCPQ---NGDASRRVGLDTGSVNNFDTSYFSNLRNGRGVLESDQKLWTDASTQVFVQRFLGIRGLLGLTFGVEFGRSMVKMSNIEVKTGTNGEIRKVCSAIN 330          
BLAST of DC900205 vs. ExPASy Swiss-Prot
Match: PER34_ARATH (Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.820e-17
Identity = 66/196 (33.67%), Postives = 92/196 (46.94%), Query Frame = 3
Query:    3 GRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPG-LVALLGSHSVGRTHCVKLVHRLYPEV-----DPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL-----ATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLANK---LHD 548
            GRRD  ++  E+    LP    ++  +   F  +G+D P  LVAL G H+ G+  C  ++ RLY        DP LN  ++  +   CP        V +   D  TP V DN YY N+ + KGL+  D +L     ATD  T P V+  A     FF  F  A+  +    P TGT+G+IR  C + N    LHD
Sbjct:  152 GRRDSLQAFLELANANLPAPFFTLPQLKASFRNVGLDRPSDLVALSGGHTFGKNQCQFILDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNRSALVDF---DLRTPTVFDNKYYVNLKERKGLIQSDQELFSSPNATD--TIPLVRAYADGTQTFFNAFVEAMNRMGNITPTTGTQGQIRLNCRVVNSNSLLHD 342          
The following BLAST results are available for this feature:
BLAST of DC900205 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 104
Match NameE-valueIdentityDescription
PER23_ARATH3.667e-1832.26Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=... [more]
PERP7_BRARA4.789e-1829.78Peroxidase P7 OS=Brassica rapa PE=1 SV=3[more]
PER7_ARATH4.789e-1832.80Peroxidase 7 OS=Arabidopsis thaliana GN=PER7 PE=2 ... [more]
PER65_ARATH4.789e-1830.77Peroxidase 65 OS=Arabidopsis thaliana GN=PER65 PE=... [more]
PER58_ARATH4.789e-1830.11Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=... [more]
PER3_ARATH4.789e-1831.89Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 ... [more]
PERA2_ARMRU1.067e-1730.94Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1... [more]
PER17_ARATH1.393e-1729.19Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=... [more]
PERN1_TOBAC1.820e-1732.09Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 S... [more]
PER34_ARATH1.820e-1733.67Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=... [more]

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Properties
Property NameValue
Genbank descriptionDC900205 VSS Citrus sinensis cDNA clone VS28242 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900205 ID=DC900205; Name=DC900205; organism=Citrus sinensis; type=EST; length=760bp
CAGGAAGAAGAGATGGTAGAAAAAGCAGAGCAGAGATACTTGAGCAGTAT
CTCCCAGATCACAATGACAGCATGTCTGTTGTTCTTGAGAGGTTTGCAGC
CATTGGCATTGACGCCCCTGGACTTGTTGCTCTGCTAGGATCTCACAGTG
TTGGCAGAACTCATTGTGTGAAGCTGGTGCACCGTCTGTACCCAGAAGTT
GACCCTGCACTGAACCCTGACCATGTTCCGCATATGCTCCATAAGTGTCC
TGATGCAATCCCAGACCCCAAGGCTGTTCAGTATGTGAGGAATGACCGTG
GCACACCCATGGTGCTGGACAACAACTACTATAGGAACATATTGGACAAC
AAGGGCTTGATGATGGTTGATCATCAGCTAGCCACCGACAAGAGGACAAG
ACCTTATGTTAAGAAGATGGCCAAGAGTCAAGACTACTTCTTCAAGGAAT
TTTCAAGAGCCATTACTCTCCTTTCTGAGAACAACCCTCTCACAGGTACA
AAGGGTGAGATCCGAAAGGTTTGCAATCTTGCCAACAAGCTCCACGACAA
GTCCTAGCTAGCTAACAGCTGTATTAGCTACAACAAGTTAATAGCTCCAA
ATTTTTCTTCCTTGTTTCTTCTATGAGGAAGAAAAGAGTGTGAGATGAGC
TCCCAATAAGATGTTTTTTCTAGATCGGTTTGTTTCCTGTGAGATGTTCG
TATTACTGCTATTATGTTCCTTAGATGTACCGTCCAATGTTTAAGCCTAG
GCTTTCCTTT
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