DC900205

Overview
NameDC900205
Unique NameDC900205
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length760
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13796 contig Csv1_Contig13796:503..1262. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC900205 vs. ExPASy Swiss-Prot
Match: PER66_MAIZE (Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.480e-14
Identity = 51/174 (29.31%), Postives = 78/174 (44.83%), Query Frame = 3
Query:    3 GRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVC 524
            GRRD   S A      LP    S+  +L  +    ++   +VAL G+H++G+  C      +Y + +  +N      +   CP A     +      D  TP   DN YY N+L  KGL+  D +L     T   V+  A S   F   F+ A+  +   +P TGT+G+IR+ C
Sbjct:  149 GRRDSTASFAGQTSD-LPPPTSSLGQLLSAYNKKNLNPTDMVALSGAHTIGQAQCSSFNDHIYNDTN--INSAFAASLRANCPRA----GSTALAPLDTTTPNAFDNAYYTNLLSQKGLLHSDQELFNSGSTDSTVRSFASSTSAFNSAFATAMVKMGNLSPQTGTQGQIRRSC 315          
BLAST of DC900205 vs. ExPASy Swiss-Prot
Match: PER11_ARATH (Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.480e-14
Identity = 50/187 (26.74%), Postives = 93/187 (49.73%), Query Frame = 3
Query:    3 GRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYP--EVDPALNP---DHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDK---RTRPYVKKMAKSQDYFFKEFSRAITLLSE-NNPLTGTKGEIRKVCNLAN 536
            GR+D + +  E+    LP   + +  ++ +F + G+    +VAL+G+H++G+  C     R+Y   +V  ALNP    ++  +   CP +  +  +      D  TP + DN+ Y  +L  +GL+  D ++ T     +TR  V K A+    FF++FS+++  +    N  +   GE+R+ C   N
Sbjct:  150 GRKDSKTASYELATTNLPTPEEGLISIIAKFYSQGLSVEDMVALIGAHTIGKAQCRNFRSRIYGDFQVTSALNPVSETYLASLREICPASSGEGDS-NVTAIDNVTPNLFDNSIYHTLLRGEGLLNSDQEMYTSLFGIQTRRIVSKYAEDPVAFFEQFSKSMVKMGNILNSESLADGEVRRNCRFVN 335          
BLAST of DC900205 vs. ExPASy Swiss-Prot
Match: PER10_ARATH (Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.157e-14
Identity = 49/181 (27.07%), Postives = 84/181 (46.41%), Query Frame = 3
Query:    3 GRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYP-----EVDPALNPDHVPHMLHKCPDAIP--DPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVC 524
            GRRD   +  +     LP   +++  +  +F  +G+D   +V L G+H++G   C  + HRL+      + DP L       +L K  D  P  D    +    D  + +  DN YY N+++N GL+  D  L TD      VK  +++   F ++F+ ++  +     +TG+ G IR  C
Sbjct:  168 GRRDSLTASEQAANTNLPSPFEALENITAKFVTLGLDLKDVVVLSGAHTIGFAQCFVIKHRLFNFKGSGQPDPNLAASSA--LLSKLKDTCPNVDSSDSKLAALDAASSVKFDNAYYVNLMNNIGLLDSDQTLMTDPTAAALVKSYSENPYLFSRDFAVSMVKMGNIGVMTGSDGVIRGKC 346          
BLAST of DC900205 vs. ExPASy Swiss-Prot
Match: PER67_ARATH (Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.221e-13
Identity = 50/179 (27.93%), Postives = 88/179 (49.16%), Query Frame = 3
Query:    3 GRRDGRKSR-AEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 536
            GRRD   +  A      +P    ++S ++ RF A G+    +VAL G+H++GR  CV   +R+Y   +  ++          CP A       +    D  +P   D+ +Y+ +L  KGL+  D  L  +  T   V   + + + F+++F+RA+  + + +PLTG+ G+IR+ C   N
Sbjct:  141 GRRDSTTANFAAANSGVIPPPITTLSNLINRFKAQGLSTRDMVALSGAHTIGRAQCVTFRNRIYNASN--IDTSFAISKRRNCP-ATSGSGDNKKANLDVRSPDRFDHGFYKQLLSKKGLLTSDQVLFNNGPTDSLVIAYSHNLNAFYRDFARAMIKMGDISPLTGSNGQIRQNCRRPN 316          
BLAST of DC900205 vs. ExPASy Swiss-Prot
Match: PER30_ARATH (Peroxidase 30 OS=Arabidopsis thaliana GN=PER30 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.221e-13
Identity = 50/183 (27.32%), Postives = 87/183 (47.54%), Query Frame = 3
Query:    3 GRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAK-SQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLA 533
            GRRDGR S        +P    + + +   F   G++   LV L G+H++G +HC  +  RLY      + DP+L+  +  ++      ++ D   +  +  D G+    D +YYR +L  +GL   D  L T+  T   +  +   S+  FFK F++++  +      TG+ G IR  C++A
Sbjct:  147 GRRDGRISNKTEATNNIPPPTSNFTTLQRLFKNQGLNLKDLVLLSGAHTIGVSHCSSMNTRLYNFSTTVKQDPSLDSQYAANLKANKCKSLNDNSTI--LEMDPGSSRSFDLSYYRLVLKRRGLFQSDSALTTNSATLKVINDLVNGSEKKFFKAFAKSMEKMGRVKVKTGSAGVIRTRCSVA 327          
BLAST of DC900205 vs. ExPASy Swiss-Prot
Match: PER8_ARATH (Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.082e-13
Identity = 55/180 (30.56%), Postives = 83/180 (46.11%), Query Frame = 3
Query:    3 GRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGS-HSVGRTHCVKLVHRLY-PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 536
            GRRDG +S    ++   P    S++  ++ F +IG +   +VAL+G  H+VG  HC     R+  P++D  L        L K      DP        D+ TP  +DN  YR ++  + ++ +D  L  D  TR  V   A +   F + F+ A+  + E   LTG  GEIR  C   N
Sbjct:  141 GRRDGLRSNPSDVKLLGP--TVSVATSIKAFKSIGFNVSTMVALIGGGHTVGVAHCSLFQDRIKDPKMDSKLRAK-----LKKSCRGPNDPSVFM----DQNTPFRVDNEIYRQMIQQRAILRIDDNLIRDGSTRSIVSDFAYNNKLFKESFAEAMQKMGEIGVLTGDSGEIRTNCRAFN 309          
BLAST of DC900205 vs. ExPASy Swiss-Prot
Match: PER13_ARATH (Peroxidase 13 OS=Arabidopsis thaliana GN=PER13 PE=1 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 4.639e-13
Identity = 51/183 (27.87%), Postives = 90/183 (49.18%), Query Frame = 3
Query:    3 GRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVAL-LGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRP----YVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 536
            GRRDG  +  +  +  LPD  DS++ +  +F   G+    LV L  G+H++G T C  ++ RL  + DP +NP+    +  KCP        +     D  +  V DN  ++NI + +G+++ D  L  D   +     Y++    S+  F  +F++A+  +       G +GEIR++C+  N
Sbjct:  142 GRRDGLIANVDHAKN-LPDVQDSINTLKSKFREKGLSDQDLVLLSAGAHTIGTTACFFVIPRLDAQ-DPTINPEFFQILRSKCPQGGDVNVRIPL---DWDSQFVFDNQIFQNIKNGRGVILSDSVLYQDNNMKKIIDSYLETNQSSKANFAADFTKAMIKMGAIGVKIGAEGEIRRLCSATN 319          
BLAST of DC900205 vs. ExPASy Swiss-Prot
Match: PERA_IPOBA (Anionic peroxidase OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.059e-13
Identity = 50/178 (28.09%), Postives = 83/178 (46.63%), Query Frame = 3
Query:    3 GRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 536
            GR+D R +        L   N++++  L +FAA G +   +VALLGSH++G   C  L       +   +NP  V  +   C   +    A   V  D  TP   D  Y+ ++++++GL+  D++L     T   V++   +   F  +F+ A+  +S   P  G   EIR VC+  N
Sbjct:  180 GRKDARTANFTGANTQLVGPNENLTSQLTKFAAKGFNGTEMVALLGSHTIGFARCPLLC------ISTFINPARVSTLNCNCSGTV---NATGLVGLDP-TPTTWDQRYFSDVVNDQGLLFSDNELLKGNTTNAAVRRYRDAMGAFLTDFAAAMVKMSNLPPSPGVALEIRDVCSRVN 347          
BLAST of DC900205 vs. ExPASy Swiss-Prot
Match: PER59_ARATH (Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 7.913e-13
Identity = 52/191 (27.23%), Postives = 88/191 (46.07%), Query Frame = 3
Query:    3 GRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYP-----EVDPALNPDHVPHMLHKCP----DAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATD----KRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 536
            GR+DG  +        LP   + +  ++ +F A+ ++   +VAL G+H+ G+  C    +RL+        D  L    + ++   CP      I  P        DR T    DNNY++N+L+ KGL+  D  L +       T+  V+  ++SQ  FF++F+ A  ++   N   G  GE+R  C + N
Sbjct:  147 GRKDGLVANQNSANN-LPSPFEPLDAIIAKFVAVNLNITDVVALSGAHTFGQAKCAVFSNRLFNFTGLGNPDATLETSLLSNLQTVCPLGGNSNITAPL-------DRSTTDTFDNNYFKNLLEGKGLLSSDQILFSSDLAVNTTKKLVEAYSRSQSLFFRDFTCA--MIRMGNISNGASGEVRTNCRVIN 327          
BLAST of DC900205 vs. ExPASy Swiss-Prot
Match: PERN_ARMRU (Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.033e-12
Identity = 50/187 (26.74%), Postives = 89/187 (47.59%), Query Frame = 3
Query:    3 GRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATD----KRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 536
            GR+DG  +        LP   + +  ++ +FAA+G++   +VAL G+H+ G+  C    +RL+        D  L    +  +   CP      K       DR +    DNNY++N+L+ KGL+  D  L +       T+  V+  ++SQ  FF++F+   +++   + + G  GE+R  C + N
Sbjct:  147 GRKDGLVANQSSANN-LPSPFEPLDAIIAKFAAVGLNVTDVVALSGAHTFGQAKCDLFSNRLFNFTGAGTPDSTLETTLLSDLQTVCPIGGNGNKTAPL---DRNSTDAFDNNYFKNLLEGKGLLSSDQILFSSDLAVNTTKRLVEAYSRSQYLFFRDFT--CSMIRMGSLVNGASGEVRTNCRVIN 327          
The following BLAST results are available for this feature:
BLAST of DC900205 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 104
Match NameE-valueIdentityDescription
PER66_MAIZE5.480e-1429.31Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1[more]
PER11_ARATH5.480e-1426.74Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=... [more]
PER10_ARATH7.157e-1427.07Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=... [more]
PER67_ARATH1.221e-1327.93Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=... [more]
PER30_ARATH1.221e-1327.32Peroxidase 30 OS=Arabidopsis thaliana GN=PER30 PE=... [more]
PER8_ARATH2.082e-1330.56Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 ... [more]
PER13_ARATH4.639e-1327.87Peroxidase 13 OS=Arabidopsis thaliana GN=PER13 PE=... [more]
PERA_IPOBA6.059e-1328.09Anionic peroxidase OS=Ipomoea batatas PE=1 SV=1[more]
PER59_ARATH7.913e-1327.23Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=... [more]
PERN_ARMRU1.033e-1226.74Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionDC900205 VSS Citrus sinensis cDNA clone VS28242 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900205 ID=DC900205; Name=DC900205; organism=Citrus sinensis; type=EST; length=760bp
CAGGAAGAAGAGATGGTAGAAAAAGCAGAGCAGAGATACTTGAGCAGTAT
CTCCCAGATCACAATGACAGCATGTCTGTTGTTCTTGAGAGGTTTGCAGC
CATTGGCATTGACGCCCCTGGACTTGTTGCTCTGCTAGGATCTCACAGTG
TTGGCAGAACTCATTGTGTGAAGCTGGTGCACCGTCTGTACCCAGAAGTT
GACCCTGCACTGAACCCTGACCATGTTCCGCATATGCTCCATAAGTGTCC
TGATGCAATCCCAGACCCCAAGGCTGTTCAGTATGTGAGGAATGACCGTG
GCACACCCATGGTGCTGGACAACAACTACTATAGGAACATATTGGACAAC
AAGGGCTTGATGATGGTTGATCATCAGCTAGCCACCGACAAGAGGACAAG
ACCTTATGTTAAGAAGATGGCCAAGAGTCAAGACTACTTCTTCAAGGAAT
TTTCAAGAGCCATTACTCTCCTTTCTGAGAACAACCCTCTCACAGGTACA
AAGGGTGAGATCCGAAAGGTTTGCAATCTTGCCAACAAGCTCCACGACAA
GTCCTAGCTAGCTAACAGCTGTATTAGCTACAACAAGTTAATAGCTCCAA
ATTTTTCTTCCTTGTTTCTTCTATGAGGAAGAAAAGAGTGTGAGATGAGC
TCCCAATAAGATGTTTTTTCTAGATCGGTTTGTTTCCTGTGAGATGTTCG
TATTACTGCTATTATGTTCCTTAGATGTACCGTCCAATGTTTAAGCCTAG
GCTTTCCTTT
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