DC900201

Overview
NameDC900201
Unique NameDC900201
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length804
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5643 contig Csv1_Contig5643:1..805. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC900201 vs. ExPASy Swiss-Prot
Match: RD19A_ARATH (Cysteine proteinase RD19a OS=Arabidopsis thaliana GN=RD19A PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 6.217e-35
Identity = 85/204 (41.67%), Postives = 109/204 (53.43%), Query Frame = 1
Query:   16 CGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTD--------QNQGCNGGLMELAFEFIKKKGGVTTEAKYPYQANDG-TCDVSKESSPAVSIDGHENVPANHEDALLKAVAKQPVSVAIDAGSSDFQFYSEGVFTGE-CGTELNHGVAAVGYGTT------LDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGI 579
            CGSCW+FS   A+EG N + T KLVSLSEQ+LVDCD +         + GCNGGLM  AFE+  K GG+  E  YPY   DG TC + K S    S+     +  + E      V   P++VAI+AG    Q Y  GV     C   LNHGV  VGYG             YWI++NSWG  WGE G+ ++ +G    + +CG+
Sbjct:  156 CGSCWSFSATGALEGANFLATGKLVSLSEQQLVDCDHECDPEEADSCDSGCNGGLMNSAFEYTLKTGGLMKEEDYPYTGKDGKTCKLDK-SKIVASVSNFSVISIDEEQIAANLVKNGPLAVAINAGY--MQTYIGGVSCPYICTRRLNHGVLLVGYGAAGYAPARFKEKPYWIIKNSWGETWGENGFYKICKG----RNICGV 352          
BLAST of DC900201 vs. ExPASy Swiss-Prot
Match: CPR1_DROME (Putative cysteine proteinase CG12163 OS=Drosophila melanogaster GN=CG12163 PE=2 SV=2)

HSP 1 Score: 147.132 bits (370), Expect = 1.060e-34
Identity = 84/203 (41.38%), Postives = 119/203 (58.62%), Query Frame = 1
Query:   16 CGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANHEDALLK-AVAKQPVSVAIDAGSSDFQFYSEGV---FTGECGTE-LNHGVAAVGYGTT-----LDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAMEAS 594
            CGSCWAFS    +EG+  + T +L   SEQEL+DCDT  +  CNGGLM+ A++ IK  GG+  EA+YPY+A    C  ++  S  V + G  ++P  +E A+ +  +A  P+S+ I+A +   QFY  GV   +   C  + L+HGV  VGYG +          YWIV+NSWGP WGE+GY R+ RG       CG++  A+
Sbjct:  415 CGSCWAFSVTGNIEGLYAVKTGELKEFSEQELLDCDT-TDSACNGGLMDNAYKAIKDIGGLEYEAEYPYKAKKNQCHFNRTLS-HVQVAGFVDLPKGNETAMQEWLLANGPISIGINANA--MQFYRGGVSHPWKALCSKKNLDHGVLVVGYGVSDYPNFHKTLPYWIVKNSWGPRWGEQGYYRVYRG----DNTCGVSEMAT 609          
BLAST of DC900201 vs. ExPASy Swiss-Prot
Match: CATR_MOUSE (Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.060e-34
Identity = 82/203 (40.39%), Postives = 115/203 (56.65%), Query Frame = 1
Query:   13 ECGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQ-NQGCNGGLMELAFEFIKKKGGVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANHEDALLKAVAK-QPVSVAIDAGSSDFQFYSEGVF-TGECGTE-LNHGVAAVGY---GTTLDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAMEASYP 600
            +C +CWAF+   A+E      T KL  LS Q LVDC   Q N GC GG    AF+++   GG+ +EA YPY+  DG C  + ++S A  I G  ++P + ED L+ AVA   P++  IDA    F+ Y  G++    C ++ + HGV  VGY   G   DG  YW+++NSWG  WG +GY+++ +   DK   CGIA  A YP
Sbjct:  135 DCDACWAFAVTGAIEAQAIWQTGKLTPLSVQNLVDCSKPQGNNGCLGGDTYNAFQYVLHNGGLESEATYPYEGKDGPCRYNPKNSKA-EITGFVSLPQS-EDILMAAVATIGPITAGIDASHESFKNYKGGIYHEPNCSSDTVTHGVLVVGYGFKGIETDGNHYWLIKNSWGKRWGIRGYMKLAK---DKNNHCGIASYAHYP 332          
BLAST of DC900201 vs. ExPASy Swiss-Prot
Match: A494_ARATH (Probable cysteine proteinase A494 OS=Arabidopsis thaliana GN=At2g21430 PE=2 SV=2)

HSP 1 Score: 147.132 bits (370), Expect = 1.060e-34
Identity = 82/203 (40.39%), Postives = 108/203 (53.20%), Query Frame = 1
Query:   16 CGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTD--------QNQGCNGGLMELAFEFIKKKGGVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANHEDALLKAVAKQPVSVAIDAGSSDFQFYSEGVFTGE-CGTELNHGVAAVGYGTT------LDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGI 579
            CGSCW+FST  A+EG + + T KLVSLSEQ+LVDCD +         + GCNGGLM  AFE+  K GG+  E  YPY   DG       S    S+     V  N +      +   P++VAI+A  +  Q Y  GV     C   LNHGV  VGYG+       L    YWI++NSWG  WGE G+ ++ +G    + +CG+
Sbjct:  153 CGSCWSFSTTGALEGAHFLATGKLVSLSEQQLVDCDHECDPEEEGSCDSGCNGGLMNSAFEYTLKTGGLMREKDYPYTGTDGGSCKLDRSKIVASVSNFSVVSINEDQIAANLIKNGPLAVAINA--AYMQTYIGGVSCPYICSRRLNHGVLLVGYGSAGFSQARLKEKPYWIIKNSWGESWGENGFYKICKG----RNICGV 349          
BLAST of DC900201 vs. ExPASy Swiss-Prot
Match: CATV_GVCP (Viral cathepsin OS=Cydia pomonella granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.385e-34
Identity = 89/194 (45.88%), Postives = 112/194 (57.73%), Query Frame = 1
Query:   13 ECGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANHEDALLK-AVAKQPVSVAIDAGSSDFQFYSEGVF-TGECGTELNHGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAME 588
            ECGSCWAFSTIA +E + +I  +K ++LSEQ LV+CD + N GC GGLM  A E I ++GGV +    PY   DG C   K+S   +SI G       +E+ L +  V   P+SVAID   SD   Y  G+    E    LNH V  VGYG   D   YWI++NSWG EWGE+GY R+QR     K  CG+  E
Sbjct:  144 ECGSCWAFSTIANIESLYNIKYDKALNLSEQHLVNCD-NINNGCAGGLMHWALESILQEGGVVSAENEPYYGFDGVC---KKSPFELSISGSRRYVLQNENKLRELLVVNGPISVAIDV--SDLINYKAGIADICENNEGLNHAVLLVGYGVKND-VPYWILKNSWGAEWGEEGYFRVQR----DKNSCGMMNE 326          
BLAST of DC900201 vs. ExPASy Swiss-Prot
Match: CATL2_PARTE (Cathepsin L 2 OS=Paramecium tetraurelia GN=GSPATT00022898001 PE=3 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 1.809e-34
Identity = 89/198 (44.95%), Postives = 114/198 (57.58%), Query Frame = 1
Query:   16 CGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTD-QNQGCNGGLMELAFEFIKKKGGVTTEAK-YPYQANDGTCDVSKESSPAVSIDGHENVPANHEDALLKAVAKQPVSVAIDAGSSDFQFYSEGVFTGECGTELNHGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAMEASYPI 603
            CGSCWAFS + A+E    I  NK   LSEQ+LVDC     N+GCNGG M+ AFE++   G    EAK YPY A DGTC  S +  P   + G  ++ +   D L +A+ ++ VSVA+DA  + +QFY  GV + +C   LNHGV  V  G   DG   W +RNSWG  WGE G+IR+  G       CGI    S+PI
Sbjct:  132 CGSCWAFSAVGALEINTDIELNKKYELSEQDLVDCSGPYDNEGCNGGWMDSAFEYVADNG--LAEAKDYPYTAKDGTCKTSVK-RPYTHVQGFTDIDSC--DELAQAIQERTVSVAVDA--NPWQFYRSGVLS-KCTKNLNHGVVLV--GVQADGA--WKIRNSWGSSWGEAGHIRLAGG-----DTCGICAAPSFPI 312          
BLAST of DC900201 vs. ExPASy Swiss-Prot
Match: CYSP_PEA (Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.363e-34
Identity = 85/204 (41.67%), Postives = 112/204 (54.90%), Query Frame = 1
Query:   16 CGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCD--TDQNQ------GCNGGLMELAFEFIKKKGGVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANHEDALLKAVAKQPVSVAIDAGSSDFQFYSEGVFTGE--CGTELNHGVAAVGYG------TTLDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGI 579
            CGSCWAFST  A+EG +++ T KLVSLSEQ+LVDCD   D  Q      GCNGGLM  AFE++ + GGV  E  Y Y   DG+C   K S    S+     V  + +      V   P++VAI+A  +  Q Y  GV        + L+HGV  VG+G        L    YWI++NSWG  WGE+GY ++ RG    + +CG+
Sbjct:  153 CGSCWAFSTTGALEGAHYLATGKLVSLSEQQLVDCDHVCDPEQAGSCDSGCNGGLMNNAFEYLLESGGVVQEKDYAYTGRDGSCKFDK-SKVVASVSNFSVVTLDEDQIAANLVKNGPLAVAINA--AWMQTYMSGVSCPYVCAKSRLDHGVLLVGFGKGAYAPIRLKEKPYWIIKNSWGQNWGEQGYYKICRG----RNVCGV 349          
BLAST of DC900201 vs. ExPASy Swiss-Prot
Match: CPP2_ENTHI (Cysteine proteinase 2 OS=Entamoeba histolytica GN=CPP2 PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 6.874e-34
Identity = 85/206 (41.26%), Postives = 118/206 (57.28%), Query Frame = 1
Query:   13 ECGSCWAFSTIAAVEGINHIMTNK-----LVSLSEQELVDCDTDQ-NQGCNGGLMELAFEFIKKKGGVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANHEDALLKAVAKQPVSVAIDAGSSDFQFYSEGVFTG-ECGTE---LNHGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAMEASYP 600
            +CGSC+ F ++AA+EG   ++  K      + LSE+ +V C  D  N GCNGGL    +++I + G V  E+ YPY  +D TC  + +S     I G+  VP N+E  L  A+++  V V+IDA S+ FQ Y  G +T  +C      LNH V AVGYG  +DG + WIVRNSWG  WG+KGYI M      +   CG+A +  YP
Sbjct:  114 QCGSCYTFGSLAALEG--RLLIEKGGDANTLDLSEEHMVQCTRDNGNNGCNGGLGSNVYDYIIEHG-VAKESDYPYTGSDSTCKTNVKSF--AKITGYTKVPRNNEAELKAALSQGLVDVSIDASSAKFQLYKSGAYTDTKCKNNYFALNHEVCAVGYGV-VDGKECWIVRNSWGTGWGDKGYINM----VIEGNTCGVATDPLYP 309          
BLAST of DC900201 vs. ExPASy Swiss-Prot
Match: CYSP_TRYBB (Cysteine proteinase OS=Trypanosoma brucei brucei PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 8.978e-34
Identity = 89/217 (41.01%), Postives = 122/217 (56.22%), Query Frame = 1
Query:   13 ECGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFI--KKKGGVTTEAKYPYQANDG---TCDVSKESSPAVSIDGHENVPANHEDALLKAVAKQ-PVSVAIDAGSSDFQFYSEGVFTGECGTELNHGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAMEASYPIKKSATNPTGPSDYP 645
            +CGSCWAFSTI  +EG   +  N LVSLSEQ LV CDT  + GCNGGLM+ AF +I     G V TEA YPY + +G    C ++     A +I  H ++P + EDA+   +A+  P+++A+DA S  F  Y+ G+ T     +L+HGV  VGY        YWI++NSW   WGE GYIR+++G +     C +    S  +    T P  P   P
Sbjct:  146 QCGSCWAFSTIGNIEGQWQVAGNPLVSLSEQMLVSCDT-IDSGCNGGLMDNAFNWIVNSNGGNVFTEASYPYVSGNGEQPQCQMNGHEIGA-AITDHVDLPQD-EDAIAAYLAENGPLAIAVDAES--FMDYNGGILTSCTSKQLDHGVLLVGYNDN-SNPPYWIIKNSWSNMWGEDGYIRIEKGTNQ----CLMNQAVSSAVVGGPTPPPPPPPPP 352          
BLAST of DC900201 vs. ExPASy Swiss-Prot
Match: CYSP1_MAIZE (Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 8.978e-34
Identity = 79/203 (38.92%), Postives = 110/203 (54.19%), Query Frame = 1
Query:   16 CGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTD--------QNQGCNGGLMELAFEFIKKKGGVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANHEDALLKAVAKQPVSVAIDAGSSDFQFYSEGVFTGE-CGTELNHGVAAVGYGTT------LDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGI 579
            CGSCW+FS   A+EG +++ T KL  LSEQ+ VDCD +         + GCNGGLM  AF +++K GG+ +E  YPY  +DG C   K S    S+     V  +        +   P+++ I+A  +  Q Y  GV     CG  L+HGV  VGYG +      L    YWI++NSWG  WGE GY ++ RG S+ +  CG+
Sbjct:  158 CGSCWSFSASGALEGAHYLATGKLEVLSEQQFVDCDHECDSSEPDSCDSGCNGGLMTTAFSYLQKAGGLESEKDYPYTGSDGKCKFDK-SKIVASVQNFSVVSVDEAQISANLIKHGPLAIGINA--AYMQTYIGGVSCPYICGRHLDHGVLLVGYGASGFAPIRLKDKPYWIIKNSWGENWGENGYYKICRG-SNVRNKCGV 356          
The following BLAST results are available for this feature:
BLAST of DC900201 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 179
Match NameE-valueIdentityDescription
RD19A_ARATH6.217e-3541.67Cysteine proteinase RD19a OS=Arabidopsis thaliana ... [more]
CPR1_DROME1.060e-3441.38Putative cysteine proteinase CG12163 OS=Drosophila... [more]
CATR_MOUSE1.060e-3440.39Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1[more]
A494_ARATH1.060e-3440.39Probable cysteine proteinase A494 OS=Arabidopsis t... [more]
CATV_GVCP1.385e-3445.88Viral cathepsin OS=Cydia pomonella granulosis viru... [more]
CATL2_PARTE1.809e-3444.95Cathepsin L 2 OS=Paramecium tetraurelia GN=GSPATT0... [more]
CYSP_PEA2.363e-3441.67Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1[more]
CPP2_ENTHI6.874e-3441.26Cysteine proteinase 2 OS=Entamoeba histolytica GN=... [more]
CYSP_TRYBB8.978e-3441.01Cysteine proteinase OS=Trypanosoma brucei brucei P... [more]
CYSP1_MAIZE8.978e-3438.92Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=... [more]

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Properties
Property NameValue
Genbank descriptionDC900201 VSS Citrus sinensis cDNA clone VS28238 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900201 ID=DC900201; Name=DC900201; organism=Citrus sinensis; type=EST; length=804bp
AATTCGGCACGAGAATGCGGTAGCTGCTGGGCTTTTTCAACAATTGCAGC
AGTAGAGGGCATTAATCACATTATGACAAATAAGCTCGTTTCTTTGTCTG
AGCAAGAGTTAGTTGATTGTGACACTGATCAAAACCAAGGATGTAATGGA
GGGCTAATGGAATTGGCATTTGAGTTCATCAAGAAAAAGGGTGGCGTAAC
AACAGAGGCTAAGTACCCTTACCAAGCTAATGATGGAACATGTGACGTTT
CAAAGGAAAGTTCCCCAGCAGTGTCAATTGACGGACATGAAAATGTACCT
GCTAATCACGAGGATGCTCTGCTTAAGGCAGTTGCAAAACAGCCTGTGTC
AGTAGCCATAGATGCCGGCAGTTCAGATTTCCAGTTCTATTCAGAGGGTG
TATTTACTGGAGAATGTGGCACAGAGCTGAATCATGGAGTTGCAGCTGTG
GGCTACGGTACAACACTCGATGGAACCAAGTATTGGATAGTGAGGAACTC
ATGGGGACCTGAATGGGGAGAGAAGGGTTACATCAGAATGCAGCGCGGCA
TCTCAGACAAAAAGGGACTCTGTGGTATTGCAATGGAAGCTTCATATCCC
ATCAAGAAATCTGCAACAAACCCAACAGGACCTTCAGATTATCCTAAGGA
TGAGCTCTAGACACGGTTCACTATTGTCTTTGGCTTTTCTCTGCATTTCA
AGCTCAGCGGTTATCTCTTCTGTGTTAAAGTTGCATGTAATATGCCCTTG
TGATTCATGATTGAATAATGTTTCGATTTATGCAAATAAAGCCAACATTT
TACA
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