DC900201

Overview
NameDC900201
Unique NameDC900201
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length804
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5643 contig Csv1_Contig5643:1..805. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC900201 vs. ExPASy Swiss-Prot
Match: CATV_NPVLD (Viral cathepsin OS=Lymantria dispar multicapsid nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 8.978e-34
Identity = 77/183 (42.08%), Postives = 111/183 (60.66%), Query Frame = 1
Query:   16 CGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVTTEAKYPYQANDGTCDVSKESSPAVSIDG-HENVPANHEDA--LLKAVAKQPVSVAIDAGSSDFQFYSEGVFTGECGTELNHGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRGIS 555
            CG+CWAF+T+A+VE    +  N+L+ LSEQ+L+DCD+  + GCNGGL+  AFE I + GGV TE  YP+   +  C + +     VS+ G +  V  N E    LL+AV   P+ +AIDA  +D   Y  GV +      LNH V  VGYG   +G  YW+ +N+WG +WGE GY R+++ ++
Sbjct:  165 CGACWAFATLASVESQFAMRHNRLIDLSEQQLIDCDS-VDMGCNGGLLHTAFEEIMRMGGVQTELDYPFVGRNRRCGLDRHRPYVVSLVGCYRYVMVNEEKLKDLLRAVG--PIPMAIDA--ADIVNYYRGVISSCENNGLNHAVLLVGYGVE-NGVPYWVFKNTWGDDWGENGYFRVRQNVN 341          
BLAST of DC900201 vs. ExPASy Swiss-Prot
Match: CPP3_ENTHI (Cysteine proteinase 3 (Fragment) OS=Entamoeba histolytica GN=CPNP PE=1 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.531e-33
Identity = 84/204 (41.18%), Postives = 115/204 (56.37%), Query Frame = 1
Query:   13 ECGSCWAFSTIAAVEG---INHIMTNKLVSLSEQELVDCDTDQ-NQGCNGGLMELAFEFIKKKGGVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANHEDALLKAVAKQPVSVAIDAGSSDFQFYSEGVFTG-ECGTE---LNHGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAMEASYP 600
            +CGSC+ F ++AA+EG   I        + LSE+ LV C  D  N GCNGGL    +++I + G V  E+ YPY   D TC  + ++     I G+  VP N+E  L  A+++  V V+IDA S+ FQ Y  G ++  +C      LNH V AVGYG  +DG + WIVRNSWG  WG+KGYI M      +   CG+A +  YP
Sbjct:  107 QCGSCYTFGSLAALEGRLLIEKGGNANTLDLSEEHLVQCTRDNGNNGCNGGLGSNVYDYIIQNG-VAKESDYPYTGTDSTCKTNVKAF--AKITGYNKVPRNNEAELKAALSQGLVDVSIDASSAKFQLYKSGAYSDTKCKNNFFALNHEVCAVGYGV-VDGKECWIVRNSWGTGWGDKGYINM----VIEGNTCGVATDPLYP 302          
BLAST of DC900201 vs. ExPASy Swiss-Prot
Match: CATL1_PARTE (Cathepsin L 1 OS=Paramecium tetraurelia GN=GSPATT00020990001 PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.612e-33
Identity = 86/198 (43.43%), Postives = 113/198 (57.07%), Query Frame = 1
Query:   16 CGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTD-QNQGCNGGLMELAFEFIKKKGGVTTEAK-YPYQANDGTCDVSKESSPAVSIDGHENVPANHEDALLKAVAKQPVSVAIDAGSSDFQFYSEGVFTGECGTELNHGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAMEASYPI 603
            CGSCWAFS + A+E    I  N+   LSEQ+LVDC     N GCNGG M+ AFE++   G    EAK YPY A DGTC  S +  P   + G +++ +   D L + + ++ V+VA+DA  + +QFY  GV + +C   LNHGV  V  G   DG   W +RNSWG  WGE G+IR+  G       CGI    S+PI
Sbjct:  132 CGSCWAFSAVGALEINTDIELNRKYELSEQDLVDCSGPYDNDGCNGGWMDSAFEYVADNG--LAEAKDYPYTAKDGTCKTSVK-RPYTHVQGFKDIDSC--DELAQTIQERTVAVAVDA--NPWQFYRSGVLS-KCTKNLNHGVVLV--GVQADGA--WKIRNSWGSSWGEAGHIRLAGG-----DTCGICAAPSFPI 312          
BLAST of DC900201 vs. ExPASy Swiss-Prot
Match: CATV_NPVAH (Viral cathepsin OS=Adoxophyes honmai nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 4.456e-33
Identity = 76/189 (40.21%), Postives = 108/189 (57.14%), Query Frame = 1
Query:   16 CGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANHEDALLK-AVAKQPVSVAIDAGSSDFQFYSEGVFTGECGTELNHGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGI 579
            CGSCWA + +  +E +  I  N L++LSEQ+L+DCD+  N  C+GGLM  AFE +   GG+  E  YPYQ   G C +  +   A+S+   +     +E+ L K  +   P+++AIDA S     YS+G+        LNH V  VGYGT   G  YW ++NSWG +WGE GY R++R I+     CG+
Sbjct:  147 CGSCWAHAAVGTLETLYAIKHNYLINLSEQQLIDCDS-ANMACDGGLMHTAFEQLMNAGGLMEEIDYPYQGTKGVCKIDNKKF-ALSVSSCKRYIFQNEENLKKELITMGPIAMAIDAAS--ISTYSKGIIHFCENLGLNHAVLLVGYGTE-GGVSYWTLKNSWGSDWGEDGYFRVKRNIN----ACGL 326          
BLAST of DC900201 vs. ExPASy Swiss-Prot
Match: CATV_NPVHC (Viral cathepsin OS=Hyphantria cunea nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.296e-32
Identity = 80/193 (41.45%), Postives = 111/193 (57.51%), Query Frame = 1
Query:   16 CGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVTTEAKYPYQANDGTC--DVSKESSPAVSIDGHENVPANHEDALLKAVAKQPVSVAIDAGSSDFQFYSEGVFTGECGTELNHGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAME 588
            CG+CWAF+T+A++E    I  N+L++LSEQ+L+DCD   + GCNGGL+  A+E + + GGV  E  YPY+ +DG C  DV+K          +  V       LL+ V   P+ VAIDA  SD   Y  G+         NH V  VGYG   +   YWI++N+WG +WGE+GY R+Q+ I+     CGI  E
Sbjct:  134 CGACWAFATLASLESQFAIKHNQLINLSEQQLIDCDY-VDAGCNGGLLHTAYEAVMQMGGVQAENDYPYEGSDGNCRVDVAKFVVKVKKCYRYIAVFEEKLKDLLRIVG--PIPVAIDA--SDIVNYRRGIMRYCSNYGFNHAVLLVGYGVE-NNVPYWILKNTWGEDWGEQGYFRVQQNIN----ACGIRNE 316          
BLAST of DC900201 vs. ExPASy Swiss-Prot
Match: CPP1_ENTHI (Cysteine proteinase 1 OS=Entamoeba histolytica GN=CPP1 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.211e-32
Identity = 83/203 (40.89%), Postives = 111/203 (54.68%), Query Frame = 1
Query:   16 CGSCWAFSTIAAVEG---INHIMTNKLVSLSEQELVDCDT-DQNQGCNGGLMELAFEFIKKKGGVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANHEDALLKAVAKQPVSVAIDAGSSDFQFYSEGVFTG-ECGTE---LNHGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAMEASYP 600
            CGSC+ F +IAA+EG   I     ++ + LSE+ +V C   D N GCNGGL    + +I + G +  E+ YPY  +D TC    +      I  +  V  N+E  L  A+++  V V+IDA S  FQ Y  G +T  +C      LNH V AVGYG  +DG + WIVRNSWG  WGEKGYI M      +   CG+A +  YP
Sbjct:  115 CGSCYTFGSIAALEGRLLIEKGGDSETLDLSEEHMVQCTREDGNNGCNGGLGSNVYNYIMENG-IAKESDYPYTGSDSTC--RSDVKAFAKIKSYNRVARNNEVELKAAISQGLVDVSIDASSVQFQLYKSGAYTDTQCKNNYFALNHEVCAVGYGV-VDGKECWIVRNSWGTGWGEKGYINM----VIEGNTCGVATDPLYP 309          
BLAST of DC900201 vs. ExPASy Swiss-Prot
Match: CATV_NPVHZ (Viral cathepsin OS=Heliothis zea nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.211e-32
Identity = 77/192 (40.10%), Postives = 110/192 (57.29%), Query Frame = 1
Query:   16 CGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANHEDALLKAV-AKQPVSVAIDAGSSDFQFYSEGVFTGECGTELNHGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAME 588
            CGSCWAF  I  +E    I  NKL+ LSEQ+L+DCD + + GCNGGLM LAF+ +   GGV TEA YPYQ ++  C +      AV ++         E+ L + V    PV++A+DA   D   Y  G+       +LNH V  +G+G   +   YWI++NSWG +WGE G++R++R ++     CG+  E
Sbjct:  177 CGSCWAFVAIGNIESQYAIRHNKLIDLSEQQLLDCD-EVDLGCNGGLMHLAFQELLLMGGVETEADYPYQGSEQMCTLDNRKI-AVKLNSCFKYDIRDENKLKELVYTTGPVAIAVDA--MDIINYRRGILNQCHIYDLNHAVLLIGWGIE-NNVPYWIIKNSWGEDWGENGFLRVRRNVN----ACGLLNE 359          
BLAST of DC900201 vs. ExPASy Swiss-Prot
Match: LMCPA_LEIME (Cysteine proteinase A OS=Leishmania mexicana GN=LMCPA PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 6.434e-32
Identity = 85/209 (40.67%), Postives = 111/209 (53.11%), Query Frame = 1
Query:   16 CGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKK--GGVTTEAKYPYQANDGTCD-VSKESSPAVSIDGHENVPANHEDALLKAVAKQPVSVAIDAGSSDFQFYSEGVFTGECGTELNHGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAMEASYPIKKSATNPTGP 633
            CGSCWAFS I  +EG      + LVSLSEQ LV CD + ++GCNGGLM+ A  +I +   G V TEA YPY +  GT      E      I G  ++P + E        + PV+VA+DA  + +Q Y  GV +      LNHGV  VG+        YWIV+NSWG  WGEKGYIR+  G +         M  +YP+  +  +P  P
Sbjct:  150 CGSCWAFSAIGNIEGQWAASGHSLVSLSEQMLVSCD-NIDEGCNGGLMDQAMNWIMQSHNGSVFTEASYPYTSGGGTRPPCHDEGEVGAKITGFLSLPHDEERIAEWVEKRGPVAVAVDA--TTWQLYFGGVVSLCLAWSLNHGVLIVGFNKNAK-PPYWIVKNSWGSSWGEKGYIRLAMGSNQ-------CMLKNYPVSATVESPHTP 347          
BLAST of DC900201 vs. ExPASy Swiss-Prot
Match: CYSP1_LEIPI (Cysteine proteinase 1 OS=Leishmania pifanoi GN=CYS1 PE=2 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 6.434e-32
Identity = 85/209 (40.67%), Postives = 111/209 (53.11%), Query Frame = 1
Query:   16 CGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKK--GGVTTEAKYPYQANDGTCD-VSKESSPAVSIDGHENVPANHEDALLKAVAKQPVSVAIDAGSSDFQFYSEGVFTGECGTELNHGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAMEASYPIKKSATNPTGP 633
            CGSCWAFS I  +EG      + LVSLSEQ LV CD + ++GCNGGLM+ A  +I +   G V TEA YPY +  GT      E      I G  ++P + E        + PV+VA+DA  + +Q Y  GV +      LNHGV  VG+        YWIV+NSWG  WGEKGYIR+  G +         M  +YP+  +  +P  P
Sbjct:  150 CGSCWAFSAIGNIEGQWAASGHSLVSLSEQMLVSCD-NIDEGCNGGLMDQAMNWIMQSHNGSVFTEASYPYTSGGGTRPPCHDEGEVGAKITGFLSLPHDEERIAEWVEKRGPVAVAVDA--TTWQLYFGGVVSLCLAWSLNHGVLIVGFNKNAK-PPYWIVKNSWGSSWGEKGYIRLAMGSNQ-------CMLKNYPVSATVESPHTP 347          
BLAST of DC900201 vs. ExPASy Swiss-Prot
Match: CATV_NPVST (Viral cathepsin OS=Spodoptera litura multicapsid nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 6.434e-32
Identity = 84/192 (43.75%), Postives = 107/192 (55.73%), Query Frame = 1
Query:   16 CGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANHEDALLKAVAKQ-PVSVAIDAGSSDFQFYSEGVFTGECGTELNHGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAME 588
            CGSCWAF+ I  +E    IM + L+ LSEQ+L+DCD   +QGC+GGLM LAF+ I + GGV  E  YPYQ  +  C ++  S  AV +          E  LL+ + K  P++VAID    D   Y  G+ T      LNH V  VGYG   D T YWI +NSWG  WGE GY R +R I+     CG+  E
Sbjct:  147 CGSCWAFAAIGNIESQYAIMHDSLIDLSEQQLLDCDR-VDQGCDGGLMHLAFQEIIRIGGVEHEIDYPYQGIEYACRLA-PSKLAVRLSHCYQYDLRDERKLLELLYKNGPIAVAIDC--VDIIDYRSGIATVCNDNGLNHAVLLVGYGIEND-TPYWIFKNSWGSNWGENGYFRARRNIN----ACGMLNE 329          
The following BLAST results are available for this feature:
BLAST of DC900201 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 179
Match NameE-valueIdentityDescription
CATV_NPVLD8.978e-3442.08Viral cathepsin OS=Lymantria dispar multicapsid nu... [more]
CPP3_ENTHI1.531e-3341.18Cysteine proteinase 3 (Fragment) OS=Entamoeba hist... [more]
CATL1_PARTE2.612e-3343.43Cathepsin L 1 OS=Paramecium tetraurelia GN=GSPATT0... [more]
CATV_NPVAH4.456e-3340.21Viral cathepsin OS=Adoxophyes honmai nucleopolyhed... [more]
CATV_NPVHC1.296e-3241.45Viral cathepsin OS=Hyphantria cunea nuclear polyhe... [more]
CPP1_ENTHI2.211e-3240.89Cysteine proteinase 1 OS=Entamoeba histolytica GN=... [more]
CATV_NPVHZ2.211e-3240.10Viral cathepsin OS=Heliothis zea nuclear polyhedro... [more]
LMCPA_LEIME6.434e-3240.67Cysteine proteinase A OS=Leishmania mexicana GN=LM... [more]
CYSP1_LEIPI6.434e-3240.67Cysteine proteinase 1 OS=Leishmania pifanoi GN=CYS... [more]
CATV_NPVST6.434e-3243.75Viral cathepsin OS=Spodoptera litura multicapsid n... [more]

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Properties
Property NameValue
Genbank descriptionDC900201 VSS Citrus sinensis cDNA clone VS28238 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900201 ID=DC900201; Name=DC900201; organism=Citrus sinensis; type=EST; length=804bp
AATTCGGCACGAGAATGCGGTAGCTGCTGGGCTTTTTCAACAATTGCAGC
AGTAGAGGGCATTAATCACATTATGACAAATAAGCTCGTTTCTTTGTCTG
AGCAAGAGTTAGTTGATTGTGACACTGATCAAAACCAAGGATGTAATGGA
GGGCTAATGGAATTGGCATTTGAGTTCATCAAGAAAAAGGGTGGCGTAAC
AACAGAGGCTAAGTACCCTTACCAAGCTAATGATGGAACATGTGACGTTT
CAAAGGAAAGTTCCCCAGCAGTGTCAATTGACGGACATGAAAATGTACCT
GCTAATCACGAGGATGCTCTGCTTAAGGCAGTTGCAAAACAGCCTGTGTC
AGTAGCCATAGATGCCGGCAGTTCAGATTTCCAGTTCTATTCAGAGGGTG
TATTTACTGGAGAATGTGGCACAGAGCTGAATCATGGAGTTGCAGCTGTG
GGCTACGGTACAACACTCGATGGAACCAAGTATTGGATAGTGAGGAACTC
ATGGGGACCTGAATGGGGAGAGAAGGGTTACATCAGAATGCAGCGCGGCA
TCTCAGACAAAAAGGGACTCTGTGGTATTGCAATGGAAGCTTCATATCCC
ATCAAGAAATCTGCAACAAACCCAACAGGACCTTCAGATTATCCTAAGGA
TGAGCTCTAGACACGGTTCACTATTGTCTTTGGCTTTTCTCTGCATTTCA
AGCTCAGCGGTTATCTCTTCTGTGTTAAAGTTGCATGTAATATGCCCTTG
TGATTCATGATTGAATAATGTTTCGATTTATGCAAATAAAGCCAACATTT
TACA
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